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É. Loire · SciRah

Researcher profile · Semantic Scholar

É. Loire

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É. Loire — researcher profile on SciRah

h-index: 18
Works: 48
Citations: 2,412

Most-cited papers

Comparative population genomics in animals uncovers the determinants of genetic diversity
J. Romiguier, P. Gayral, M. Ballenghien, A. Bernard +17 more
2014Nature601 citations
Semantic Scholar
The coupling hypothesis: why genome scans may fail to map local adaptation genes
N. Bierne, J. Welch, É. Loire, F. Bonhomme +1 more
2011Molecular Ecology524 citations Open access
Semantic Scholar
Tick-Bacteria Mutualism Depends on B Vitamin Synthesis Pathways.
O. Duron, Olivier J. X. Morel, Valéries Noël, M. Buysse +7 more
2018Current Biology286 citations Open access
Semantic Scholar
Reference-Free Population Genomics from Next-Generation Transcriptome Data and the Vertebrate–Invertebrate Gap
P. Gayral, J. Melo-Ferreira, S. Glémin, N. Bierne +11 more
2013PLoS Genetics177 citations Open access
Semantic Scholar
The Genomic Basis of Color Pattern Polymorphism in the Harlequin Ladybird
M. Gautier, J. Yamaguchi, J. Foucaud, A. Loiseau +17 more
2018Current Biology106 citations Open access
Semantic Scholar
Population genomics of eusocial insects: the costs of a vertebrate‐like effective population size
J. Romiguier, J. Lourenço, P. Gayral, N. Faivre +8 more
2014Journal of Evolutionary Biology95 citations Open access
Semantic Scholar
Ant phylogenomics reveals a natural selection hotspot preceding the origin of complex eusociality.
J. Romiguier, M. Borowiec, A. Weyna, Quentin Helleu +6 more
2022Current Biology83 citations Open access
Semantic Scholar
DILS: Demographic Inferences with Linked Selection by using ABC
C. Fraïsse, I. Popović, Clément Mazoyer, B. Spataro +9 more
2020bioRxiv60 citations Open access
Semantic Scholar
Nanopore-based detection and characterization of yam viruses
D. Filloux, Emmanuel Fernandez, É. Loire, Lisa Claude +7 more
2018Scientific Reports60 citations Open access
Semantic Scholar
A novel Borrelia species, intermediate between Lyme disease and relapsing fever groups, in neotropical passerine-associated ticks
F. Binetruy, S. Garnier, N. Boulanger, Emilie Talagrand-Reboul +5 more
2020Scientific Reports41 citations Open access
Semantic Scholar
Nonsense-Mediated mRNA Decay Impacts MSI-Driven Carcinogenesis and Anti-Tumor Immunity in Colorectal Cancers
J. El-Bchiri, Agathe Guilloux, P. Dartigues, É. Loire +8 more
2008PLoS ONE41 citations Open access
Semantic Scholar
Population genomics of the endangered giant Galápagos tortoise
É. Loire, Y. Chiari, A. Bernard, V. Cahais +4 more
2013Genome Biology34 citations Open access
Semantic Scholar
One Health compartment analysis of ESBL-producing Escherichia coli reveals multiple transmission events in a rural area of Madagascar
Noellie Gay, Mamitina Alain Noah Rabenandrasana, Harielle Prisca Panandiniaina, Marie Florence Rakotoninidrina +7 more
2023Journal of Antimicrobial Chemotherapy28 citations Open access
Semantic Scholar
Seeking signatures of reinforcement at the genetic level: a hitchhiking mapping and candidate gene approach in the house mouse
C. Smadja, É. Loire, P. Caminade, Marios Thoma +6 more
2015Molecular Ecology27 citations Open access
Semantic Scholar
Evolution of Attenuation and Risk of Reversal in Peste des Petits Ruminants Vaccine Strain Nigeria 75/1
R. Eloiflin, M. Boyer, O. Kwiatek, S. Guendouz +4 more
2019Viruses26 citations Open access
Semantic Scholar
Evolution of Coding Microsatellites in Primate Genomes
É. Loire, D. Higuet, P. Netter, G. Achaz
2013Genome Biology and Evolution26 citations Open access
Semantic Scholar
Immunomodulatory Effects of Amblyomma variegatum Saliva on Bovine Cells: Characterization of Cellular Responses and Identification of Molecular Determinants
V. Rodrigues, Bernard Fernandez, Arthur Vercoutere, Léo Chamayou +10 more
2018Frontiers in Cellular and Infection Microbiology20 citations Open access
Semantic Scholar
Hypermutability of genes in Homo sapiens due to the hosting of long mono-SSR.
É. Loire, F. Praz, D. Higuet, P. Netter +1 more
2008Molecular biology and evolution20 citations Open access
Semantic Scholar
Characterisation of chicken farms in Vietnam: A typology of antimicrobial use among different production systems.
C. Bâtie, Le Thi Thu Ha, É. Loire, Dinh Bao Truong +4 more
2022Preventive Veterinary Medicine17 citations Open access
Semantic Scholar
A participatory epidemiological and One Health approach to explore the community’s capacity to detect emerging zoonoses and surveillance network opportunities in the forest region of Guinea
M. Guenin, H. D. De Nys, M. Peyre, É. Loire +4 more
2022PLoS Neglected Tropical Diseases16 citations Open access
Semantic Scholar
Identification of Eilat virus and prevalence of infection among Culex pipiens L. populations, Morocco, 2016.
A. Bennouna, P. Gil, H. el Rhaffouli, Antoni Exbrayat +5 more
2019Virology16 citations Open access
Semantic Scholar
A library preparation optimized for metagenomics of RNA viruses
P. Gil, Virginie Dupuy, Rachid Koual, Antoni Exbrayat +15 more
2021Molecular Ecology Resources15 citations
Semantic Scholar
Do changes in gene expression contribute to sexual isolation and reinforcement in the house mouse?
É. Loire, Sergio Tusso, P. Caminade, D. Séverac +3 more
2017Molecular Ecology14 citations Open access
Semantic Scholar
Spatial scale influences the distribution of viral diversity in the eukaryotic virome of the mosquito Culex pipiens
P. Gil, Antoni Exbrayat, É. Loire, I. Rakotoarivony +27 more
2023Virus Evolution13 citations Open access
Semantic Scholar
The Genome Segments of Bluetongue Virus Differ in Copy Number in a Host-Specific Manner
Y. Moreau, P. Gil, Antoni Exbrayat, I. Rakotoarivony +9 more
2020Journal of Virology12 citations Open access
Semantic Scholar
A whole-genome worldwide molecular epidemiology approach for contagious caprine pleuropneumonia
É. Loire, A. I. Ibrahim, L. Manso-Silván, L. Lignereux +1 more
2020Heliyon11 citations Open access
Semantic Scholar
In vitro shared transcriptomic responses of Aedes aegypti to arboviral infections: example of dengue and Rift Valley fever viruses
S. Licciardi, É. Loire, E. Cardinale, Marie Gislard +2 more
2020Parasites & Vectors11 citations Open access
Semantic Scholar
Habitat characteristics and species interference influence space use and nest‐site occupancy: implications for social variation in two sister species
Claire M. S. Dufour, N. Pillay, N. Avenant, J. Watson +2 more
2018Oikos10 citations Open access
Semantic Scholar
Host influence on the eukaryotic virome of sympatric mosquitoes and abundance of diverse viruses with a broad host range
Côme Morel, Patricia Gil, Antoni Exbrayat, É. Loire +9 more
2023bioRxiv6 citations Open access
Semantic Scholar
Lacking conservation genomics in the giant Galápagos tortoise
É. Loire, N. Galtier
2017bioRxiv6 citations Open access
Semantic Scholar
Divergence of olfactory receptors associated with the evolution of assortative mating and reproductive isolation in mice
C. Smadja, É. Loire, P. Caminade, D. Séverac +2 more
2022bioRxiv3 citations Open access
Semantic Scholar
Preserving microsatellites? Conservation genetics of the giant Galápagos tortoise
É. Loire, N. Galtier
20173 citations Open access
Semantic Scholar
Population genomics of the endangered giant Galápagos tortoise
É. Loire, Y. Chiari, A. Bernard, V. Cahais +4 more
2013Genome Biology3 citations Open access
Semantic Scholar
One Health Genomic Surveillance Reveals Multiple Cross-Reservoirs Transmission Events of Extended-Spectrum β-Lactamase-Producing Escherichia Coli in a Rural Area of Madagascar
Noellie Gay, Mamitina Alain Noah Rabenandrasana, Harielle Prisca Panandiniaina, Marie Florence Rakotoninidrina +7 more
2022Social Science Research Network2 citations Open access
Semantic Scholar
Background-invariant re-identification of dogs from camera-trap videos in non-controlled environments
Eugênio Dias Ribeiro, Cyril Barrelet, Marc Chaumont, Gérard Subsol +11 more
2025Ecological Informatics1 citations Open access
Semantic Scholar
Characterisation of Chicken Farms in Vietnam: A Typology of Antimicrobial Use Among Different Production Systems
C. Bâtie, H. Le, É. Loire, Bao D. Truong +4 more
2022Social Science Research Network1 citations Open access
Semantic Scholar
Variations of genes copy number in populations of Bluetongue-virus
Y. Moreau, E. Bréard, P. Gil, É. Loire +1 more
20181 citations
Semantic Scholar
First detection of a Mesonivirus in Culex pipens in five countries around the Mediterranean basin
P. Gil, I. Rakotoarivony, É. Loire, A. Marie +20 more
20171 citations
Semantic Scholar
Limited adaptive mutations but deterministic genome formula variation in bluetongue virus
Y. Moreau, Patricia Gil, Antoni Exbrayat, I. Rakotoarivony +9 more
2026Journal of Virology0 citations Open access
Semantic Scholar
SILVI, an open-source pipeline for T-cell epitope selection
Joana Pissarra, F. Dorkeld, É. Loire, V. Bonhomme +3 more
2022PLoS ONE0 citations Open access
Semantic Scholar
Spatial scale influences taxon conservation in the eukaryotic virome of a mosquito
P. Gil, Antoni Exbrayat, É. Loire, I. Rakotoarivony +26 more
2022bioRxiv0 citations Open access
Semantic Scholar
Spatial scale influences taxon conservation in the eukaryotic virome of a mosquito
Patricia Gil, Antoni Exbrayat, É. Loire, I. Rakotoarivony +24 more
20220 citations
Semantic Scholar
Strengthening the global health dialogue: linking research networks in the Global South
F. Roger, Aurelle de Romémont, A. Binot, É. Loire +1 more
2019Perspective0 citations Open access
Semantic Scholar
Conserved virome diversity and structure in the mosquito vector Culex pipiens. P15
P. Gil, I. Rakotoarivony, É. Loire, A. Marie +20 more
20180 citations
Semantic Scholar
Genomics of sexual isolation and reinforcement in a secondary hybrid zone between two subspecies of the house mouse
C. Smadja, G. Ganem, P. Boursot, P. Caminade +2 more
20180 citations
Semantic Scholar
Influence of host species and habitat on the mosquito virome
S. Gutierrez, P. Gil, A. Fall, B. Biteye +10 more
20180 citations
Semantic Scholar
The virome of the mosquito vector Culex pipiens
P. Gil, I. Rakotoarivony, É. Loire, A. Marie +20 more
20170 citations
Semantic Scholar
Virome characterization of Culex pipiens in France through metagenomic analysis: a new virus discovered. P3
P. Gil, I. Rakotoarivony, G. L'ambert, A. Marie +5 more
20160 citations
Semantic Scholar

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