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Y. F. Chan · SciRah

Researcher profile · Semantic Scholar

Y. F. Chan

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Y. F. Chan — researcher profile on SciRah

h-index: 21
Works: 61
Citations: 4,931

Most-cited papers

The genomic basis of adaptive evolution in threespine sticklebacks
F. Jones, M. Grabherr, Y. F. Chan, Pamela Russell +29 more
2012Nature1,794 citations Open access
Semantic Scholar
Adaptive evolution of pelvic reduction in sticklebacks by recurrent deletion of a Pitx1 enhancer
Y. F. Chan, M. Marks, F. Jones, Guadalupe Villarreal +12 more
2009Science1,057 citations Open access
Semantic Scholar
A role for a neo-sex chromosome in stickleback speciation
J. Kitano, J. Ross, S. Mori, M. Kume +8 more
2009Nature382 citations Open access
Semantic Scholar
Genetics of ecological divergence during speciation
Matthew E. Arnegard, Matthew D. McGee, B. Matthews, Kerry B. Marchinko +9 more
2014Nature309 citations Open access
Semantic Scholar
A Genome-wide SNP Genotyping Array Reveals Patterns of Global and Repeated Species-Pair Divergence in Sticklebacks
F. Jones, Y. F. Chan, J. Schmutz, J. Grimwood +8 more
2011Current Biology238 citations Open access
Semantic Scholar
Population genomics of parallel phenotypic evolution in stickleback across stream–lake ecological transitions
B. Deagle, F. Jones, Y. F. Chan, D. Absher +2 more
2012Proceedings of the Royal Society of London. Biological Sciences157 citations Open access
Semantic Scholar
Rapid genotype imputation from sequence with reference panels
R. Davies, M. Kučka, Dingwen Su, S. Shi +4 more
2021Nature Genetics92 citations Open access
Semantic Scholar
Parallel selection mapping using artificially selected mice reveals body weight control loci.
Y. F. Chan, F. Jones, E. McConnell, J. Bryk +2 more
2012Current Biology84 citations Open access
Semantic Scholar
Haplotype tagging reveals parallel formation of hybrid races in two butterfly species
J. Meier, Patricio A. Salazar, M. Kučka, R. Davies +10 more
2020Proceedings of the National Academy of Sciences of the United States of America82 citations Open access
Semantic Scholar
The genetic basis of divergent pigment patterns in juvenile threespine sticklebacks
Anna K. Greenwood, F. Jones, Y. F. Chan, S. Brady +6 more
2011Heredity80 citations Open access
Semantic Scholar
Extent of QTL Reuse During Repeated Phenotypic Divergence of Sympatric Threespine Stickleback
Gina L. Conte, Matthew E. Arnegard, Jacob Best, Y. F. Chan +4 more
2015Genetics76 citations Open access
Semantic Scholar
Genetic Architecture of Variation in the Lateral Line Sensory System of Threespine Sticklebacks
A. Wark, M. Mills, Lam-ha T. Dang, Y. F. Chan +8 more
2012G3: Genes, Genomes, Genetics67 citations Open access
Semantic Scholar
An integrative genomic analysis of the Longshanks selection experiment for longer limbs in mice
João P. L. Castro, Michelle N. Yancoskie, Marta Marchini, Stefanie Belohlavy +9 more
2018bioRxiv62 citations Open access
Semantic Scholar
Genetic coupling of female mate choice with polygenic ecological divergence facilitates stickleback speciation
R. Bay, Matthew E. Arnegard, Gina L. Conte, Jacob Best +8 more
2017Current Biology60 citations Open access
Semantic Scholar
A novel enhancer near the Pitx1 gene influences development and evolution of pelvic appendages in vertebrates
Abbey C. Thompson, T. Capellini, C. Guenther, Y. F. Chan +3 more
2018eLife53 citations Open access
Semantic Scholar
Repeated genetic adaptation to altitude in two tropical butterflies
Gabriela Montejo-Kovacevich, J. Meier, C. Bacquet, I. Warren +10 more
2022Nature Communications42 citations Open access
Semantic Scholar
On the origin and structure of haplotype blocks
D. Shipilina, Arka Pal, Sean Stankowski, Y. F. Chan +1 more
2022Molecular Ecology33 citations Open access
Semantic Scholar
Genetic studies of human–chimpanzee divergence using stem cell fusions
J. Song, Rachel L. Grant, Veronica C. Behrens, M. Kučka +4 more
2021Proceedings of the National Academy of Sciences of the United States of America33 citations Open access
Semantic Scholar
Characterization of a non-sexual population of Strongyloides stercoralis with hybrid 18S rDNA haplotypes in Guangxi, Southern China
Siyu Zhou, Xiaoyin Fu, P. Pei, M. Kučka +8 more
2019PLoS Neglected Tropical Diseases30 citations Open access
Semantic Scholar
Genomic Structure of Hstx2 Modifier of Prdm9-Dependent Hybrid Male Sterility in Mice
Diana Lustyk, Slavomír Kinský, K. Ullrich, Michelle N. Yancoskie +7 more
2019Genetics24 citations Open access
Semantic Scholar
Introgression dynamics of sex-linked chromosomal inversions shape the Malawi cichlid radiation
L. M. Blumer, V. Burskaia, I. Artiushin, J. Saha +28 more
2025Science21 citations Open access
Semantic Scholar
A major locus controls a biologically active pheromone component in Heliconius melpomene
K. Byers, Kathy Darragh, Jamie Musgrove, D. A. Almeida +9 more
2019bioRxiv19 citations Open access
Semantic Scholar
Genomics of altitude-associated wing shape in two tropical butterflies
Gabriela Montejo-Kovacevich, Patricio A. Salazar, Sophie H. Smith, Kimberly G. Gavilanes +5 more
2020bioRxiv18 citations Open access
Semantic Scholar
Transposable Element Insertions Are Associated with Batesian Mimicry in the Pantropical Butterfly Hypolimnas misippus
Anna Orteu, M. Kučka, Eunice Katili, Charo Ngumbao +11 more
2023bioRxiv14 citations Open access
Semantic Scholar
Spread of yellow-bill-color alleles favored by selection in the long-tailed finch hybrid system.
Daniel M. Hooper, Callum S Mcdiarmid, Matthew J. Powers, Nicholas M. Justyn +6 more
2024Current Biology13 citations Open access
Semantic Scholar
Genetic mapping of species differences via in vitro crosses in mouse embryonic stem cells
S. Lazzarano, M. Kučka, João P. L. Castro, R. Naumann +8 more
2017Proceedings of the National Academy of Sciences of the United States of America12 citations Open access
Semantic Scholar
Independent evolution toward larger body size in the distinctive Faroe Island mice
Ricardo Wilches, William H. Beluch, E. McConnell, D. Tautz +1 more
2021G311 citations Open access
Semantic Scholar
Population structure of Apodemus flavicollis and comparison to Apodemus sylvaticus in northern Poland based on RAD-seq
M. L. Martin Cerezo, M. Kučka, K. Zub, Y. F. Chan +1 more
2019BMC Genomics11 citations Open access
Semantic Scholar
Genealogical Analysis of Replicate Flower Colour Hybrid Zones in Antirrhinum
Arka Pal, D. Shipilina, A. Le Moan, Adrian J. McNairn +7 more
2025bioRxiv10 citations Open access
Semantic Scholar
S14-03 From trait to base pairs: Parallel evolution of pelvic reduction in three-spined sticklebacks occurs by repeated deletion of a tissue-specific pelvic enhancer at Pitx1
Y. F. Chan, Guadalupe Villarreal, M. Marks, M. Shapiro +12 more
20099 citations Open access
Semantic Scholar
Beyond Mendel: a call to revisit the genotype–phenotype map through new experimental paradigms
D. Tautz, Luisa F. Pallares, Leif Andersson, N. Barghi +19 more
2026Genetics8 citations Open access
Semantic Scholar
Introgression dynamics of sex-linked chromosomal inversions shape the Malawi cichlid adaptive radiation
L. M. Blumer, V. Burskaia, I. Artiushin, J. Saha +28 more
2025bioRxiv8 citations Open access
Semantic Scholar
Repeated genetic adaptation to high altitude in two tropical butterflies
Gabriela Montejo-Kovacevich, J. Meier, C. Bacquet, I. Warren +10 more
2021bioRxiv6 citations Open access
Semantic Scholar
Persistence of an unusual triple sex chromosome system through allopolyploidization in African clawed frogs (Xenopus, subgenus Silurana)
Tharindu Premachandra, V. Gvoždík, E. U. Anele, M. Kučka +6 more
2026Evolution; international journal of organic evolution4 citations Open access
Semantic Scholar
The fourspine stickleback (Apeltes quadracus) has an XY sex chromosome system with polymorphic inversions on both X and Y chromosomes
Zuyao Liu, Amy L. Herbert, Y. F. Chan, M. Kučka +2 more
2024bioRxiv4 citations Open access
Semantic Scholar
Copy number normalization distinguishes differential signals driven by copy number differences in ATAC-seq and ChIP-seq
Dingwen Su, Moritz Peters, Volker Soltys, Y. F. Chan
2024bioRxiv3 citations Open access
Semantic Scholar
Evolution: Two (Very Long) Legs to Stand On
Y. F. Chan
2015Current Biology3 citations Open access
Semantic Scholar
The collision of two genomes threatens global food security
Henry L. North, Gabriela Montejo-Kovacevich, Douglas Amado, Ian A. Warren +7 more
2026bioRxiv2 citations Open access
Semantic Scholar
Interspecies exchange of a mobile genetic element during a plant disease outbreak
D. Evseeva, Y. Pecrix, M. Kučka, Catrin Weiler +7 more
2025bioRxiv2 citations
Semantic Scholar
The fourspine stickleback (Apeltes quadracus) has an XY sex chromosome system with polymorphic inversions on both X and Y chromosomes
Zuyao Liu, Amy L. Herbert, Y. F. Chan, M. Kučka +2 more
2025PLoS Genetics2 citations Open access
Semantic Scholar
Diversifying selection and adaptive introgression of carotenoid-processing genes underlie the evolution of bill color in the long-tailed finch
Daniel M. Hooper, Callum S Mcdiarmid, Matthew J. Powers, Nicholas M. Justyn +6 more
2024bioRxiv2 citations Open access
Semantic Scholar
A Step-by-Step Guide to Assemble a Reptilian Genome.
Asier Ullate-Agote, Y. F. Chan, Athanasia C. Tzika
2017Methods in molecular biology2 citations
Semantic Scholar
Haplotype tagging sheds light on speciation between two divergent cryptic species of the brown algae Ectocarpus
C. Molinier, Lauric Reynes, Y. F. Chan, M. Kučka +10 more
2026bioRxiv1 citations Open access
Semantic Scholar
Rapid and repeated evolution of myosin copy number in threespine stickleback
Alyssa M. Yoxsimer, Rhea R. Daugherty, Emily E. Hare, Y. F. Chan +22 more
2025bioRxiv1 citations Open access
Semantic Scholar
Population Genomics of Giant Mice from the Faroe Islands: Hybridization, Colonization, and a Novel Challenge to Identifying Genomic Targets of Selection
B. Payseur, Peicheng Jing, Emma K. Howell, M. E. Frayer +5 more
2025bioRxiv1 citations Open access
Semantic Scholar
Independent evolution towards large body size in the distinctive Faroe Island mice
Ricardo Wilches, William H. Beluch, E. McConnell, D. Tautz +1 more
2019bioRxiv1 citations Open access
Semantic Scholar
Author response: A novel enhancer near the Pitx1 gene influences development and evolution of pelvic appendages in vertebrates
Abbey C. Thompson, T. Capellini, C. Guenther, Y. F. Chan +3 more
20181 citations Open access
Semantic Scholar
Report ping Array Reveals Patterns of Global and Repeated Species-Pair Divergence in Sticklebacks
F. Jones, Y. F. Chan, J. Schmutz, J. Grimwood +8 more
20121 citations
Semantic Scholar
Flexible and high-throughput simultaneous profiling of gene expression and chromatin accessibility in single cells
Volker Soltys, Moritz Peters, Dingwen Su, M. Kučka +1 more
2026bioRxiv0 citations Open access
Semantic Scholar
Independent major-effect loci and limited trait associations characterise warning colour variation across sexes and life stages in the wood tiger moth (Arctia plantaginis)
Eva L. Koch, Melanie N. Brien, Y. F. Chan, M. Kučka +8 more
2026bioRxiv0 citations Open access
Semantic Scholar

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