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Satya N. V. Arjunan · SciRah

Researcher profile · Semantic Scholar

Satya N. V. Arjunan

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Satya N. V. Arjunan — researcher profile on SciRah

h-index: 10
Works: 43
Citations: 612

Most-cited papers

Space in systems biology of signaling pathways – towards intracellular molecular crowding in silico
Kouichi Takahashi, Satya N. V. Arjunan, M. Tomita
2005FEBS Letters250 citations Open access
Semantic Scholar
A new multicompartmental reaction-diffusion modeling method links transient membrane attachment of E. coli MinE to E-ring formation
Satya N. V. Arjunan, M. Tomita
2009Journal of Systems and Synthetic Biology90 citations Open access
Semantic Scholar
Prediction of Protein Secondary Structure
Satya N. V. Arjunan, S. Deris, R. Illias
200157 citations Open access
Semantic Scholar
An Evolutionary Firefly Algorithm for the Estimation of Nonlinear Biological Model Parameters
Afnizanfaizal Abdullah, S. Deris, S. Anwar, Satya N. V. Arjunan
2013PLoS ONE41 citations Open access
Semantic Scholar
Particle Simulation of Oxidation Induced Band 3 Clustering in Human Erythrocytes
Hanae Shimo, Satya N. V. Arjunan, H. Machiyama, Taiko Nishino +4 more
2015PLoS Comput. Biol.32 citations Open access
Semantic Scholar
An improved local best searching in Particle Swarm Optimization using Differential Evolution
Afnizanfaizal Abdullah, S. Deris, S. Z. Hashim, M. S. Mohamad +1 more
2011International Conference on Health Information Science21 citations
Semantic Scholar
Surface reaction-diffusion kinetics on lattice at the microscopic scale.
Wei-Xiang Chew, Kazunari Kaizu, M. Watabe, S. Muniandy +2 more
2018Physical Review E17 citations Open access
Semantic Scholar
A Computational Framework for Bioimaging Simulation
M. Watabe, Satya N. V. Arjunan, Seiya Fukushima, Kazunari Iwamoto +5 more
2014PLoS ONE13 citations Open access
Semantic Scholar
Sequential Logic Model Deciphers Dynamic Transcriptional Control of Gene Expressions
Z. Yeo, S. Wong, Satya N. V. Arjunan, Vincent Piras +5 more
1997PLoS ONE13 citations Open access
Semantic Scholar
pSpatiocyte: a high-performance simulator for intracellular reaction-diffusion systems
Satya N. V. Arjunan, Atsushi Miyauchi, K. Iwamoto, Koichi Takahashi
2019BMC Bioinformatics11 citations Open access
Semantic Scholar
Literature Survey of Protein Secondary Structure Prediction
Satya N. V. Arjunan, S. Deris, R. Illias
200110 citations Open access
Semantic Scholar
Modeling reaction-diffusion of molecules on surface and in volume spaces with the E-Cell System
Satya N. V. Arjunan, M. Tomita
20099 citations Open access
Semantic Scholar
Multi-algorithm particle simulations with Spatiocyte
Satya N. V. Arjunan, Koichi Takahashi
2016bioRxiv7 citations Open access
Semantic Scholar
A computational model for water use efficiency in rice production.
M. N. Jaafar, P. Saad, Satya N. V. Arjunan
20006 citations
Semantic Scholar
Reaction-diffusion kinetics on lattice at the microscopic scale
Wei-Xiang Chew, Kazunari Kaizu, M. Watabe, S. Muniandy +2 more
2018Physical Review E5 citations Open access
Semantic Scholar
E-Cell System Version 3: A Software Platform for Integrative Computational Biology
Kouichi Takahashi, T. Sakurada, Kazunari Kaizu, Tomoya Kitayama +9 more
20035 citations
Semantic Scholar
Signaling activations through G-protein-coupled-receptor aggregations.
M. Watabe, Hideaki Yoshimura, Satya N. V. Arjunan, Kazunari Kaizu +1 more
2020Physical Review E4 citations Open access
Semantic Scholar
Simulating macromolecular crowding with particle and lattice-based methods ( Team 3 )
S. Andrews, Satya N. V. Arjunan, G. Balbo, Arne T. Bittig +2 more
20154 citations
Semantic Scholar
Cooperativity transitions driven by higher-order oligomer formations in ligand-induced receptor dimerization.
M. Watabe, Satya N. V. Arjunan, Wei-Xiang Chew, Kazunari Kaizu +1 more
2019Physical Review E3 citations Open access
Semantic Scholar
A Guide to Modeling Reaction-Diffusion of Molecules with the E-Cell System
Satya N. V. Arjunan
20133 citations
Semantic Scholar
Simulation of live-cell imaging system reveals hidden uncertainties in cooperative binding measurements.
M. Watabe, Satya N. V. Arjunan, Wei-Xiang Chew, Kazunari Kaizu +1 more
2018Physical Review E2 citations Open access
Semantic Scholar
Protein secondary structure prediction from amino acid sequence using artificial intelligence technique
Jujukan Asid Amino, Menggunakan Teknik, Kepintaran Buatan, Safaai bin Deris +4 more
20052 citations
Semantic Scholar
Targeted Single-cell Isolation of Spontaneously Escaping Live Melanoma Cells for Comparative Transcriptomics
Jacqueline L. E. Tearle, Satya N. V. Arjunan, Szun S. Tay, Feyza Colakoglu +3 more
2023Cancer Research Communications1 citations Open access
Semantic Scholar
Adaptive fitness in APC-mutant cells requires chromosome rearrangements
Y. Kawasaki, Tomoko Hamaji, Koji Owada, A. Hayashi +33 more
2020bioRxiv1 citations Open access
Semantic Scholar
pSpatiocyte: A Parallel Stochastic Method for Particle Reaction-Diffusion Systems
Atsushi Miyauchi, K. Iwamoto, Satya N. V. Arjunan, Koichi Takahashi
20161 citations
Semantic Scholar
E-Cell System
Satya N. V. Arjunan, P. Dhar, M. Tomita
2013Molecular Biology Intelligence Unit1 citations
Semantic Scholar
A Parallelizing Interface for K-Means Type Clustering Algorithms and Neural Network Batch Training
Satya N. V. Arjunan, S. Deris, R. Illias, M. S. Mohamad
20121 citations
Semantic Scholar
Modeling Three-Dimensional Spatial Regulation of Bacterial Cell Division (Dissertation)
Satya N. V. Arjunan
20101 citations Open access
Semantic Scholar
Protein secondary structure prediction from amino acid sequence using artificial intelligence technique
S. Deris, R. Illias, Satya N. V. Arjunan
20051 citations
Semantic Scholar
Etching a place in the design industry – case of DesignTheme Innoventics
Satya N. V. Arjunan, Prathima Bhat, G. R. Kumar
20210 citations
Semantic Scholar
Accurate Particle-Based Reaction Algorithms for Fixed Timestep Simulators
S. Johnston, C. Angstmann, Satya N. V. Arjunan, C. Beentjes +5 more
20202018 MATRIX Annals0 citations Open access
Semantic Scholar
Multiary complex formations in GPCR signaling activations
M. Watabe, Hideaki Yoshimura, Satya N. V. Arjunan, Kazunari Kaizu +1 more
20200 citations
Semantic Scholar
3P104 Significance of phospholipid composition in generating Min protein waves in vitro(03. Membrane proteins,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))
Satya N. V. Arjunan, Yusuke V. Morimoto, Koichi Takahashi
20140 citations Open access
Semantic Scholar
3P284 一分子計測と一分子粒度細胞シミュレーションの融合(26.計測,ポスター,日本生物物理学会年会第51回(2013年度))
M. Watabe, Satya N. V. Arjunan, Koichi Takahashi
20130 citations
Semantic Scholar
3P284 Development of Fluorescence Microscopy/Spectroscopy Monte Carlo Simulation(26. Measurements,Poster)
M. Watabe, Satya N. V. Arjunan, Koichi Takahashi
20130 citations Open access
Semantic Scholar
BIOINFORMATICS : A TOOL FOR BIO-KNOWLEDGE GENERATION
S. Deris, Hany Alashwal, M. S. Mohamad, Y. L. Chin +8 more
20120 citations
Semantic Scholar
1F1424 Quantitative modeling of protein self-organization behavior during Escherichia coli cell division(Mathematical biology 1,The 49th Annual Meeting of the Biophysical Society of Japan)
Satya N. V. Arjunan, Kouichi Takahashi
20110 citations Open access
Semantic Scholar
2P149 Three-dimensional spatial model of E. coli MinDE with Spatiocyte reveals E-ring as transiently membrane-bound MinE(The 48th Annual Meeting of the Biophysical Society of Japan)
Satya N. V. Arjunan, Koichi Takahashi
20100 citations Open access
Semantic Scholar
In silico models for metabolic systems
K. Selvarajoo, Satya N. V. Arjunan, M. Tomita
20090 citations
Semantic Scholar
Teknologi Malaysia PREDICTION OF PROTEIN SECONDARY STRUCTURE
Satya N. V. Arjunan, S. Deris, R. Illias
20070 citations
Semantic Scholar
A parallelizing interface for k-means type clustering algorithm neural network batch training
Satya N. V. Arjunan, R. Illias, S. Mohammad
20030 citations
Semantic Scholar
Predicting protein secondary structure with neural network and dempster-shafer theory
S. Arjunan, S. Deris, R. Illias, Mohd Saberi +1 more
20030 citations
Semantic Scholar
Protein Secondary Structure Prediction Based on Denoeux Belief Neural Network
Satya N. V. Arjunan, S. Deris, R. Illias
20020 citations
Semantic Scholar

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Koichi Takahashi×12
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Koichi Takahashi — researcher profile on SciRah
S. Deris×10
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S. Deris — researcher profile on SciRah
M. Watabe×9
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M. Watabe — researcher profile on SciRah
M. Tomita×8
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×8

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R. Illias — researcher profile on SciRah

Kazunari Kaizu×8

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Wei-Xiang Chew×5

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Kouichi Takahashi×3

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Kouichi Takahashi — researcher profile on SciRah

M. S. Mohamad×3

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Afnizanfaizal Abdullah×2

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S. Muniandy — researcher profile on SciRah

Koichi Takahashi×2

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Koichi Takahashi — researcher profile on SciRah