Chan Yeong Kim

Most-cited papers

1. TRRUST v2: an expanded reference database of human and mouse transcriptional regulatory interactions

   Heonjong Han, Jae-Won Cho, Sang-Young Lee, Ayoung Yun +16 more

   2017Nucleic Acids Res.1,810 citations Open access

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2. TRRUST: a reference database of human transcriptional regulatory interactions

   Heonjong Han, Hongseok Shim, Donghyun Shin, J. Shim +17 more

   2015Scientific Reports445 citations Open access

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3. HumanNet v2: human gene networks for disease research

   Sohyun Hwang, Chan Yeong Kim, Sunmo Yang, Eiru Kim +3 more

   2018Nucleic Acids Res.189 citations Open access

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4. HumanNet v3: an improved database of human gene networks for disease research

   Chan Yeong Kim, S. Baek, Jun-Ha Cha, Sunmo Yang +4 more

   2021Nucleic Acids Res.130 citations Open access

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5. Human reference gut microbiome catalog including newly assembled genomes from under-represented Asian metagenomes

   Chan Yeong Kim, Muyoung Lee, Sunmo Yang, Kyungnam Kim +3 more

   2021Genome Medicine102 citations Open access

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6. COEXPEDIA: exploring biomedical hypotheses via co-expressions associated with medical subject headings (MeSH)

   Sunmo Yang, Chan Yeong Kim, Sohyun Hwang, Eiru Kim +3 more

   2016Nucleic Acids Res.96 citations Open access

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7. RiceNet v2: an improved network prioritization server for rice genes

   Tak Lee, Taeyun Oh, Sunmo Yang, Junha Shin +7 more

   2015Nucleic Acids Res.85 citations Open access

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8. HiFi metagenomic sequencing enables assembly of accurate and complete genomes from human gut microbiota

   Chan Yeong Kim, Junyeong Ma, Insuk Lee

   2022bioRxiv76 citations Open access

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9. A single gene of a commensal microbe affects host susceptibility to enteric infection

   M. Yoon, Kyung Bae Min, Kang-Mu Lee, Yujin Yoon +9 more

   2016Nature Communications35 citations Open access

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10. Network-assisted investigation of virulence and antibiotic-resistance systems in Pseudomonas aeruginosa

    Sohyun Hwang, Chan Yeong Kim, S. Ji, Junhyeok Go +6 more

    2016Scientific Reports31 citations Open access

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11. GWAB: a web server for the network-based boosting of human genome-wide association data

    J. Shim, Changbae Bang, Sunmo Yang, Tak Lee +5 more

    2017Nucleic Acids Res.30 citations Open access

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12. Function-driven discovery of disease genes in zebrafish using an integrated genomics big data resource

    Hongseok Shim, J. H. Kim, Chan Yeong Kim, Sohyun Hwang +4 more

    2016Nucleic Acids Research25 citations Open access

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13. Network Integrative Genomic and Transcriptomic Analysis of Carbapenem-Resistant Klebsiella pneumoniae Strains Identifies Genes for Antibiotic Resistance and Virulence

    Muyoung Lee, N. Pinto, Chan Yeong Kim, Sunmo Yang +3 more

    2019mSystems22 citations Open access

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14. FlyNet: a versatile network prioritization server for the Drosophila community

    Junha Shin, Sunmo Yang, Eiru Kim, Chan Yeong Kim +6 more

    2015Nucleic Acids Res.15 citations Open access

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15. Functional gene networks based on the gene neighborhood in metagenomes

    Chan Yeong Kim, Insuk Lee

    20179 citations Open access

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16. MRGM: An enhanced catalog of mouse gut microbial genomes substantially broadening taxonomic and functional landscapes

    Nayeon Kim, Chan Yeong Kim, Junyeong Ma, Sunmo Yang +4 more

    2024bioRxiv7 citations Open access

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17. MRGM: an enhanced catalog of mouse gut microbial genomes substantially broadening taxonomic and functional landscapes

    Nayeon Kim, Chan Yeong Kim, Junyeong Ma, Sunmo Yang +4 more

    2024Gut microbes7 citations Open access

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18. Network-based genetic investigation of virulence-associated phenotypes in methicillin-resistant Staphylococcus aureus

    Chan Yeong Kim, Muyoung Lee, Keehoon Lee, S. Yoon +1 more

    2018Scientific Reports7 citations Open access

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19. Exclusive cataloging of near-complete genomes unveils novel functional insights into the human gut microbiome

    Junyeong Ma, Nayeon Kim, Jun Hyung Cha, Wonjong Kim +4 more

    2025bioRxiv3 citations

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20. Human reference gut microbiome comprising 5,414 prokaryotic species, including newly assembled genomes from under-represented Asian metagenomes

    Chan Yeong Kim, Muyoung Lee, Sunmo Yang, Kyungnam Kim +3 more

    2020bioRxiv2 citations Open access

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21. MRGM: a mouse reference gut microbiome reveals a large functional discrepancy for gut bacteria of the same genus between mice and humans

    Nayeon Kim, Chan Yeong Kim, Sunmo Yang, D. Park +2 more

    2021bioRxiv1 citations Open access

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22. Abstract B16: High-resolution metagenomic profiling revealed gut microbiome features for the response to cancer immunotherapy reproducible among multiple cohorts of patients

    Chan Yeong Kim, B. Ahn, M. Hong, Y. Chun +2 more

    20200 citations

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23. Network-based genetic investigation of virulence-associated phenotypes in methicillin-resistant Staphylococcus aureus

    Chan Yeong Kim, Muyoung Lee, Keehoon Lee, S. Yoon +1 more

    2018Scientific Reports0 citations Open access

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