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Igor Mandric · SciRah

Researcher profile · Semantic Scholar

Igor Mandric

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Igor Mandric — researcher profile on SciRah

h-index: 12
Works: 29
Citations: 490

Most-cited papers

Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing
Igor Mandric, Jeremy Rotman, H. Yang, N. Strauli +14 more
2020Nature Communications72 citations Open access
Semantic Scholar
QUENTIN: reconstruction of disease transmissions from viral quasispecies genomic data
P. Skums, A. Zelikovsky, Rahul Singh, Walker Gussler +12 more
2018Bioinform.61 citations Open access
Semantic Scholar
ScaffMatch: Scaffolding Algorithm Based on Maximum Weight Matching
Igor Mandric, A. Zelikovsky
2015Annual International Conference on Research in Computational Molecular Biology56 citations Open access
Semantic Scholar
Fast bootstrapping‐based estimation of confidence intervals of expression levels and differential expression from RNA‐Seq data
Igor Mandric, Yvette Temate-Tiagueu, T. Shcheglova, Sahar Al Seesi +2 more
2017Bioinform.50 citations Open access
Semantic Scholar
MiCoP: microbial community profiling method for detecting viral and fungal organisms in metagenomic samples
N. Lapierre, S. Mangul, Mohammed Alser, Igor Mandric +3 more
2018BMC Genomics47 citations Open access
Semantic Scholar
Optimal design of single-cell RNA sequencing experiments for cell-type-specific eQTL analysis
Igor Mandric, Tommer Schwarz, Arunabha Majumdar, Richard K. Perez +4 more
2019bioRxiv45 citations Open access
Semantic Scholar
Benchmarking of computational error-correction methods for next-generation sequencing data
Keith Mitchell, J. Brito, Igor Mandric, Qiaozhen Wu +22 more
2020Genome Biology36 citations Open access
Semantic Scholar
Rrp6 Moonlights in an RNA Exosome-Independent Manner to Promote Cell Survival and Gene Expression during Stress
Charles Wang, Yan-Ru Liu, Samuel DeMario, Igor Mandric +2 more
2020Cell Reports20 citations Open access
Semantic Scholar
Optimized design of single-cell RNA sequencing experiments for cell-type-specific eQTL analysis
Igor Mandric, Tommer Schwarz, Arunabha Majumdar, Kangcheng Hou +8 more
2020Nature Communications19 citations Open access
Semantic Scholar
Comparative transcriptome analysis of Peromyscus leucopus and C3H mice infected with the Lyme disease pathogen
A. Gaber, Igor Mandric, Caroline Nitirahardjo, H. Piontkivska +4 more
2023Frontiers in Cellular and Infection Microbiology16 citations Open access
Semantic Scholar
Inferring metabolic pathway activity levels from RNA-Seq data
Yvette Temate-Tiagueu, Sahar Al Seesi, Meril Mathew, Igor Mandric +7 more
2016BMC Genomics15 citations Open access
Semantic Scholar
Single Cell Transcriptomic Analyses Reveal the Impact of bHLH Factors on Human Retinal Organoid Development
Xiang-Mei Zhang, Igor Mandric, K. Nguyen, Thao T. T. Nguyen +4 more
2021Frontiers in Cell and Developmental Biology12 citations Open access
Semantic Scholar
BATMAN: Fast and Accurate Integration of Single-Cell RNA-Seq Datasets via Minimum-Weight Matching
Igor Mandric, Brian Hill, M. Freund, M. Thompson +1 more
2020bioRxiv11 citations Open access
Semantic Scholar
Repeat aware evaluation of scaffolding tools
Igor Mandric, S. Knyazev, A. Zelikovsky, B. Berger
2017bioRxiv10 citations Open access
Semantic Scholar
Metabolic Analysis of Metatranscriptomic Data from Planktonic Communities
Igor Mandric, S. Knyazev, C. Padilla, F. Stewart +2 more
2017International Symposium on Bioinformatics Research and Applications4 citations
Semantic Scholar
Profiling adaptive immune repertoires across multiple human tissues by RNA Sequencing
S. Mangul, Igor Mandric, A. Zelikovsky, E. Eskin
2018Annual International Conference on Research in Computational Molecular Biology3 citations
Semantic Scholar
Solving scaffolding problem with repeats
Igor Mandric, A. Zelikovsky
2018bioRxiv3 citations Open access
Semantic Scholar
SILP3: Maximum likelihood approach to scaffolding
Igor Mandric, James Lindsay, I. Măndoiu, A. Zelikovsky
2014International Conference on Computational Advances in Bio and Medical Sciences3 citations
Semantic Scholar
Pipeline for Analyzing Activity of Metabolic Pathways in Planktonic Communities Using Metatranscriptomic Data
Filipp Rondel, Akram Sadat Hosseini, Bikram Sahoo, S. Knyazev +6 more
2021J. Comput. Biol.2 citations Open access
Semantic Scholar
Author Correction: Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing
Igor Mandric, Jeremy Rotman, H. Yang, N. Strauli +14 more
2020Nature Communications2 citations Open access
Semantic Scholar
Gerrymandering and fair districting in parallel voting systems
Igor Mandric, Igor Roșca, Radu Buzatu
20202 citations
Semantic Scholar
Estimating Enzyme Participation in Metabolic Pathways for Microbial Communities from RNA-seq Data
Filipp Rondel, Akram Sadat Hosseini, Bikram Sahoo, S. Knyazev +5 more
2020International Symposium on Bioinformatics Research and Applications1 citations
Semantic Scholar
Profiling immunoglobulin repertoires across multiple human tissues by RNA Sequencing
S. Mangul, Igor Mandric, H. Yang, N. Strauli +13 more
2017bioRxiv1 citations Open access
Semantic Scholar
Metabolic pathway activity estimation from RNA-Seq data
Yvette Temate-Tiagueu, Meril Mathew, Igor Mandric, Qiong Cheng +2 more
20151 citations
Semantic Scholar
Single cell transcriptomic analysis reveals the impact of elevating neurogenic factor expression on human retinal organoid development
Xiang-Mei Zhang, Igor Mandric, K. Nguyen, Thao T. T. Nguyen +4 more
2020bioRxiv0 citations Open access
Semantic Scholar
Abstract LB-214: Imputation of single cell cancer genotypes
A. Zelikovsky, Igor Mandric, P. Skums, I. Măndoiu +2 more
2019Bioinformatics, Convergence Science, and Systems Biology0 citations
Semantic Scholar
Benchmarking of computational error-correction methods for next-generation sequencing via unique molecular identifiers
Keith Mitchell, J. Brito, Igor Mandric, Qiaozhen Wu +22 more
2019bioRxiv0 citations Open access
Semantic Scholar
Assembly, quantification, and downstream analysis for high trhoughput sequencing data
Igor Mandric
20180 citations
Semantic Scholar
Title : Profiling adaptive immune repertoires across multiple human tissues by RNA Sequencing
S. Mangul, Igor Mandric, H. Yang, N. Strauli +13 more
20170 citations
Semantic Scholar

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