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F. Harris · SciRah

Researcher profile · Semantic Scholar

F. Harris

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F. Harris — researcher profile on SciRah

h-index: 14
Works: 45
Citations: 836

Most-cited papers

Identification of independent primary tumors and intrapulmonary metastases using DNA rearrangements in non-small-cell lung cancer.
S. Murphy, M. Aubry, F. Harris, G. Halling +10 more
2014Journal of Clinical Oncology125 citations Open access
Semantic Scholar
Neoantigenic potential of complex chromosomal rearrangements in mesothelioma
A. Mansfield, T. Peikert, J. Smadbeck, J. Udell +22 more
2018Journal of Thoracic Oncology110 citations Open access
Semantic Scholar
Suppression of Somatic Expansion Delays the Onset of Pathophysiology in a Mouse Model of Huntington’s Disease
Helen Budworth, F. Harris, P. Williams, D. Y. Lee +6 more
2015PLoS Genetics84 citations Open access
Semantic Scholar
Using genomics to differentiate multiple primaries from metastatic lung cancer.
S. Murphy, F. Harris, F. Kosari, S. Terra +16 more
2019Journal of Thoracic Oncology71 citations Open access
Semantic Scholar
Chromoplectic TPM3–ALK rearrangement in a patient with inflammatory myofibroblastic tumor who responded to ceritinib after progression on crizotinib
Aaron S. Mansfield, S. Murphy, F. Harris, Steven I. Robinson +8 more
2016Annals of Oncology71 citations Open access
Semantic Scholar
SVAtools for junction detection of genome-wide chromosomal rearrangements by mate-pair sequencing (MPseq).
Sarah Johnson, J. Smadbeck, Stephanie A. Smoley, Athanasios Gaitatzes +13 more
2018Cancer Genetics65 citations
Semantic Scholar
Abstract 440: Quantification of somatic chromosomal rearrangements in circulating cell-free DNA from ovarian cancers
F. Harris, I. Kovtun, J. Smadbeck, F. Multinu +8 more
201651 citations
Semantic Scholar
Integrated analysis of the genomic instability of PTEN in clinically insignificant and significant prostate cancer
S. Murphy, R. Karnes, F. Kosari, B. Edgardo R. Parilla Castellar +12 more
2016Modern Pathology48 citations Open access
Semantic Scholar
Integrated Genomic Analysis of Pancreatic Ductal Adenocarcinomas Reveals Genomic Rearrangement Events as Significant Drivers of Disease
S. Murphy, S. Hart, G. Halling, Sarah Johnson +14 more
2015Cancer Research34 citations Open access
Semantic Scholar
Targeting HER2 in patient‐derived xenograft ovarian cancer models sensitizes tumors to chemotherapy
F. Harris, Pi-Yan Zhang, Lin Yang, X. Hou +4 more
2018Molecular Oncology32 citations Open access
Semantic Scholar
Genomic Rearrangements Define Lineage Relationships between Adjacent Lepidic and Invasive Components in Lung Adenocarcinoma
S. Murphy, D. Wigle, J. Lima, F. Harris +10 more
2014Cancer Research28 citations Open access
Semantic Scholar
Personalized tumor-specific DNA junctions to detect circulating tumor in patients with endometrial cancer
T. Grassi, F. Harris, J. Smadbeck, S. Murphy +13 more
2021PLoS ONE21 citations Open access
Semantic Scholar
Quantification of Somatic Chromosomal Rearrangements in Circulating Cell-Free DNA from Ovarian Cancers
F. Harris, I. Kovtun, J. Smadbeck, F. Multinu +9 more
2016Scientific Reports14 citations Open access
Semantic Scholar
Chromosomal rearrangements and copy number abnormalities of TP63 correlate with p63 protein expression in lung adenocarcinoma
M. Aubry, A. Roden, S. Murphy, G. Vasmatzis +6 more
2015Modern Pathology14 citations
Semantic Scholar
Genomic rearrangements in sporadic lymphangioleiomyomatosis: an evolving genetic story
S. Murphy, S. Terra, F. Harris, A. Nasir +9 more
2017Modern Pathology11 citations Open access
Semantic Scholar
Renin Production by Juxtaglomerular Cell Tumors and Clear Cell Renal Cell Carcinoma and the Role of Angiotensin Signaling Inhibitors
Sounak Gupta, P. Nichols, C. Lohse, F. Kosari +17 more
2022Mayo Clinic proceedings10 citations Open access
Semantic Scholar
Integration of Comprehensive Genomic Analysis and Functional Screening of Affected Molecular Pathways to Inform Cancer Therapy
G. Vasmatzis, Minetta C. Liu, S. Reganti, R. Feathers +11 more
2019Mayo Clinic proceedings10 citations Open access
Semantic Scholar
Shared and unique genomic structural variants of different histological components within testicular germ cell tumours identified with mate pair sequencing
A. Bryce, J. Egan, J. Smadbeck, Sarah Johnson +9 more
2019Scientific Reports7 citations Open access
Semantic Scholar
Large Chromosomal Rearrangements Yield Biomarkers to Distinguish Low‐Risk From Intermediate‐ and High‐Risk Prostate Cancer
G. Vasmatzis, F. Kosari, S. Murphy, S. Terra +15 more
2019Mayo Clinic proceedings7 citations
Semantic Scholar
Epigenomics may begin to explain in vitro differential response to hypomethylating agents in MMR-D hypermethylated endometrial cancer.
L. E. El Khoury, Wan-Hsin Lin, J. Smadbeck, M. Barrett +22 more
2023Epigenomics6 citations
Semantic Scholar
Optimizing clinical cytology touch preparations for next generation sequencing.
S. Murphy, F. Harris, J. Smadbeck, Vishnu Serla +11 more
2020Genomics6 citations Open access
Semantic Scholar
Chromosomal Junction Detection from Whole Genome Sequencing on Formalin-fixed, Paraffin-embedded Tumors.
S. Murphy, J. Smadbeck, B. Eckloff, Y. Lee +16 more
2020Journal of Molecular Diagnostics3 citations Open access
Semantic Scholar
DNA-junction-based personalized liquid biopsy assays could inform management of aggressive endometrial cancer.
F. Harris, L. A. De Vitis, Leah O. Grcevich, I. Capasso +32 more
2025International Journal of Gynecological Cancer2 citations Open access
Semantic Scholar
Theragnostic chromosomal rearrangements in treatment‐naive pancreatic ductal adenocarcinomas obtained via endoscopic ultrasound
S. Murphy, M. Levy, J. Smadbeck, G. Karagouga +9 more
2021Journal of Cellular and Molecular Medicine2 citations Open access
Semantic Scholar
Personalized Tumor-Specific Amplified DNA Junctions in Peripheral Blood of Patients with High-Grade Gliomas
Mohamed F. Ali, C. Riviere-Cazaux, Sarah H. Johnson, Rebecca Salvatori +22 more
2025Clinical Cancer Research1 citations Open access
Semantic Scholar
EXTH-20. IDENTIFICATION OF EX VIVO THERAPEUTIC VULNERABILITIES IN DIFFUSE GLIOMAS USING A FUNCTIONAL GENOMICS APPROACH
Wan-Hsin Lin, J. Smadbeck, M. Barrett, R. Feathers +25 more
2022Neuro-Oncology1 citations Open access
Semantic Scholar
Mate-pair sequencing identifies a cryptic BMPR2 mutation in hereditary pulmonary arterial hypertension
S. Chalmers, S. Murphy, Laura L. Thompson, N. Hoppman +6 more
2020Pulmonary Circulation1 citations Open access
Semantic Scholar
Abstract 13: Individualized approach for ovarian cancer: Identification of potential therapeutic targets based on genomic analyses, testing efficiency of treatments, and monitoring
F. Harris, G. Halling, M. Becker, P. Haluska +2 more
20161 citations
Semantic Scholar
Functional genomics identifies therapeutic options, biomarkers, and resistance mechanisms for high-grade gliomas
Wan-Hsin Lin, F. Kosari, J. Smadbeck, Michael Barrett +33 more
2026bioRxiv0 citations
Semantic Scholar
The Genomic and Transcriptomic Landscape of Recurrent Small Cell Lung Cancer – Pathway Insights and Stratification for Precision Oncology
Angela B. Florio, Mohamed F. Ali, Sarah H. Johnson, F. Harris +16 more
2025Journal of Thoracic Oncology0 citations Open access
Semantic Scholar
Functional impact of the hyperduplication genomophenotype in high copy number endometrial cancer
Angela B. Florio, J. Smadbeck, Sarah H. Johnson, Wan-Hsin Lin +24 more
2024bioRxiv0 citations Open access
Semantic Scholar
Abstract 3391: Dual inhibition of RAS and the IGF2/IGF1R pathways: a potential targeting strategy for RAS-mutated embryonal rhabdomyosarcoma
Dorsay Sadeghian, Wan-Hsin Lin, J. Smadbeck, Alan Panheiter +13 more
2023Cancer Research0 citations
Semantic Scholar
2022-RA-1499-ESGO Differential response of in-vitro mismatch repair-deficient hypermethylated endometrioid endometrial cancer models to DNA-hypomethylating agents
L. E. El Khoury, Wan-Hsin Lin, J. Smadbeck, Dorsay Sadeghian +14 more
2022Endometrial cancer0 citations Open access
Semantic Scholar
Characterization of Genetic Findings Underlying Aggressive B-Cell Lymphomas with Atypical Results on MYC Break-Apart Fluorescence in Situ Hybridization (FISH) Analysis
M. Gagnon, A. Penheiter, Sarah Johnson, J. Smadbeck +12 more
2022Blood0 citations
Semantic Scholar
IN-VITRO MISMATCH REPAIR-DEFICIENT
L. E. El Khoury, J. Smadbeck, Dorsay Sadeghian, J. Cheville +12 more
20220 citations
Semantic Scholar
EPV105/#237 Combination targeted treatment with mek and pan-ERBB inhibitors enhances antitumor activity in erbb amplified ex-vivo serous endometrial cancer cells
A. Larish, W-H Lin, J. Smadbeck, S. Sotiriou +15 more
2021E-Posters0 citations Open access
Semantic Scholar
Combination targeted treatment may enhance antitumor activity in ERBB3 amplified high-grade serous endometrial cancer cells resistant to single agent targeted therapy
A. Larish, Wan-Hsin Lin, J. Smadbeck, M. Barrett +15 more
2021Gynecologic Oncology0 citations
Semantic Scholar
Abstract LB-A19: Targeting ERBB2 pathway in ovarian cancer
I. Kovtun, Pi-Yan Zhang, F. Harris, X. Hou +2 more
20180 citations
Semantic Scholar
9. Detection of fusion genes from complex rearrangements reported by genome-wide mate-pair sequencing (MPseq)
Sarah Johnson, J. Smadbeck, F. Harris, A. Mansfield +3 more
2018Cancer Genetics0 citations
Semantic Scholar
Abstract 5726: Rearrangement-related peptides with neoantigenic potential in malignant pleural mesothelioma
A. Mansfield, T. Peikert, J. Smadbeck, J. Udell +18 more
2018Immunology0 citations
Semantic Scholar
Abstract A34: Targeting genes which are amplified in ovarian cancer
F. Harris, Lin Yang, X. Hou, Konstantinos Leventakos +3 more
20170 citations
Semantic Scholar
Abstract 4814: Testing personalized therapies for ovarian cancer using mate pair genomic analysis and patient-derived xenografts
Konstantinos Leventakos, F. Harris, Lin Yang, X. Hou +2 more
20170 citations Open access
Semantic Scholar
Determining genomic rearrangements in clinical lung specimens for assessment of metastatic disease, actionable targets and disease monitoring
S. Murphy, F. Harris, G. Karagouga, D. Wigle +2 more
20160 citations
Semantic Scholar
Genomic rearrangements in lung adenocarcinoma: Lineage relationships between the in situ and invasive components.
S. Murphy, D. Wigle, F. Harris, J. Lima +8 more
20130 citations
Semantic Scholar
Defining lineage relationships of multiple lung tumors through shared large genomic rearrangements
S. Murphy, D. Wigle, F. Harris, Joema Felipe Lima +8 more
2013European Respiratory Journal0 citations
Semantic Scholar

Frequent co-authors

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G. Vasmatzis×41
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G. Vasmatzis — researcher profile on SciRah
S. Murphy×31
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S. Murphy — researcher profile on SciRah
J. Smadbeck×27
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J. Smadbeck — researcher profile on SciRah
Sarah Johnson×25
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Sarah Johnson — researcher profile on SciRah

×18

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F. Kosari — researcher profile on SciRah

G. Karagouga×16

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G. Karagouga — researcher profile on SciRah

J. Cheville×14

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J. Cheville — researcher profile on SciRah

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M. Aubry — researcher profile on SciRah

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G. Halling — researcher profile on SciRah

P. Anastasiadis×10

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A. Mccune — researcher profile on SciRah

Dorsay Sadeghian×9

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Dorsay Sadeghian — researcher profile on SciRah