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S. Keely · SciRah

Researcher profile · Semantic Scholar

S. Keely

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S. Keely — researcher profile on SciRah

h-index: 26
Works: 86
Citations: 2,546

Most-cited papers

Genetic variation in Pneumocystis carinii isolates from different geographic regions: implications for transmission.
C. Beard, J. Carter, S. Keely, Laurence Huang +16 more
2000Emerging Infectious Diseases249 citations Open access
Semantic Scholar
Genetic variation among Pneumocystis carinii hominis isolates in recurrent pneumocystosis.
S. Keely, J. Stringer, R. Baughman, M. J. Linke +2 more
1995Journal of Infectious Diseases189 citations
Semantic Scholar
Assessment of signs of influenza illness in the ferret model.
P. Reuman, S. Keely, G. M. Schiff
1989Journal of Virological Methods145 citations
Semantic Scholar
Microbial colonization is required for normal neurobehavioral development in zebrafish
D. Phelps, N. E. Brinkman, S. Keely, Emily M. Anneken +6 more
2017Scientific Reports107 citations Open access
Semantic Scholar
Genetics of Surface Antigen Expression inPneumocystis carinii
J. Stringer, S. Keely
2001Infection and Immunity98 citations Open access
Semantic Scholar
Molecular and phenotypic description of Pneumocystis wakefieldiae sp. nov., a new species in rats
M. Cushion, S. Keely, J. Stringer
2004Mycologia83 citations
Semantic Scholar
Host Developmental Toxicity of BPA and BPA Alternatives Is Inversely Related to Microbiota Disruption in Zebrafish
Tara R. Catron, S. Keely, N. E. Brinkman, Todd J. Zurlinden +8 more
2018Toxicological Sciences82 citations
Semantic Scholar
Phylogenetic identification of Pneumocystis murina sp. nov., a new species in laboratory mice.
S. Keely, Jared M. Fischer, M. Cushion, J. Stringer
2004Microbiology82 citations Open access
Semantic Scholar
Retrospective Surveillance of Wastewater To Examine Seasonal Dynamics of Enterovirus Infections
Nichole E. Brinkman, G. Fout, S. Keely
2017Msphere79 citations Open access
Semantic Scholar
Source of Pneumocystis carinii in recurrent episodes of pneumonia in AIDS patients.
S. Keely, Robert P. Baughman, A. Smulian, M. Dohn +1 more
1996AIDS (London)77 citations
Semantic Scholar
Sequences of Pneumocystis carinii f. sp. hominis strains associated with recurrent pneumonia vary at multiple loci
S. Keely, James R. Stringer
1997Journal of Clinical Microbiology76 citations Open access
Semantic Scholar
SARS-CoV-2 monitoring at three sewersheds of different scales and complexity demonstrates distinctive relationships between wastewater measurements and COVID-19 case data
M. Nagarkar, S. Keely, M. Jahne, E. Wheaton +8 more
2021Science of the Total Environment75 citations Open access
Semantic Scholar
Gene Arrays at Pneumocystis carinii Telomeres
S. Keely, H. Renauld, A. Wakefield, M. Cushion +15 more
2005Genetics73 citations Open access
Semantic Scholar
Droplet digital PCR quantification of norovirus and adenovirus in decentralized wastewater and graywater collections: Implications for onsite reuse.
Michael A. Jahne, N. E. Brinkman, S. Keely, B. Zimmerman +2 more
2020Water Research64 citations Open access
Semantic Scholar
A one health approach for monitoring antimicrobial resistance: developing a national freshwater pilot effort
Alison Franklin, Daniel L. Weller, L. Durso, M. Bagley +20 more
2024Frontiers in Water62 citations Open access
Semantic Scholar
Twenty-first century molecular methods for analyzing antimicrobial resistance in surface waters to support One Health assessments.
A. Franklin, N. E. Brinkman, M. Jahne, S. Keely
2021Journal of Microbiological Methods42 citations Open access
Semantic Scholar
Geospatial Patterns of Antimicrobial Resistance Genes in the US EPA National Rivers and Streams Assessment Survey
S. Keely, N. E. Brinkman, E. Wheaton, Michael A. Jahne +7 more
2022Environmental Science and Technology41 citations Open access
Semantic Scholar
Pneumocystis species inferred from analysis of multiple genes.
S. Keely, H. Pai, R. Baughman, C. Sidman +3 more
1994Journal of Eukaryotic Microbiology41 citations
Semantic Scholar
Complexity of the MSG gene family of Pneumocystis carinii
S. Keely, James R. Stringer
2009BMC Genomics38 citations Open access
Semantic Scholar
The development and implementation of a method using blue mussels (Mytilus spp.) as biosentinels of Cryptosporidium spp. and Toxoplasma gondii contamination in marine aquatic environments
Sarah Staggs, S. Keely, M. Ware, Nancy A. Schable +6 more
2015Parasitology Research33 citations
Semantic Scholar
The Pneumocystis carinii drug target S‐adenosyl‐L‐methionine:sterol C‐24 methyl transferase has a unique substrate preference
E. Kaneshiro, Jill A. Rosenfeld, M. Basselin-Eiweida, James R. Stringer +3 more
2002Molecular Microbiology32 citations
Semantic Scholar
Microbiota alter metabolism and mediate neurodevelopmental toxicity of 17β-estradiol
Tara R. Catron, Adam E. Swank, Leah C. Wehmas, D. Phelps +9 more
2019Scientific Reports28 citations Open access
Semantic Scholar
Triclosan-selected host-associated microbiota perform xenobiotic biotransformations in larval zebrafish.
Chelsea A Weitekamp, D. Phelps, Adam E. Swank, James P. McCord +10 more
2019Toxicological Sciences28 citations Open access
Semantic Scholar
Rapid recovery in mice after combined nasal/oral immunization with killed respiratory syncytial virus
P. Reuman, S. Keely, G. M. Schiff
1990Journal of Medical Virology28 citations
Semantic Scholar
Evolution and Speciation of Pneumocystis
S. Keely, Jared M. Fischer, J. Stringer
2003Journal of Eukaryotic Microbiology27 citations
Semantic Scholar
Diversity at the Locus Associated with Transcription of a Variable Surface Antigen of Pneumocystis carinii as an Index of Population Structure and Dynamics in Infected Rats
S. Keely, M. Cushion, J. Stringer
2003Infection and Immunity27 citations Open access
Semantic Scholar
Human mitochondrial DNA and endogenous bacterial surrogates for risk assessment of graywater reuse.
B. Zimmerman, N. Ashbolt, J. Garland, S. Keely +1 more
2014Environmental Science and Technology26 citations Open access
Semantic Scholar
Expression and complexity of the PRT1 multigene family of Pneumocystis carinii.
H. Ambrose, S. Keely, E. Aliouat, Eduardo Dei-Cas +3 more
2004Microbiology25 citations Open access
Semantic Scholar
The Applicability of TaqMan-Based Quantitative Real-Time PCR Assays for Detecting and Enumerating Cryptosporidium spp. Oocysts in the Environment
Sarah Staggs, E. Beckman, S. Keely, Reena R Mackwan +6 more
2013PLoS ONE24 citations Open access
Semantic Scholar
Identification of porcine Pneumocystis carinii as a genetically distinct organism by DNA amplification
Ann E. Wakefield, S. Keely, James R. Stringer, C. B. Christensen +6 more
1997Acta Pathologica, Microbiologica et Immunologica Scandinavica (APMIS)24 citations
Semantic Scholar
Similar subclass antibody responses after intranasal immunization with UV‐inactivated RSV mixed with cholera toxin or live RSV
P. Reuman, S. Keely, G. M. Schiff, James N. Gamble
1991Journal of Medical Virology23 citations
Semantic Scholar
Development of a Risk Characterization Tool for Harmful Cyanobacteria Blooms on the Ohio River
C. Nietch, Leslie Gains-Germain, J. Lazorchak, S. Keely +5 more
2022Water22 citations Open access
Semantic Scholar
Estimating virus occurrence using Bayesian modeling in multiple drinking water systems of the United States.
Eunice A. Varughese, Nichole E. Brinkman, Emily M. Anneken, J. Cashdollar +5 more
2018Science of the Total Environment22 citations Open access
Semantic Scholar
Characterization of the relative importance of human‐ and infrastructure‐associated bacteria in grey water: a case study
S. Keely, N. E. Brinkman, B. Zimmerman, D. Wendell +4 more
2015Journal of Applied Microbiology22 citations Open access
Semantic Scholar
Bringing Community Ecology to Bear on the Issue of Antimicrobial Resistance
A. Banerji, M. Jahne, Michael P. Herrmann, N. E. Brinkman +1 more
2019Frontiers in Microbiology21 citations Open access
Semantic Scholar
Reducing inherent biases introduced during DNA viral metagenome analyses of municipal wastewater
N. E. Brinkman, E. Villegas, J. Garland, S. Keely
2018PLoS ONE20 citations Open access
Semantic Scholar
Human‐ and infrastructure‐associated bacteria in greywater
M. Nagarkar, S. Keely, N. E. Brinkman, J. Garland
2021Journal of Applied Microbiology19 citations Open access
Semantic Scholar
Sequence and structure of the linear mitochondrial genome of Pneumocystis carinii
Thomas M. Sesterhenn, Bradley E. Slaven, S. Keely, A. Smulian +2 more
2009Zeitschrift für Induktive Abstammungs- und Vererbungslehre19 citations
Semantic Scholar
Time between Inoculations and Karyotype Forms ofPneumocystis carinii f. sp. carinii Influence Outcome of Experimental Coinfections in Rats
M. Cushion, Sally Orr, S. Keely, J. Stringer
2001Infection and Immunity19 citations Open access
Semantic Scholar
Evaluation of real-time fluorescence sensors and benchtop fluorescence for tracking and predicting sewage contamination in the Tijuana River Estuary at the US-Mexico border
Natalie Mladenov, Trent W. Biggs, K. Ford, Stephany Garcia +9 more
2024Science of the Total Environment18 citations Open access
Semantic Scholar
Assembly and Annotation of Pneumocystis jirovecii from the Human Lung Microbiome
M. Cushion, S. Keely
2013mBio18 citations Open access
Semantic Scholar
Influenza-specific ELISA IgA and IgG predict severity of influenza disease in subjects prescreened with hemagglutination inhibition.
P. Reuman, David I. Bernstein, S. Keely, James R. Sherwood +2 more
1990Antiviral Research18 citations
Semantic Scholar
Characterization of roof runoff microbial quality in four U.S. cities with varying climate and land use characteristics.
Jumana Alja'fari, S. Sharvelle, N. E. Brinkman, Michael A. Jahne +6 more
2022Water Research17 citations Open access
Semantic Scholar
Monoassociation with bacterial isolates reveals the role of colonization, community complexity and abundance on locomotor behavior in larval zebrafish
Chelsea A Weitekamp, A. Kvasnicka, S. Keely, N. E. Brinkman +7 more
2021Animal Microbiome17 citations Open access
Semantic Scholar
Genetic and antigenic variation in Pneumocystis carinii organisms: tools for examining the epidemiology and pathogenesis of infection.
A. Smulian, S. Keely, S. Sunkin, J. Stringer
1997Journal of Laboratory and Clinical Medicine17 citations
Semantic Scholar
Water, Water Everywhere, but Every Drop Unique: Challenges in the Science to Understand the Role of Contaminants of Emerging Concern in the Management of Drinking Water Supplies
S. Glassmeyer, Emily E Burns, M. Focazio, E. Furlong +7 more
2023GeoHealth15 citations Open access
Semantic Scholar
Pneumocystis murina MSG gene family and the structure of the locus associated with its transcription.
S. Keely, M. J. Linke, M. Cushion, J. Stringer
2007Fungal Genetics and Biology14 citations Open access
Semantic Scholar
Multi‐locus genotype switching in Pneumocystis carinii sp. f. hominis: Evidence for reinfection
S. Keely, James R. Stringer
1996Journal of Eukaryotic Microbiology14 citations
Semantic Scholar
Ohio Coronavirus Wastewater Monitoring Network: implementation of statewide monitoring for protecting public health
Zuzana Bohrerova, N. E. Brinkman, Ritu Chakravarti, Saurabh Chattopadhyay +25 more
2023Journal of Public Health Management and Practice13 citations
Semantic Scholar
Characterizing Spatial Information Loss for Wastewater Surveillance Using crAssphage: Effect of Decay, Temperature, and Population Mobility.
Corinne Wiesner-Friedman, N. E. Brinkman, E. Wheaton, Maitreyi Nagarkar +9 more
2023Environmental Science and Technology12 citations
Semantic Scholar

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