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N. Aben · SciRah

Researcher profile · Semantic Scholar

N. Aben

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N. Aben — researcher profile on SciRah

h-index: 10
Works: 34
Citations: 2,670

Most-cited papers

A Landscape of Pharmacogenomic Interactions in Cancer
F. Iorio, T. Knijnenburg, D. Vis, G. Bignell +35 more
2016Cell1,910 citations Open access
Semantic Scholar
Effective drug combinations in breast, colon and pancreatic cancer cells
P. Jaaks, E. Coker, D. Vis, O. Edwards +24 more
2022Nature391 citations Open access
Semantic Scholar
Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen
M. Menden, Dennis Wang, M. Mason, B. Szalai +350 more
2019Nature Communications321 citations Open access
Semantic Scholar
Genomic Determinants of Protein Abundance Variation in Colorectal Cancer Cells
T. Roumeliotis, Steven P. Williams, E. Gonçalves, Clara Alsinet +20 more
2016bioRxiv103 citations Open access
Semantic Scholar
TANDEM: a two-stage approach to maximize interpretability of drug response models based on multiple molecular data types
N. Aben, D. Vis, M. Michaut, L. Wessels
2016Bioinform.72 citations Open access
Semantic Scholar
Towards Large-Scale Training of Pathology Foundation Models
kaiko.ai, N. Aben, Edwin D. de Jong, Ioannis Gatopoulos +6 more
2024arXiv.org41 citations
Semantic Scholar
Principal component analysis of binary genomics data
Yipeng Song, J. Westerhuis, N. Aben, M. Michaut +2 more
2019Briefings Bioinform.31 citations
Semantic Scholar
Inhibition of the replication stress response is a synthetic vulnerability in SCLC that acts synergistically in combination with cisplatin
Remco Nagel, Ana Teresa Avelar, N. Aben, N. Proost +6 more
2019Molecular Cancer Therapeutics26 citations Open access
Semantic Scholar
Mortality in Severe Human Immunodeficiency Virus-Tuberculosis Associates With Innate Immune Activation and Dysfunction of Monocytes
S. Janssen, C. Schutz, A. Ward, E. Nemes +10 more
2017Clinical Infectious Diseases26 citations Open access
Semantic Scholar
Active WeaSuL: Improving Weak Supervision with Active Learning
Samantha Biegel, Rafah El-Khatib, Luiz Otavio Vilas Boas Oliveira, M. Baak +1 more
2021arXiv.org21 citations
Semantic Scholar
iTOP: inferring the topology of omics data
N. Aben, J. Westerhuis, Yipeng Song, H. Kiers +3 more
2018bioRxiv18 citations Open access
Semantic Scholar
Heterofusion: Fusing genomics data of different measurement scales
A. Smilde, Yipeng Song, J. Westerhuis, H. Kiers +2 more
2019Journal of Chemometrics9 citations Open access
Semantic Scholar
Generalized simultaneous component analysis of binary and quantitative data
Yipeng Song, J. Westerhuis, N. Aben, L. Wessels +2 more
2018Journal of Chemometrics9 citations Open access
Semantic Scholar
A pan-cancer screen identifies drug combination benefit in cancer cell lines at the individual and population level
D. Vis, P. Jaaks, N. Aben, E. Coker +11 more
2024Cell Reports Medicine8 citations Open access
Semantic Scholar
Highlights from the ISCB Student Council Symposia in 2016
B. Cuypers, Annika Jacobsen, B. Siranosian, Kevin Schwahn +9 more
2016F1000Research8 citations Open access
Semantic Scholar
Enhancing Data Completeness in Early Detection Pathway of Prostate Cancer: Integration of a Dashboard-Driven Feedback Tool to Improve Quality of Care
Lucas C. van Maaren, N. Aben, Jolien van Kesteren, V. Struben +13 more
2024Journal of Clinical Medicine3 citations Open access
Semantic Scholar
Identifying biomarkers of anti-cancer drug synergy using multi-task learning
N. Aben, J. D. de Ruiter, Evert Bosdriesz, Yongsoo Kim +4 more
2018bioRxiv2 citations Open access
Semantic Scholar
Validating large language model–assisted data extraction from clinical notes
J. W. van Koevorden, N. Aben, V. Struben, A. Rollings +9 more
2026ESMO real world data and digital oncology1 citations Open access
Semantic Scholar
A screen for combination therapies in BRAF/NRAS wild type melanoma identifies nilotinib plus MEK inhibitor as a synergistic combination
M. Ranzani, K. Kemper, M. Michaut, O. Krijgsman +34 more
2017bioRxiv1 citations Open access
Semantic Scholar
AI-supported first consultation preparation in oncology: a real-world clinical usability study
J. W. van Koevorden, Rachael Mertooetomo, David Neal, B. Celik +9 more
2026npj Digital Medicine0 citations Open access
Semantic Scholar
359P Validating large language model-assisted data extraction from clinical notes in head and neck oncology
J. W. van Koevorden, N. Aben, V. Struben, A. Rollings +9 more
2025ESMO Real World Data and Digital Oncology0 citations Open access
Semantic Scholar
Author response for "Generalized simultaneous component analysis of binary and quantitative data"
Yipeng Song, J. Westerhuis, N. Aben, L. Wessels +2 more
20200 citations Open access
Semantic Scholar
Visualising the complexity of nursing in a humanitarian setting using an app
J. Gilday, Vicky Treacy-Wong, Mohammed Uddin, N. Aben +3 more
20200 citations Open access
Semantic Scholar
Abstract C007: A high-throughput screen to identify effective and translationally-relevant drug combinations for breast, colorectal, and pancreatic cancers
E. Coker, P. Jaaks, D. Vis, N. Aben +5 more
2019Pharmacogenetics, Pharmacogenomics, and Therapeutic Response0 citations Open access
Semantic Scholar
Predicting drug (combination) response through data integration: The whole is greater than the sum of its parts
N. Aben
20190 citations
Semantic Scholar
Multitask VI v1
Julian de, N. Aben
2019protocols.io0 citations Open access
Semantic Scholar
Abstract 1821: Genome-wide genetic screens define the drug resistance landscape of BRAF mutant colon cancer
Jonathan S Brammeld, M. Ranzani, E. Coker, S. Price +16 more
2018Experimental and Molecular Therapeutics0 citations
Semantic Scholar
PO-023 A multi-step framework to analyse high-throughput drug combination screens
P. Jaaks, D. Vis, A. Barthorpe, N. Aben +6 more
2018ESMO Open0 citations Open access
Semantic Scholar
Resource Genomic Determinants of Protein Abundance Variation in Colorectal Cancer Cells
T. Roumeliotis, Steven P. Williams, E. Gonçalves, Clara Alsinet +20 more
20180 citations
Semantic Scholar
Abstract 3717: New therapies for the treatment ofBRAF/NRASwild type melanoma
M. Ranzani, K. Kemper, M. Michaut, O. Krijgsman +26 more
20170 citations
Semantic Scholar
Abstract 4783: Identification of new therapies for the treatment of BRAF/NRAS wild-type melanomas by functional screening approaches
M. Ranzani, M. Michaut, Clara Alsinet, V. Grinkevich +17 more
20160 citations
Semantic Scholar
A large-scale siRNA kinome screen identifies novel synthetic lethal combinations in colorectal cancer
Steven P. Williams, J. Brammeld, N. Aben, M. Michaut +4 more
20160 citations
Semantic Scholar
Resource A Landscape of Pharmacogenomic Interactions in Cancer Graphical Abstract Highlights
F. Iorio, T. Knijnenburg, D. Vis, G. Bignell +35 more
20160 citations
Semantic Scholar
Identification of new therapies for the treatment of BRAF/NRAS wild type melanomas by functional screening approaches: Society for Melanoma Research 2015 Congress
M. Ranzani, M. Michaut, Clara Alsinet, K. Wong +14 more
20150 citations
Semantic Scholar
Identification of genomic markers for drug sensitivity using Multi-task Learning
N. Aben
20140 citations
Semantic Scholar
Graphical application for the statistical analysis of copy number variations in aCGH data
J. D. de Ruiter, C. Melman, R. Korstanje, S. Dentro +1 more
20100 citations
Semantic Scholar

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