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S. Sen · SciRah

Researcher profile · Semantic Scholar

S. Sen

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S. Sen — researcher profile on SciRah

h-index: 19
Works: 42
Citations: 4,240

Most-cited papers

Gut microbiome-mediated bile acid metabolism regulates liver cancer via NKT cells
Chi Ma, Miao-Jun Han, B. Heinrich, Qiong Fu +19 more
2018Science1,345 citations Open access
Semantic Scholar
Laboratory mice born to wild mice have natural microbiota and model human immune responses
S. Rosshart, J. Herz, Brian G. Vassallo, Ashli Hunter +22 more
2019Science519 citations Open access
Semantic Scholar
Non-classical immunity controls microbiota impact on skin immunity and tissue repair
Jonathan L. Linehan, O. Harrison, Seong-Ji Han, A. Byrd +18 more
2018Cell419 citations Open access
Semantic Scholar
Human genomic deletions mediated by recombination between Alu elements.
S. Sen, Kyudong Han, Jianxin Wang, Jungnam Lee +6 more
2006American Journal of Human Genetics334 citations Open access
Semantic Scholar
Mobile elements create structural variation: analysis of a complete human genome.
Jinchuan Xing, Yu-Hua Zhang, Kyudong Han, A. Salem +7 more
2009Genome Research321 citations Open access
Semantic Scholar
Commensal-specific T cell plasticity promotes rapid tissue adaptation to injury
O. Harrison, Jonathan L. Linehan, H. Shih, N. Bouladoux +14 more
2018Science283 citations Open access
Semantic Scholar
Genomic rearrangements by LINE-1 insertion-mediated deletion in the human and chimpanzee lineages
Kyudong Han, S. Sen, Jianxin Wang, Pauline A. Callinan +4 more
2005Nucleic Acids Research150 citations Open access
Semantic Scholar
Gene Expression Signatures of Coronary Heart Disease
R. Joehanes, Sai-Xia Ying, T. Huan, Andrew D. Johnson +11 more
2013Arteriosclerosis, Thrombosis and Vascular Biology122 citations Open access
Semantic Scholar
RNA-sequencing of the brain transcriptome implicates dysregulation of neuroplasticity, circadian rhythms and GTPase binding in bipolar disorder
N. Akula, J. Barb, X. Jiang, J. Wendland +12 more
2014Molecular Psychiatry115 citations Open access
Semantic Scholar
Alu Recombination-Mediated Structural Deletions in the Chimpanzee Genome
Kyudong Han, Jungnam Lee, T. Meyer, Jianxin Wang +4 more
2007PLoS Genetics107 citations Open access
Semantic Scholar
Massively parallel sequencing, aCGH, and RNA-Seq technologies provide a comprehensive molecular diagnosis of Fanconi anemia.
S. Chandrasekharappa, Francis P. Lach, Danielle C. Kimble, A. Kamat +9 more
2013Blood93 citations Open access
Semantic Scholar
Endonuclease-independent insertion provides an alternative pathway for L1 retrotransposition in the human genome
S. Sen, C. Huang, Kyudong Han, M. Batzer
2007Nucleic Acids Research77 citations Open access
Semantic Scholar
Synthetic Spike-in Standards Improve Run-Specific Systematic Error Analysis for DNA and RNA Sequencing
J. Zook, D. Samarov, Jennifer McDaniel, S. Sen +1 more
2012PLoS ONE56 citations Open access
Semantic Scholar
An alternative pathway for Alu retrotransposition suggests a role in DNA double-strand break repair
Deepa Srikanta, S. Sen, C. Huang, Erin M. Conlin +2 more
2008Genomics43 citations Open access
Semantic Scholar
NAA10 polyadenylation signal variants cause syndromic microphthalmia
J. Johnston, K. Williamson, Christopher M. Chou, Julie C. Sapp +15 more
2019Journal of Medical Genetics36 citations Open access
Semantic Scholar
Integrative DNA, RNA, and protein evidence connects TREML4 to coronary artery calcification.
S. Sen, Kimberly C. Boelte, J. Barb, R. Joehanes +26 more
2014American Journal of Human Genetics32 citations Open access
Semantic Scholar
TREML4 Promotes Inflammatory Programs in Human and Murine Macrophages and Alters Atherosclerosis Lesion Composition in the Apolipoprotein E Deficient Mouse
Marieli Gonzalez-Cotto, Liang Guo, Megan Karwan, S. Sen +9 more
2020Frontiers in Immunology26 citations Open access
Semantic Scholar
Internal Priming: An opportunistic pathway for L1 & Alu retrotransposition in Hominins
Deepa Srikanta, S. Sen, Erin M. Conlin, M. Batzer
2009Gene24 citations Open access
Semantic Scholar
Genotype-driven identification of a molecular network predictive of advanced coronary calcium in ClinSeq® and Framingham Heart Study cohorts
C. Oguz, S. Sen, Adam R. Davis, Yi-Ping Fu +2 more
2017BMC Systems Biology19 citations Open access
Semantic Scholar
Repair-Mediated Duplication by Capture of Proximal Chromosomal DNA Has Shaped Vertebrate Genome Evolution
John K. Pace, S. Sen, M. Batzer, C. Feschotte
2009PLoS Genetics19 citations Open access
Semantic Scholar
Pendrin localizes to the adrenal medulla and modulates catecholamine release.
Yoskaly Lazo-Fernandez, G. Aguilera, T. Pham, Annie Y Park +13 more
2015American Journal of Physiology. Endocrinology and Metabolism18 citations Open access
Semantic Scholar
Conventional Co-Housing Modulates Murine Gut Microbiota and Hematopoietic Gene Expression
Ji-Chun Chen, Shu-Ling Zhang, Xing-Min Feng, Zhi-Jie Wu +10 more
2020International Journal of Molecular Sciences14 citations Open access
Semantic Scholar
Opportunities for basic, clinical, and bioethics research at the intersection of machine learning and genomics
S. Sen, Eric D. Green, Carolyn M. Hutter, Mark Craven +2 more
2023Cell Genomics12 citations Open access
Semantic Scholar
Identification of candidate genes involved in coronary artery calcification by transcriptome sequencing of cell lines
S. Sen, J. Barb, Praveen F. Cherukuri, David S. Accame +13 more
2014BMC Genomics12 citations Open access
Semantic Scholar
Diversifying the genomic data science research community
Rosa M. Alcazar, Maria Alvarez, Rachel Arnold, Mentewab Ayalew +33 more
2022Genome Research11 citations Open access
Semantic Scholar
Analysis of Ly49 gene transcripts in mature NK cells supports a role for the Pro1 element in gene activation, not gene expression
M. McCullen, Hong-Chuan Li, Maggie Cam, S. Sen +2 more
2016Genes and Immunity10 citations Open access
Semantic Scholar
Computational methods for the analysis of primate mobile elements
R. Cordaux, S. Sen, M. Konkel, M. Batzer
2010Methods in molecular biology9 citations Open access
Semantic Scholar
Attenuation of immune-mediated bone marrow damage in conventionally-housed mice
Jun Li, Wendy D. Dubois, Vishal Thovarai, Zhi-Jie Wu +8 more
2020Molecular Carcinogenesis8 citations Open access
Semantic Scholar
Unearthing soil biodiversity through collaborative genomic research and education
T. Alberts, Claude F. Albritton, Rosa Alcazar, Zainab Aljabri +153 more
2025Nature Genetics3 citations Open access
Semantic Scholar
Abstract PR07: Role of the microbiota in inflammation and lung cancer
A. Robles, T. Cooks, Eleazar Vega-Valle, M. Vetizou +9 more
2018Tumor Microenvironment3 citations
Semantic Scholar
Mucosal-associated invariant T cells respond to cutaneous microbiota
Michael G. Constantinides, Jonathan L. Linehan, S. Sen, J. Shaik +5 more
2017Journal of Immunology3 citations
Semantic Scholar
Abstract 18696: microRNAs Dysregulated in African Americans With Severe Hypertension: Evidences From the Mh-grid Study
Amadou Gaye, S. Davis, Adam R. Davis, S. Sen +1 more
20161 citations
Semantic Scholar
Obituary: Dr. Mark Andrew Batzer
P. Deininger, S. Sherry, Jerilyn A. Walker, Jinchuan Xing +3 more
2026Mobile DNA0 citations Open access
Semantic Scholar
Hidden components of microbiome diversity revealed by cell wall lysis with Adaptive Focused Acoustics
S. Sen, G. Wallace, Sonia Ahluwalia, Vishal Thovarai +2 more
2020bioRxiv0 citations Open access
Semantic Scholar
Cover Image, Volume 59, Issue 2
Jun Yu Li, Wendy D. Dubois, Vishal Thovarai, Zhi-Jie Wu +8 more
2020Journal of Polymer Science0 citations
Semantic Scholar
Abstract PR16: Mucosal-associated invariant T-cells respond to the cutaneous microbiota and promote skin immunity
Michael G. Constantinides, Samira Tamoutounour, Jonathan L. Linehan, S. Sen +4 more
2019Microbiome and Metabolism0 citations
Semantic Scholar
TREML4 affects lesion composition but not calcification in the Apolipoprotein E deficient model of experimental Atherosclerosis
Marieli González Cotto, Liang Guo, Megan Karwan, Erika M. Palmieri +5 more
2018Journal of Immunology0 citations
Semantic Scholar
Machine learning identifies SNPs predictive of advanced coronary artery calcium in ClinSeq® and Framingham Heart Study cohorts
C. Oguz, S. Sen, Adam R. Davis, Yi-Ping Fu +2 more
2017bioRxiv0 citations Open access
Semantic Scholar
Ly49 Pro1 activity is associated with gene activation, not gene expression: Pro1 transcripts are not present in mature Ly49-expressing NK cells.
S. Anderson, M. McCullen, S. Sen, D. McVicar
2016Journal of Immunology0 citations
Semantic Scholar
TREML4 expression by myeloid cells may play a role in coronary artery disease (HUM1P.308)
Kimberly C. Boelte, S. Sen, D. L. Long Priel, K. Lau +21 more
2014Journal of Immunology0 citations
Semantic Scholar
human genome Mobile elements create structural variation : Analysis of a complete Material Supplemental
Jinchuan Xing, Yu-Hua Zhang, Kyudong Han, A. Salem +7 more
20090 citations
Semantic Scholar
Retrotransposon-mediated instability in the human genome
S. Sen
20080 citations Open access
Semantic Scholar

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