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H. Harmsen · SciRah

Researcher profile · Semantic Scholar

H. Harmsen

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H. Harmsen — researcher profile on SciRah

h-index: 72
Works: 259
Citations: 27K

Most-cited papers

Short Chain Fatty Acids (SCFAs)-Mediated Gut Epithelial and Immune Regulation and Its Relevance for Inflammatory Bowel Diseases
Daniela Parada-Venegas, Marjorie De la Fuente, G. Landskron, María-Julieta González +5 more
2019Frontiers in Immunology3,550 citations Open access
Semantic Scholar
Corrigendum: Short Chain Fatty Acids (SCFAs)-Mediated Gut Epithelial and Immune Regulation and Its Relevance for Inflammatory Bowel Diseases
Daniela Parada-Venegas, Marjorie De la Fuente, G. Landskron, María-Julieta González +5 more
2019Frontiers in Immunology511 citations Open access
Semantic Scholar
The role of the microbiome for human health: from basic science to clinical applications
M. Mohajeri, R. Brummer, R. Rastall, R. Weersma +3 more
2018European Journal of Nutrition397 citations Open access
Semantic Scholar
Effect of host genetics on the gut microbiome in 7,738 participants of the Dutch Microbiome Project
E. Lopera-Maya, A. Kurilshikov, A. van der Graaf, Shixian Hu +17 more
2022Nature Genetics350 citations Open access
Semantic Scholar
Shared gut, but distinct oral microbiota composition in primary Sjögren's syndrome and systemic lupus erythematosus.
T. A. van der Meulen, H. Harmsen, A. V. Vila, A. Kurilshikov +10 more
2019Journal of Autoimmunity198 citations Open access
Semantic Scholar
The role of gut microbiota in health and disease: In vitro modeling of host-microbe interactions at the aerobe-anaerobe interphase of the human gut.
J. V. von Martels, Mehdi Sadaghian Sadabad, A. Bourgonje, T. Blokzijl +3 more
2017Anaerobe167 citations Open access
Semantic Scholar
Host genetic regulation of human gut microbial structural variation
D. Zhernakova, Dao-Ming Wang, Lei Liu, S. Andreu-Sánchez +31 more
2024Nature161 citations Open access
Semantic Scholar
Talk to your gut: the oral-gut microbiome axis and its immunomodulatory role in the etiology of rheumatoid arthritis.
Marines du Teil Espina, Giorgio Gabarrini, H. Harmsen, J. Westra +2 more
2018FEMS Microbiology Reviews124 citations Open access
Semantic Scholar
Riboflavin Supplementation in Patients with Crohn’s Disease [the RISE-UP study]
J. V. von Martels, A. Bourgonje, M. Klaassen, H. A. Alkhalifah +16 more
2019Journal of Crohn's & Colitis95 citations Open access
Semantic Scholar
Gut microbiome dysbiosis is associated with increased mortality after solid organ transplantation
J. Swarte, Yan-Ni Li, Shixian Hu, J. Björk +26 more
2022Science Translational Medicine87 citations Open access
Semantic Scholar
The interaction between the mucosal immune system and the commensal microflora of the
L. A. van der Waaij, H. Harmsen, M. Madjipour, F. Kroese +5 more
201875 citations
Semantic Scholar
Vitamin C Supplementation in Healthy Individuals Leads to Shifts of Bacterial Populations in the Gut—A Pilot Study
Antonius T. Otten, A. Bourgonje, V. Peters, B. Alizadeh +2 more
2021Antioxidants64 citations Open access
Semantic Scholar
Beyond butyrate: microbial fiber metabolism supporting colonic epithelial homeostasis.
R. R. Fagundes, Saskia C. Belt, Barbara M. Bakker, G. Dijkstra +2 more
2023Trends in Microbiology63 citations Open access
Semantic Scholar
Mucosal host-microbe interactions associate with clinical phenotypes in inflammatory bowel disease
Shixian Hu, A. Bourgonje, R. Gacesa, B. Jansen +12 more
2024Nature Communications58 citations Open access
Semantic Scholar
Author Correction: Effect of host genetics on the gut microbiome in 7,738 participants of the Dutch Microbiome Project
E. Lopera-Maya, A. Kurilshikov, A. van der Graaf, Shixian Hu +18 more
2022Nature Genetics57 citations Open access
Semantic Scholar
Maturation of Gut Microbiota and Circulating Regulatory T Cells and Development of IgE Sensitization in Early Life
T. Ruohtula, M. D. de Goffau, J. Nieminen, J. Honkanen +10 more
2019Frontiers in Immunology57 citations Open access
Semantic Scholar
Marked Changes in Gut Microbiota in Cardio-Surgical Intensive Care Patients: A Longitudinal Cohort Study
H. Aardema, P. Lisotto, A. Kurilshikov, Janneke R. J. Diepeveen +4 more
2020Frontiers in Cellular and Infection Microbiology54 citations Open access
Semantic Scholar
Choice of DNA extraction method affects stool microbiome recovery and subsequent phenotypic association analyses
Asier Fernández-Pato, T. Sinha, R. Gacesa, S. Andreu-Sánchez +13 more
2024Scientific Reports52 citations Open access
Semantic Scholar
The Gut Microbiome Composition Is Altered in Long-Standing Type 1 Diabetes and Associates With Glycemic Control and Disease-Related Complications.
J. V. van Heck, R. Gacesa, R. Stienstra, Jing-Yuan Fu +5 more
2022Diabetes Care51 citations Open access
Semantic Scholar
Riboflavin Supplementation Promotes Butyrate Production in the Absence of Gross Compositional Changes in the Gut Microbiota
Lei Liu, Mehdi Sadaghian Sadabad, Giorgio Gabarrini, P. Lisotto +5 more
2022Antioxidants and Redox Signaling50 citations Open access
Semantic Scholar
Microbiota Induced Changes in the Immune Response in Pregnant Mice
M. Faas, Yuanrui Liu, T. Borghuis, C. V. van Loo-Bouwman +2 more
2020Frontiers in Immunology50 citations Open access
Semantic Scholar
Inulin-grown Faecalibacterium prausnitzii cross-feeds fructose to the human intestinal epithelium
R. R. Fagundes, A. Bourgonje, A. Saeed, Arnau Vich Vila +9 more
2021Gut microbes45 citations Open access
Semantic Scholar
Effects of Different Human Milk Oligosaccharides on Growth of Bifidobacteria in Monoculture and Co-culture With Faecalibacterium prausnitzii
Liang-Hui Cheng, M. B. G. Kiewiet, M. Logtenberg, A. Groeneveld +5 more
2020Frontiers in Microbiology45 citations Open access
Semantic Scholar
Reduced salivary secretion contributes more to changes in the oral microbiome of patients with primary Sjögren’s syndrome than underlying disease
T. A. van der Meulen, H. Harmsen, H. Bootsma, S. Liefers +6 more
2018Annals of the Rheumatic Diseases45 citations Open access
Semantic Scholar
Antibiotic-induced disruption of the microbiome exacerbates chemotherapy-induced diarrhoea and can be mitigated with autologous faecal microbiota transplantation.
H. Wardill, Stijn A. R. van der Aa, A. R. Da Silva Ferreira, R. Havinga +2 more
2021European Journal of Cancer38 citations Open access
Semantic Scholar
Targeted Diet Modification Reduces Multiple Sclerosis–like Disease in Adult Marmoset Monkeys from an Outbred Colony
Y. Kap, Carien Bus-Spoor, N. van Driel, M. Dubbelaar +9 more
2018Journal of Immunology36 citations Open access
Semantic Scholar
Patients With Inflammatory Bowel Disease Show IgG Immune Responses Towards Specific Intestinal Bacterial Genera
A. Bourgonje, G. Roo-Brand, P. Lisotto, Mehdi Sadaghian Sadabad +5 more
2022Frontiers in Immunology34 citations Open access
Semantic Scholar
The gut microbiome across the cardiovascular risk spectrum
F. Prins, V. Collij, H. Groot, J. Björk +10 more
2023bioRxiv32 citations Open access
Semantic Scholar
A Systematic Review on the Effects of Different Types of Probiotics in Animal Alzheimer's Disease Studies
T. D. de Rijke, M. H. Edwina Doting, S. van Hemert, P. de Deyn +3 more
2022Frontiers in Psychiatry28 citations Open access
Semantic Scholar
Translational model of melphalan-induced gut toxicity reveals drug-host-microbe interactions that drive tissue injury and fever
H. Wardill, C. D. de Mooij, A. R. Da Silva Ferreira, I. P. van de Peppel +4 more
2021Cancer Chemotherapy and Pharmacology28 citations Open access
Semantic Scholar
Anaerobic Feces Processing for Fecal Microbiota Transplantation Improves Viability of Obligate Anaerobes
M. Bénard, Iñaki Arretxe, K. Wortelboer, H. Harmsen +6 more
2023Microorganisms26 citations Open access
Semantic Scholar
Distribution, organization and expression of genes concerned with anaerobic lactate-utilization in human intestinal bacteria
P. Sheridan, P. Louis, E. Tsompanidou, S. Shaw +4 more
2021bioRxiv23 citations Open access
Semantic Scholar
Health-related quality of life is linked to the gut microbiome in kidney transplant recipients
J. Swarte, T. Knobbe, J. Björk, R. Gacesa +48 more
2023Nature Communications21 citations Open access
Semantic Scholar
Coenzyme A precursors flow from mother to zygote and from microbiome to host.
Yi Yu, M. van der Zwaag, Jouke Jan Wedman, H. Permentier +14 more
2022Molecules and Cells21 citations Open access
Semantic Scholar
Assessing intestinal permeability in Crohn’s disease patients using orally administered 52Cr-EDTA
J. V. von Martels, A. Bourgonje, H. Harmsen, K. Faber +1 more
2019PLoS ONE21 citations Open access
Semantic Scholar
Analysis of microbial composition and sharing in low-biomass human milk samples: a comparison of DNA isolation and sequencing techniques
Johanne E. Spreckels, Asier Fernández-Pato, Marloes Kruk, A. Kurilshikov +7 more
2023ISME Communications19 citations Open access
Semantic Scholar
Distribution, organization and expression of genes concerned with anaerobic lactate utilization in human intestinal bacteria
P. Sheridan, P. Louis, E. Tsompanidou, S. Shaw +4 more
2022Microbial Genomics19 citations Open access
Semantic Scholar
Prophylactic Treatment with Vitamins C and B2 for Methotrexate-Induced Gastrointestinal Mucositis
A. R. Da Silva Ferreira, H. Wardill, R. Havinga, W. Tissing +1 more
2020Biomolecules19 citations Open access
Semantic Scholar
Multiple indicators of gut dysbiosis predict all-cause and cause-specific mortality in solid organ transplant recipients
J. Swarte, Shu-Yan Zhang, L. M. Nieuwenhuis, R. Gacesa +12 more
2023Gut18 citations Open access
Semantic Scholar
Molecular Characterisation of Vancomycin-Resistant Enterococcus faecium Isolates Belonging to the Lineage ST117/CT24 Causing Hospital Outbreaks
P. Lisotto, N. Couto, S. Rosema, M. Lokate +6 more
2021Frontiers in Microbiology18 citations Open access
Semantic Scholar
The effect of calcium palmitate on bacteria associated with infant gut microbiota
Lu Wang, Gabriela Bravo-Ruiseco, R. Happe, Tao He +2 more
2021MicrobiologyOpen17 citations Open access
Semantic Scholar
Faecalibacterium prausnitzii promotes intestinal epithelial IL-18 production through activation of the HIF1α pathway
R. R. Fagundes, Gabriela Bravo-Ruiseco, Shixian Hu, S. Kierans +5 more
2023Frontiers in Microbiology16 citations Open access
Semantic Scholar
Mucosal host–microbe interactions associate with clinical phenotypes in inflammatory bowel disease
Shixian Hu, A. Bourgonje, R. Gacesa, B. Jansen +12 more
2022bioRxiv16 citations Open access
Semantic Scholar
Whey-based diet containing medium chain triglycerides modulates the gut microbiota and protects the intestinal mucosa from chemotherapy while maintaining therapy efficacy
H. Wardill, A. R. Da Silva Ferreira, Himanshu Kumar, E. Bateman +9 more
2023Cell Death and Disease15 citations Open access
Semantic Scholar
The effect of riboflavin supplementation on the systemic redox status in healthy volunteers: A post-hoc analysis of the RIBOGUT trial.
A. Bourgonje, Antonius T. Otten, Mehdi Sadaghian Sadabad, J. V. von Martels +5 more
2022Free Radical Biology & Medicine14 citations Open access
Semantic Scholar
Gut Microbiota Composition of Biliary Atresia Patients Before Kasai Portoenterostomy Associates With Long-term Outcome
D. V. van Wessel, M. Nomden, J. Bruggink, R. D. de Kleine +4 more
2021Journal of Pediatric Gastroenterology and Nutrition - JPGN14 citations Open access
Semantic Scholar
Pre-therapy fasting slows epithelial turnover and modulates the microbiota but fails to mitigate methotrexate-induced gastrointestinal mucositis
H. Wardill, A. R. Da Silva Ferreira, S. Lichtenberg Cloo, R. Havinga +3 more
2020Gut microbes14 citations Open access
Semantic Scholar
Obesity and diet independently affect maternal immunity, maternal gut microbiota and pregnancy outcome in mice
Lieske Wekema, S. Schoenmakers, N. Schenkelaars, A. Laskewitz +5 more
2024Frontiers in Immunology13 citations Open access
Semantic Scholar
Weight shapes the intestinal microbiome in preterm infants: results of a prospective observational study
Fardou Heida, E. Kooi, J. Wagner, T. Nguyen +5 more
2021BMC Microbiology13 citations Open access
Semantic Scholar
Normal vaginal microbiome in women with primary Sjögren’s syndrome-associated vaginal dryness
T. A. van der Meulen, J. V. vanNimwegen, H. Harmsen, S. Liefers +5 more
2018Annals of the Rheumatic Diseases12 citations Open access
Semantic Scholar

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