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J. Shillcock · SciRah

Researcher profile · Semantic Scholar

J. Shillcock

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J. Shillcock — researcher profile on SciRah

h-index: 25
Works: 69
Citations: 4,213

Most-cited papers

Reconstruction and Simulation of Neocortical Microcircuitry.
H. Markram, Eilif B. Muller, Srikanth Ramaswamy, Michael W. Reimann +78 more
2015Cell1,425 citations Open access
Semantic Scholar
Tension-induced fusion of bilayer membranes and vesicles
J. Shillcock, R. Lipowsky
2005Nature Materials364 citations Open access
Semantic Scholar
Equilibrium structure and lateral stress distribution of amphiphilic bilayers from dissipative particle dynamics simulations
J. Shillcock, R. Lipowsky
2002315 citations
Semantic Scholar
A Topological Representation of Branching Neuronal Morphologies
Lida Kanari, Paweł Dłotko, M. Scolamiero, R. Levi +3 more
2017Neuroinformatics208 citations Open access
Semantic Scholar
Dissipative particle dynamics simulations of polymersomes.
V. Ortiz, Steven O. Nielsen, D. Discher, M. Klein +2 more
2005Journal of Physical Chemistry B181 citations Open access
Semantic Scholar
The fusion of membranes and vesicles: pathway and energy barriers from dissipative particle dynamics.
A. Grafmüller, J. Shillcock, R. Lipowsky
2009Biophysical Journal171 citations Open access
Semantic Scholar
The neocortical microcircuit collaboration portal: a resource for rat somatosensory cortex
Srikanth Ramaswamy, J. Courcol, Marwan Abdellah, S. Adaszewski +36 more
2015Front. Neural Circuits162 citations Open access
Semantic Scholar
Pathway of membrane fusion with two tension-dependent energy barriers.
A. Grafmüller, J. Shillcock, R. Lipowsky
2007Physical Review Letters151 citations
Semantic Scholar
Improved dissipative particle dynamics simulations of lipid bilayers.
Lianghui Gao, J. Shillcock, R. Lipowsky
2007Journal of Chemical Physics109 citations
Semantic Scholar
Tension-induced vesicle fusion: pathways and pore dynamics.
Lianghui Gao, R. Lipowsky, J. Shillcock
2008Soft Matter100 citations
Semantic Scholar
Mechanism of Shiga Toxin Clustering on Membranes
W. Pezeshkian, Haifei Gao, S. Arumugam, U. Becken +5 more
2016ACS Nano94 citations Open access
Semantic Scholar
Membrane invagination induced by Shiga toxin B-subunit: from molecular structure to tube formation.
W. Pezeshkian, A. G. Hansen, L. Johannes, H. Khandelia +3 more
2016Soft Matter81 citations Open access
Semantic Scholar
The computational route from bilayer membranes to vesicle fusion
J. Shillcock, R. Lipowsky
2006Journal of Physics: Condensed Matter76 citations Open access
Semantic Scholar
Two-component membrane material properties and domain formation from dissipative particle dynamics.
G. Illya, R. Lipowsky, J. Shillcock
2006Journal of Chemical Physics72 citations
Semantic Scholar
Clustering on Membranes: Fluctuations and More.
L. Johannes, W. Pezeshkian, J. Ipsen, J. Shillcock
2018Trends in Cell Biology70 citations Open access
Semantic Scholar
Effect of chain length and asymmetry on material properties of bilayer membranes.
G. Illya, R. Lipowsky, J. Shillcock
2005Journal of Chemical Physics70 citations
Semantic Scholar
Shape fluctuations and elastic properties of two-component bilayer membranes
A. Imparato, J. Shillcock, R. Lipowsky
200456 citations Open access
Semantic Scholar
Spontaneous vesicle self-assembly: a mesoscopic view of membrane dynamics.
J. Shillcock
2012Langmuir52 citations Open access
Semantic Scholar
Computational synthesis of cortical dendritic morphologies
Lida Kanari, Hugo Dictus, Athanassia Chalimourda, Alexis Arnaudon +5 more
2020bioRxiv36 citations Open access
Semantic Scholar
Escape from a metastable well under a time-ramped force.
J. Shillcock, U. Seifert
199832 citations Open access
Semantic Scholar
Wetting, budding, and fusion—morphological transitions of soft surfaces
R. Lipowsky, M. Brinkmann, R. Dimova, Christopher K. Haluska +2 more
200531 citations Open access
Semantic Scholar
Lateral and transverse diffusion in two-component bilayer membranes
A. Imparato, J. Shillcock, R. Lipowsky
2003The European Physical Journal E : Soft matter28 citations
Semantic Scholar
Insight or illusion? Seeing inside the cell with mesoscopic simulations
J. Shillcock
2008HFSP Journal27 citations Open access
Semantic Scholar
Energy dependence of source radii and emission temperatures for 14N induced reactions at E A = 35 MeV
C. B. Chitwood, C. Gelbke, J. Pochodzalla, Z. Chen +6 more
198627 citations
Semantic Scholar
Model biomolecular condensates have heterogeneous structure quantitatively dependent on the interaction profile of their constituent macromolecules
J. Shillcock, Clément Lagisquet, J. Alexandre, L. Vuillon +1 more
2022bioRxiv26 citations Open access
Semantic Scholar
A modeling approach to the self-assembly of the Golgi apparatus.
J. Kühnle, J. Shillcock, O. Mouritsen, M. Weiss
2010Biophysical Journal20 citations Open access
Semantic Scholar
SOFT MATTER : MESOSCOPIC SIMULATIONS OF MEMBRANES , VESICLES AND NANOPARTICLES
J. Shillcock
200719 citations
Semantic Scholar
The effects of globotriaosylceramide tail saturation level on bilayer phases.
W. Pezeshkian, V. Chaban, L. Johannes, J. Shillcock +2 more
2015Soft Matter18 citations Open access
Semantic Scholar
Two-particle correlation functions at small relative momenta for 14N induced reactions on 197Au at E/A = 35 MeV
J. Pochodzalla, C. B. Chitwood, D. J. Fields, C. Gelbke +4 more
198618 citations
Semantic Scholar
Self-assembly of actin monomers into long filaments: Brownian dynamics simulations.
K. Guo, J. Shillcock, R. Lipowsky
2009Journal of Chemical Physics17 citations
Semantic Scholar
Treadmilling of actin filaments via Brownian dynamics simulations.
K. Guo, J. Shillcock, R. Lipowsky
2010Journal of Chemical Physics16 citations
Semantic Scholar
26th Annual Computational Neuroscience Meeting (CNS*2017): Part 3
Adam John Hunter Newton, Alexandra H. Seidenstein, R. McDougal, Alberto Pérez-Cervera +496 more
2017BMC Neuroscience13 citations Open access
Semantic Scholar
Dissipative particle dynamics of tension-induced membrane fusion
A. Grafmüller, J. Shillcock, R. Lipowsky
200913 citations Open access
Semantic Scholar
Nuclear pores and membrane holes: generic models for confined chains and entropic barriers in pore stabilization.
P. Photos, H. Bermudez, H. Aranda-Espinoza, J. Shillcock +1 more
2007Soft Matter13 citations
Semantic Scholar
Coupling Bulk Phase Separation of Disordered Proteins to Membrane Domain Formation in Molecular Simulations on a Bespoke Compute Fabric
J. Shillcock, David B. Thomas, J. Beaumont, Graeme M. Bragg +2 more
2021Membranes11 citations Open access
Semantic Scholar
Macromolecular Crowding Is Surprisingly Unable to Deform the Structure of a Model Biomolecular Condensate
J. Shillcock, David B. Thomas, J. Ipsen, A. Brown
2022bioRxiv10 citations Open access
Semantic Scholar
Reconstructing the brain: from image stacks to neuron synthesis
J. Shillcock, M. Hawrylycz, Sean L. Hill, Hanchuan Peng
2016Brain Informatics10 citations Open access
Semantic Scholar
Vesicles and vesicle fusion: coarse-grained simulations.
J. Shillcock
2013Methods in molecular biology10 citations Open access
Semantic Scholar
Phase behaviour and structure of a model biomolecular condensate.
J. Shillcock, Maelick Brochut, Etienne Chénais, J. Ipsen
2020Soft Matter9 citations Open access
Semantic Scholar
Bio-physically plausible visualization of highly scattering fluorescent neocortical models for in silico experimentation
Marwan Abdellah, A. Bilgili, Stefan Eilemann, J. Shillcock +2 more
2017BMC Bioinformatics9 citations Open access
Semantic Scholar
A Versatile Approach to Stabilize Liquid-Liquid Interfaces using Surfactant Self-Assembly.
Houman Honaryar, Saba Amirfattahi, Duoc Nguyen, Kyungtae Kim +2 more
2024Small8 citations Open access
Semantic Scholar
Quantifying topological invariants of neuronal morphologies
Lida Kanari, Paweł Dłotko, M. Scolamiero, R. Levi +3 more
2016arXiv.org8 citations
Semantic Scholar
Non-monotonic fibril surface occlusion by GFP tags from coarse-grained molecular simulations
J. Shillcock, Janna Hastings, Nathan Riguet, H. Lashuel
2021bioRxiv7 citations Open access
Semantic Scholar
Computational Approaches to Explore Bacterial Toxin Entry into the Host Cell
W. Pezeshkian, J. Shillcock, J. Ipsen
2021Toxins6 citations Open access
Semantic Scholar
Framework for efficient synthesis of spatially embedded morphologies.
L. Vanherpe, Lida Kanari, Guy Atenekeng, Juan Palacios +1 more
2016Physical Review E6 citations Open access
Semantic Scholar
Structure of biomolecular condensates from dissipative particle dynamics simulations
J. Shillcock, Maelick Brochut, Etienne Chénais, J. Ipsen
2019bioRxiv4 citations Open access
Semantic Scholar
POETS: An Event-driven Approach to Dissipative Particle Dynamics
Andrew D. Brown, J. Beaumont, David B. Thomas, J. Shillcock +5 more
2023ACM Transactions on Parallel Computing3 citations Open access
Semantic Scholar
Investigating the morphological transitions in an associative surfactant ternary system.
Houman Honaryar, Jacob A. LaNasa, R. Hickey, J. Shillcock +1 more
2022Soft Matter3 citations Open access
Semantic Scholar
Dissipative Particle Dynamics Simulations of Planar Amphiphilic Bilayers
J. Shillcock, R. Lipowsky
20023 citations
Semantic Scholar
Probing Cellular Dynamics with Mesoscopic Simulations
J. Shillcock
20112 citations
Semantic Scholar

Frequent co-authors

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R. Lipowsky×17
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J. Ipsen×9
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Lida Kanari×7
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F. Schürmann×4

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Eilif B. Muller×3

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