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G. Tsiliki · SciRah

Researcher profile · Semantic Scholar

G. Tsiliki

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G. Tsiliki — researcher profile on SciRah

h-index: 16
Works: 63
Citations: 872

Most-cited papers

The eNanoMapper database for nanomaterial safety information
N. Jeliazkova, Charalampos Chomenidis, P. Doganis, B. Fadeel +14 more
2015Beilstein Journal of Nanotechnology126 citations Open access
Semantic Scholar
eNanoMapper: harnessing ontologies to enable data integration for nanomaterial risk assessment
Janna Hastings, N. Jeliazkova, Gareth I. Owen, G. Tsiliki +3 more
2015Journal of Biomedical Semantics103 citations Open access
Semantic Scholar
Integration among databases and data sets to support productive nanotechnology: Challenges and recommendations
S. Karcher, Egon Willighagen, J. Rumble, F. Ehrhart +13 more
2018NanoImpact63 citations Open access
Semantic Scholar
Making use of available and emerging data to predict the hazards of engineered nanomaterials by means of in silico tools: A critical review
Gianpietro Basei, D. Hristozov, L. Lamon, A. Zabeo +4 more
2019NanoImpact59 citations Open access
Semantic Scholar
RRegrs: an R package for computer-aided model selection with multiple regression models
G. Tsiliki, C. Munteanu, J. Seoane, C. Fernandez-Lozano +2 more
2015Journal of Cheminformatics55 citations Open access
Semantic Scholar
A Data Fusion Pipeline for Generating and Enriching Adverse Outcome Pathway Descriptions
P. Nymark, Linda Rieswijk, F. Ehrhart, N. Jeliazkova +7 more
2017Toxicological Sciences50 citations Open access
Semantic Scholar
How can we justify grouping of nanoforms for hazard assessment? Concepts and tools to quantify similarity.
N. Jeliazkova, E. Bleeker, Richard K. Cross, A. Haase +10 more
2021NanoImpact39 citations Open access
Semantic Scholar
Determining nanoform similarity via assessment of surface reactivity by abiotic and in vitro assays.
Didem Ag Seleci, G. Tsiliki, Kai Werle, Derek A Elam +12 more
2022NanoImpact27 citations Open access
Semantic Scholar
Antiviral Stratagems Against HIV-1 Using RNA Interference (RNAi) Technology
D. Vlachakis, G. Tsiliki, A. Pavlopoulou, M. Roubelakis +2 more
2013Evolutionary bioinformatics online27 citations Open access
Semantic Scholar
toxFlow: A Web-Based Application for Read-Across Toxicity Prediction Using Omics and Physicochemical Data
Dimitra-Danai Varsou, G. Tsiliki, P. Nymark, P. Kohonen +2 more
2017Journal of Chemical Information and Modeling22 citations
Semantic Scholar
Population pharmacokinetic reanalysis of a Diazepam PBPK model: a comparison of Stan and GNU MCSim
P. Tsiros, F. Bois, A. Dokoumetzidis, G. Tsiliki +1 more
2019Journal of Pharmacokinetics and Pharmacodynamics20 citations
Semantic Scholar
Jaqpot Quattro: A Novel Computational Web Platform for Modeling and Analysis in Nanoinformatics
Charalampos Chomenidis, Georgios Drakakis, G. Tsiliki, Evangelia Anagnostopoulou +4 more
2017Journal of Chemical Information and Modeling18 citations Open access
Semantic Scholar
Rad9 interacts with Aft1 to facilitate genome surveillance in fragile genomic sites under non-DNA damage-inducing conditions in S. cerevisiae
Christos Andreadis, Christoforos Nikolaou, G. S. Fragiadakis, G. Tsiliki +1 more
2014Nucleic Acids Research18 citations Open access
Semantic Scholar
An Integrated In Silico Approach to Design Specific Inhibitors Targeting Human Poly(A)-Specific Ribonuclease
D. Vlachakis, A. Pavlopoulou, G. Tsiliki, D. Komiotis +3 more
2012PLoS ONE18 citations Open access
Semantic Scholar
Collaborative Mining and Interpretation of Large-Scale Data for Biomedical Research Insights
G. Tsiliki, N. Karacapilidis, Spyros Christodoulou, M. Tzagarakis
2014PLoS ONE17 citations Open access
Semantic Scholar
Fusion methodologies for biomedical data.
G. Tsiliki, S. Kossida
2011Journal of Proteomics17 citations Open access
Semantic Scholar
Structuprint: a scalable and extensible tool for two-dimensional representation of protein surfaces
D. Kontopoulos, D. Vlachakis, G. Tsiliki, Sofia Kossida
2016BMC Structural Biology16 citations Open access
Semantic Scholar
Bayesian based similarity assessment of nanomaterials to inform grouping.
G. Tsiliki, Didem Ag Seleci, A. Zabeo, Gianpietro Basei +7 more
2022NanoImpact13 citations Open access
Semantic Scholar
A Weight of Evidence approach to classify nanomaterials according to the EU Classification, Labelling and Packaging Regulation criteria.
Gianpietro Basei, A. Zabeo, K. Rasmussen, G. Tsiliki +1 more
2021NanoImpact13 citations Open access
Semantic Scholar
Protein signatures using electrostatic molecular surfaces in harmonic space
C. S. Carvalho, D. Vlachakis, G. Tsiliki, V. Megalooikonomou +1 more
2013PeerJ13 citations Open access
Semantic Scholar
Enriching Nanomaterials Omics Data: An Integration Technique to Generate Biological Descriptors
G. Tsiliki, P. Nymark, P. Kohonen, R. Grafström +1 more
201711 citations
Semantic Scholar
Strengthening collaborative data analysis and decision making in web communities
N. Karacapilidis, Spyros Christodoulou, M. Tzagarakis, G. Tsiliki +1 more
2014The Web Conference11 citations
Semantic Scholar
The first eNanoMapper prototype: A substance database to support safe-by-design
N. Jeliazkova, P. Doganis, B. Fadeel, R. Grafström +9 more
2014IEEE International Conference on Bioinformatics and Biomedicine11 citations Open access
Semantic Scholar
Plant Growth on a Mediterranean Green Roof: A Pilot Study on Influence of Substrate Depth, Substrate Composition, and Type of Green Roof
C. Marouli, Pinelopi Savvidou, Maria Koutsokali, P. Papadopoulou +3 more
2022Frontiers in Sustainable Cities10 citations Open access
Semantic Scholar
Ordered weighted average based grouping of nanomaterials with Arsinh and dose response similarity models.
A. Zabeo, Gianpietro Basei, G. Tsiliki, W. Peijnenburg +1 more
2021NanoImpact10 citations Open access
Semantic Scholar
3D Molecular Modelling of the Helicase Enzyme of the Endemic, Zoonotic Greek Goat Encephalitis Virus
D. Vlachakis, G. Tsiliki, S. Kossida
2013International Conference on Engineering Applications of Neural Networks9 citations
Semantic Scholar
Facilitating and Augmenting Collaboration in the Biomedical Domain
N. Karacapilidis, M. Tzagarakis, Spyros Christodoulou, G. Tsiliki
20129 citations
Semantic Scholar
Erratum to: Structuprint: a scalable and extensible tool for two-dimensional representation of protein surfaces
D. Kontopoulos, D. Vlachakis, G. Tsiliki, Sofia Kossida
2016BMC Structural Biology8 citations Open access
Semantic Scholar
On integrating multi-experiment microarray data
G. Tsiliki, D. Vlachakis, S. Kossida
2014Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences7 citations Open access
Semantic Scholar
Grouping of orally ingested silica nanomaterials via use of an integrated approach to testing and assessment to streamline risk assessment
L. Di Cristo, V. Ude, G. Tsiliki, G. Tatulli +8 more
2022Particle and Fibre Toxicology6 citations Open access
Semantic Scholar
Speeding up the drug discovery process: structural similarity searches using molecular surfaces
D. Vlachakis, G. Tsiliki, Dimosthenis Tsagkrasoulis, C. S. Carvalho +2 more
2012EMBnet journal6 citations Open access
Semantic Scholar
Multi-platform Data Integration in Microarray Analysis
G. Tsiliki, M. Zervakis, M. Ioannou, E. Sanidas +4 more
2009IEEE Transactions on Information Technology in Biomedicine6 citations
Semantic Scholar
An Innovative Approach to Enhance Collaboration in the Biomedical Field
G. Tsiliki, M. Tzagarakis, Spyros Christodoulou, S. Kossida +1 more
20135 citations
Semantic Scholar
Bioinformatics approaches in the discovery and understanding of reproduction-related biomarkers
A. Anagnostopoulos, G. Tsiliki, G. Spyrou, G. Tsangaris
2011Espert Review of Proteomics5 citations
Semantic Scholar
The future of structural bioinformatics in the post-genomic era
D. Vlachakis, Dimosthenis Tsagkrasoulis, G. Tsiliki, S. Kossida
20124 citations Open access
Semantic Scholar
A new gene expression signature related to breast cancer estrogen receptor status
Eleni G. Christodoulou, M. Ioannou, M. Kafousi, E. Sanidas +15 more
2008International Conferences on Biological Information and Biomedical Engineering4 citations
Semantic Scholar
Clinico-Genomic Research Assimilator: A Dicode Use Case
G. Tsiliki, S. Kossida
20143 citations
Semantic Scholar
MCDCalc: Markov Chain Molecular Descriptors Calculator for Medicinal Chemistry.
Paula Carracedo-Reboredo, Ramiro Corona, Mikel Martinez-Nunes, C. Fernandez-Lozano +8 more
2019Current Topics in Medicinal Chemistry2 citations Open access
Semantic Scholar
3D structural analysis of proteins using electrostatic surfaces based on image segmentation
D. Vlachakis, Spyridon Champeris Tsaniras, G. Tsiliki, V. Megalooikonomou +1 more
2014Journal of Molecular Biochemistry2 citations
Semantic Scholar
Enhancing Collaboration in Big Biomedical Data Settings - Knowledge Visualization, Data Mining and Decision Making Issues
N. Karacapilidis, G. Tsiliki, M. Tzagarakis
2013International Conference on Data Technologies and Applications2 citations Open access
Semantic Scholar
A computational approach to microarray universal reference sample
G. Tsiliki, Sofia Kaforou, M. Kapsetaki, G. Potamias +1 more
2008International Conferences on Biological Information and Biomedical Engineering2 citations
Semantic Scholar
eNanoMapper – A database and ontology framework for design and safety assessment of nanomaterials
G. Kilic, B. Fadeel, L. Farcal, H. Sarimveis +19 more
20161 citations Open access
Semantic Scholar
eNanoMapper Updates and its Collaborations with the Community #2
Egon Willighagen, G. Tsiliki, P. Kohonen, P. Nymark +10 more
20161 citations
Semantic Scholar
A Data Mining Based Approach for Collaborative Analysis of Biomedical Data
G. Tsiliki, S. Kossida, Natalja Friesen, S. Rüping +2 more
2014Int. J. Artif. Intell. Tools1 citations
Semantic Scholar
AmalgamScope: Merging Annotations Data across the Human Genome
G. Tsiliki, Konstantinos Tsaramirsis, S. Kossida
2014BioMed Research International1 citations Open access
Semantic Scholar
Data Mining Based Collaborative Analysis of Microarray Data
G. Tsiliki, S. Kossida, Natalja Friesen, S. Rüping +2 more
2012IEEE International Conference on Tools with Artificial Intelligence1 citations
Semantic Scholar
Towards a Meaningful Analysis of Big Data - Enhancing Data Mining Techniques through a Collaborative Decision Making Environment
N. Karacapilidis, S. Rüping, G. Tsiliki, M. Tzagarakis
2012International Conference on Data Technologies and Applications1 citations Open access
Semantic Scholar
Facilitating scientific collaboration in data-intensive biomedical settings
N. Karacapilidis, M. Tzagarakis, Spyros Christodoulou, G. Tsiliki
20112011 10th International Workshop on Biomedical Engineering1 citations Open access
Semantic Scholar
Drug repurposing candidates against COVID-19
Georgios Drakakis, Charalampos Chomenidis, G. Tsiliki, A. Dokoumetzidis
20200 citations
Semantic Scholar
Jaqpot: an open source web platform for modelling and model publishing integrated into a safety assessment e-infrastructure
P. Doganis, G. Tsiliki, Charalampos Chomenidis, Angelos Valsamis +3 more
20170 citations Open access
Semantic Scholar

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H. Sarimveis×12
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N. Jeliazkova×10
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D. Vlachakis×10
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N. Karacapilidis

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Egon Willighagen×8

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