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J. Bazil · SciRah

Researcher profile · Semantic Scholar

J. Bazil

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J. Bazil — researcher profile on SciRah

h-index: 22
Works: 85
Citations: 1,308

Most-cited papers

Calcium Overload and Mitochondrial Metabolism
Lauren L. Walkon, Jasiel O. Strubbe-Rivera, J. Bazil
2022Biomolecules177 citations Open access
Semantic Scholar
Temporal and regional intestinal changes in permeability, tight junction, and cytokine gene expression following ovariectomy‐induced estrogen deficiency
Fraser L. Collins, Naiomy D. Rios-Arce, S. Atkinson, Hayley Bierhalter +4 more
2017Physiological Reports73 citations Open access
Semantic Scholar
Catalytic Coupling of Oxidative Phosphorylation, ATP Demand, and Reactive Oxygen Species Generation.
J. Bazil, D. Beard, K. Vinnakota
2016Biophysical Journal69 citations Open access
Semantic Scholar
Modeling Mitochondrial Bioenergetics with Integrated Volume Dynamics
J. Bazil, G. Buzzard, Ann E. Rundell
2010PLoS Comput. Biol.68 citations Open access
Semantic Scholar
The mitochondrial permeability transition phenomenon elucidated by cryo-EM reveals the genuine impact of calcium overload on mitochondrial structure and function
Jasiel O. Strubbe-Rivera, Jason R. Schrad, E. Pavlov, J. Conway +2 more
2020Scientific Reports64 citations Open access
Semantic Scholar
Calcium phosphate precipitation inhibits mitochondrial energy metabolism
Sathyavani Malyala, Yizhu Zhang, Jasiel O. Strubbe, J. Bazil
2019PLoS Comput. Biol.63 citations Open access
Semantic Scholar
A Biophysically-based Mathematical Model for the Catalytic Mechanism of Glutathione Reductase
Venkat R. Pannala, J. Bazil, Amadou K. S. Camara, R. Dash
2013Free Radical Biology & Medicine56 citations Open access
Semantic Scholar
Modeling the Effects of Calcium Overload on Mitochondrial Ultrastructural Remodeling
Jasiel O. Strubbe-Rivera, Jia-Hui Chen, Benjamin A. West, Kristin N. Parent +2 more
2021Applied Sciences40 citations Open access
Semantic Scholar
Depletion of mitochondrial inorganic polyphosphate (polyP) in mammalian cells causes metabolic shift from oxidative phosphorylation to glycolysis
M. E. Solesio, Lihan Xie, B. McIntyre, Mathew Ellenberger +7 more
2021Biochemical Journal37 citations Open access
Semantic Scholar
Human Cardiac 31P-MR Spectroscopy at 3 Tesla Cannot Detect Failing Myocardial Energy Homeostasis during Exercise
A. Bakermans, J. Bazil, A. Nederveen, G. Strijkers +3 more
2017Frontiers in Physiology37 citations Open access
Semantic Scholar
Determining the Origins of Superoxide and Hydrogen Peroxide in the Mammalian NADH: Ubiquinone Oxidoreductase
J. Bazil, Venkat R. Pannala, R. Dash, D. Beard
2014Free Radical Biology & Medicine35 citations Open access
Semantic Scholar
Dynamic buffering of mitochondrial Ca2+ during Ca2+ uptake and Na+-induced Ca2+ release
Christoph A. Blomeyer, J. Bazil, D. Stowe, R. Pradhan +2 more
2012Journal of Bioenergetics and Biomembranes35 citations Open access
Semantic Scholar
Mitochondrial respiratory states and rates
E. Gnaiger, E. A. Frostner, N. A. Karim, N. Abumrad +496 more
201933 citations Open access
Semantic Scholar
Modeling the Calcium Sequestration System in Isolated Guinea Pig Cardiac Mitochondria*
J. Bazil, Christoph A. Blomeyer, R. Pradhan, Amadou K. S. Camara +1 more
2012Journal of Bioenergetics and Biomembranes33 citations Open access
Semantic Scholar
A Global Parallel Model Based Design of Experiments Method to Minimize Model Output Uncertainty
J. Bazil, Gregory T. Buzzard, Ann E. Rundell
2011Bulletin of Mathematical Biology31 citations
Semantic Scholar
Quantification of Mitochondrial Oxidative Phosphorylation in Metabolic Disease: Application to Type 2 Diabetes
Matthew T. Lewis, Jonathan D. Kasper, J. Bazil, J. Frisbee +1 more
2019International Journal of Molecular Sciences29 citations Open access
Semantic Scholar
Computationally modeling mammalian succinate dehydrogenase kinetics identifies the origins and primary determinants of ROS production
N. Manhas, Quynh V. Duong, Pilhwa Lee, Joshua D. Richardson +3 more
2020Journal of Biological Chemistry27 citations Open access
Semantic Scholar
Feedback Regulation and Time Hierarchy of Oxidative Phosphorylation in Cardiac Mitochondria.
K. Vinnakota, J. Bazil, F. Van den Bergh, R. Wiseman +1 more
2016Biophysical Journal27 citations Open access
Semantic Scholar
Identifying Site-Specific Superoxide and Hydrogen Peroxide Production Rates From the Mitochondrial Electron Transport System Using a Computational Strategy
Quynh V. Duong, Yan Levitsky, Maria J Dessinger, Jasiel O. Strubbe-Rivera +1 more
2021bioRxiv26 citations Open access
Semantic Scholar
Mg2+ differentially regulates two modes of mitochondrial Ca2+ uptake in isolated cardiac mitochondria: implications for mitochondrial Ca2+ sequestration
Christoph A. Blomeyer, J. Bazil, D. Stowe, R. Dash +1 more
2016Journal of Bioenergetics and Biomembranes26 citations Open access
Semantic Scholar
A mechanistic mathematical model for the catalytic action of glutathione peroxidase
Venkat R. Pannala, J. Bazil, Amadou K. S. Camara, R. Dash
2014Free radical research25 citations Open access
Semantic Scholar
The very low number of calcium-induced permeability transition pores in the single mitochondrion
M. Neginskaya, Jasiel O. Strubbe, G. Amodeo, Benjamin A. West +3 more
2020The Journal of General Physiology22 citations Open access
Semantic Scholar
The effect of respiration buffer composition on mitochondrial metabolism and function
Lucas C Wollenman, Matthew R. Vander Ploeg, M. Miller, Yizhu Zhang +1 more
2017PLoS ONE22 citations Open access
Semantic Scholar
A Minimal Model for the Mitochondrial Rapid Mode of Ca2+ Uptake Mechanism
J. Bazil, R. Dash
2011PLoS ONE22 citations Open access
Semantic Scholar
Calcium Overload Decreases Net Free Radical Emission in Cardiac Mitochondria
Quynh V. Duong, A. Hoffman, Ka-Tie W. H. Zhong, Maria J Dessinger +2 more
2020Mitochondrion (Amsterdam. Print)21 citations Open access
Semantic Scholar
Analysis of the kinetics and bistability of ubiquinol:cytochrome c oxidoreductase.
J. Bazil, K. Vinnakota, Fan Wu, D. Beard
2013Biophysical Journal21 citations Open access
Semantic Scholar
A Parallel Algorithm for Reverse Engineering of Biological Networks
J. Bazil, F. Qi, D. Beard
2011Integrative Biology18 citations Open access
Semantic Scholar
Sea lamprey cardiac mitochondrial bioenergetics after exposure to TFM and its metabolites.
B. Huerta, Yu-Wen Chung-Davidson, U. Bussy, Yizhu Zhang +2 more
2019Aquatic Toxicology17 citations
Semantic Scholar
A bioenergetic model of the mitochondrial population undergoing permeability transition.
J. Bazil, G. Buzzard, Ann E. Rundell
2010Journal of Theoretical Biology15 citations
Semantic Scholar
Regulation of lipid metabolism in pancreatic beta cells by interferon gamma: A link to anti-viral function.
N. T. T. Trương, Todd A. Lydic, J. Bazil, Abhijeet Suryadevara +1 more
2020Cytokine14 citations
Semantic Scholar
Analysis of a Functional Dimer Model of Ubiquinol Cytochrome c Oxidoreductase
J. Bazil
2017Biophysical Journal12 citations Open access
Semantic Scholar
A biophysical model of the mitochondrial ATP-Mg/P(i) carrier.
Shivendra G. Tewari, R. Dash, D. Beard, J. Bazil
2012Biophysical Journal12 citations Open access
Semantic Scholar
The Inferred Cardiogenic Gene Regulatory Network in the Mammalian Heart
J. Bazil, K. Stamm, Xing Li, Raghuram Thiagarajan +3 more
2013PLoS ONE11 citations Open access
Semantic Scholar
The Role of Swelling in the Regulation of OPA1-Mediated Mitochondrial Function in the Heart In Vitro
Xavier R. Chapa-Dubocq, K. Rodríguez-Graciani, Jorge F. Garcia-Baez, Alyssa C. Vadovsky +2 more
2023Cells10 citations Open access
Semantic Scholar
Global Kinetic Analysis of Mammalian E3 Reveals pH-dependent NAD+/NADH Regulation, Physiological Kinetic Reversibility, and Catalytic Optimum*
M. Moxley, D. Beard, J. Bazil
2015Journal of Biological Chemistry10 citations Open access
Semantic Scholar
A pH-dependent kinetic model of dihydrolipoamide dehydrogenase from multiple organisms.
M. Moxley, D. Beard, J. Bazil
2014Biophysical Journal10 citations Open access
Semantic Scholar
Developing a Physiologically Relevant Cell Model of Ferroptosis in Cardiomyocytes.
Jorge F. Garcia-Baez, Ivana Chaves-Negrón, Sabzali Javadov, J. Bazil +1 more
2025Free Radical Biology & Medicine9 citations Open access
Semantic Scholar
Skeletal Muscle Energetics are Compromised Only During High Intensity Contractions in the Goto-Kakizaki Rat Model of Type 2 Diabetes.
Matthew T. Lewis, Jonathan D. Kasper, J. Bazil, J. Frisbee +1 more
2019American Journal of Physiology. Regulatory Integrative and Comparative Physiology9 citations Open access
Semantic Scholar
Micro-respirometry of whole cells and isolated mitochondria
Yan Levitsky, David J. Pegouske, Sandra S. Hammer, Nathan L. Frantz +7 more
2019RSC Advances7 citations Open access
Semantic Scholar
Measuring Mitochondrial Function: From Organelle to Organism.
Matthew T. Lewis, Yan Levitsky, J. Bazil, R. Wiseman
2022Methods in molecular biology6 citations
Semantic Scholar
Systems-level computational modeling demonstrates fuel selection switching in high capacity running and low capacity running rats
M. Moxley, K. Vinnakota, J. Bazil, Nathan Qi +1 more
2018PLoS Comput. Biol.6 citations Open access
Semantic Scholar
The feasibility of genome-scale biological network inference using Graphics Processing Units
Raghuram Thiagarajan, A. Alavi, J. T. Podichetty, J. Bazil +1 more
2017Algorithms for Molecular Biology6 citations Open access
Semantic Scholar
Crosstalk between adenine nucleotide transporter and mitochondrial swelling: experimental and computational approaches
Xavier R. Chapa-Dubocq, Jorge F. Garcia-Baez, J. Bazil, S. Javadov
2022Cell Biology and Toxicology4 citations Open access
Semantic Scholar
Bioinstrumentation Instruction Through Hybrid Wet/Circuit Laboratory Activities
J. Bazil, Aaron M. Kyle, S. Bhatia, Brain Moerdyk +5 more
20064 citations Open access
Semantic Scholar
Robust Mitochondrial Isolation from Rodent Cardiac Tissue.
Alyssa C. Vadovsky, Melissa Quinn, Tianyi Xia, Yan Levitsky +1 more
2024Journal of Visualized Experiments2 citations
Semantic Scholar
Management of Atrial Fibrillation Post Transcatheter Aortic Valve Implantation.
Sandeep Banga, G. Abela, F. Saltiel, T. Fischell +9 more
2023American Journal of Cardiology2 citations
Semantic Scholar
Abstract 17188: Cryoem Analysis in Cardiac Isolated Mitochondria Reveals New Insights for CsA and mPTP Activation
Jasiel O. Strubbe, Jason R. Schrad, J. Conway, Kristin N. Parent +1 more
2018Circulation2 citations
Semantic Scholar
A perspective on the future of heart failure research
Alyssa C. Vadovsky, Eunji Jeong, Sandeep Banga, J. Bazil
2026Journal of Molecular and Cellular Cardiology Plus1 citations
Semantic Scholar
Connecting developed pressure – preload relationship in ex-vivo beating heart with cellular sarcomere length – tension relationship
Lei Fan, V. Ziaei-Rad, J. Bazil, Lik-Chuan Lee
2025Journal of Biomechanics1 citations Open access
Semantic Scholar
Interferon type II increases lipolysis and fatty acid oxidation in pancreatic β cells
Truong Nguyen, J. Bazil, L. K. Olson
2017The FASEB Journal1 citations Open access
Semantic Scholar

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