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J. Calley · SciRah

Researcher profile · Semantic Scholar

J. Calley

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J. Calley — researcher profile on SciRah

h-index: 16
Works: 41
Citations: 1,013

Most-cited papers

Profilin is required for posterior patterning of the Drosophila oocyte.
Lynn J. Manseau, J. Calley, H. Phan
1996Development151 citations
Semantic Scholar
An Unbiased Approach to Identifying Tau Kinases That Phosphorylate Tau at Sites Associated with Alzheimer Disease
Annalisa Cavallini, S. Brewerton, Amanda J. Bell, Samantha Sargent +11 more
2013Journal of Biological Chemistry121 citations Open access
Semantic Scholar
Large eQTL meta-analysis reveals differing patterns between cerebral cortical and cerebellar brain regions
S. Sieberts, T. Perumal, M. Carrasquillo, M. Allen +17 more
2020Scientific Data108 citations Open access
Semantic Scholar
BrainSeq: Neurogenomics to Drive Novel Target Discovery for Neuropsychiatric Disorders.
C. Schubert, P. O'Donnell, J. Quan, J. Wendland +36 more
2015Neuron101 citations Open access
Semantic Scholar
Genomic characterization of intrinsic and acquired resistance to cetuximab in colorectal cancer patients
Steven M Bray, Jeeyun Lee, S. Kim, J. Hur +17 more
2019Scientific Reports70 citations Open access
Semantic Scholar
The Rat microRNA body atlas; Evaluation of the microRNA content of rat organs through deep sequencing and characterization of pancreas enriched miRNAs as biomarkers of pancreatic toxicity in the rat and dog
Aaron T. Smith, J. Calley, Sachin Mathur, Hui-Rong Qian +10 more
2016BMC Genomics48 citations Open access
Semantic Scholar
Strategic Simulations and Post-Socratic Pedagogy: Constructing Computer Software to Develop Long-Term Inference through Experimental Inquiry
J. Jungck, J. Calley
198548 citations
Semantic Scholar
Identification of genes expressed during Xenopus laevis limb regeneration by using subtractive hybridization
M. King, Trent Nguyen, J. Calley, M. Harty +9 more
2003Developmental Dynamics47 citations
Semantic Scholar
Differential Effects of Estrogen and Raloxifene on Messenger RNA and Matrix Metalloproteinase 2 Activity in the Rat Uterus
L. M. Helvering, M. D. Adrian, A. Geiser, S. T. Estrem +14 more
2005Biology of Reproduction43 citations
Semantic Scholar
Expression of Xenopus XlSALL4 during limb development and regeneration
A. Neff, M. King, M. Harty, Trent Nguyen +3 more
2005Developmental Dynamics42 citations Open access
Semantic Scholar
Genomic structure and expression of the human serotonin 2A receptor gene (HTR2A) locus: identification of novel HTR2A and antisense (HTR2A-AS1) exons
Cara L. A. Ruble, Ryan M. Smith, J. Calley, L. Munsie +7 more
2016BMC Genetics38 citations Open access
Semantic Scholar
Underlying mechanisms of pharmacology and toxicity of a novel PPAR agonist revealed using rodent and canine hepatocytes.
Yin Guo, R. Jolly, Bartley W. Halstead, T. K. Baker +11 more
2007Toxicological Sciences38 citations
Semantic Scholar
The Acyl CoenzymeA:Monoacylglycerol Acyltransferase 3 (MGAT3) Gene is a Pseudogene in Mice but Encodes a Functional Enzyme in Rats
Y. Yue, Yan-Qun Chen, Youyan Zhang, He Wang +8 more
2011Lipids33 citations
Semantic Scholar
Molecular dissection of CRC primary tumors and their matched liver metastases reveals critical role of immune microenvironment, EMT and angiogenesis in cancer metastasis
Jiangang Liu, Y. Cho, H. Hong, Song Wu +13 more
2020Scientific Reports28 citations Open access
Semantic Scholar
RATEmiRs: the rat atlas of tissue-specific and enriched miRNAs database
P. Bushel, F. Caiment, Han Wu, R. O’Lone +4 more
2018BMC Genomics20 citations Open access
Semantic Scholar
Paenibacillus lentus sp. nov., a β-mannanolytic bacterium isolated from mixed soil samples in a selective enrichment using guar gum as the sole carbon source.
Yong-Fu Li, J. Calley, P. Ebert, E. Helmes
2014International Journal of Systematic and Evolutionary Microbiology20 citations Open access
Semantic Scholar
Genome-wide Screen for Modulation of Hepatic Apolipoprotein A-I (ApoA-I) Secretion
R. Miles, William L. Perry, Joseph V. Haas, M. Mosior +12 more
2013Journal of Biological Chemistry13 citations Open access
Semantic Scholar
Elucidating the Impact of CHO Cell Culture Media on Tryptophan Oxidation of a Monoclonal Antibody Through Gene Expression Analyses.
Luhong He, J. Desai, Jin-xin Gao, Laurie B. Hazeltine +3 more
2018Biotechnology Journal10 citations
Semantic Scholar
High-Throughput and Quantitative Detection of Residual NS 0 and CHO Host Cell Genomic DNA
D. Venable, Guillermo Miró-Quesada, J. Calley, E. Monson
20078 citations
Semantic Scholar
Genetics construction kit: A tool for open-ended investigation in transmission genetics
P. Soderberg, J. Stewart, J. Calley, J. Jungck
1994Journal of Computing in Higher Education6 citations
Semantic Scholar
RATEmiRs: the rat atlas of tissue-specific and enriched miRNAs for discerning baseline expression exclusivity of candidate biomarkers
P. Bushel, F. Caiment, Han Wu, R. O’Lone +5 more
2020RNA Biology5 citations Open access
Semantic Scholar
The Da Vinci Code Illustrated Screenplay: Behind the Scenes of the Major Motion Picture
A. Goldsman, D. S. Brown, Ron Howard, Brian Grazer +1 more
20065 citations
Semantic Scholar
Large eQTL meta-analysis reveals differing patterns between cerebral cortical and cerebellar brain regions
S. Sieberts, T. Perumal, M. Carrasquillo, M. Allen +15 more
2019bioRxiv4 citations Open access
Semantic Scholar
A Flexible Integration and Visualisation System for Biomarker Discovery
M. Gaylord, J. Calley, Hua-Hong Qiang, Eric W. Su +1 more
2006Applied Bioinformatics4 citations
Semantic Scholar
Abstract 2647: Merestinib (LY2801653), targeting several oncokinases including NTRK1/2/3, shows potent anti-tumor effect in colorectal cell line- and patient-derived xenograft (PDX) model bearing TPM3-NTRK1 fusion
B. Konicek, Steven M Bray, A. Capen, J. Calley +12 more
20162 citations
Semantic Scholar
Microarray probe mapping and annotation in cross-species comparative toxicogenomics.
J. Calley, W. Mattes, T. Ryan
2008Methods in molecular biology2 citations
Semantic Scholar
Abstract 2586: PI3K/AKT signaling pathway is transcriptionally elevated in prexasertib-resistant TNBC PDX models
Yan Ding, Jiangang Liu, J. Calley, Hui-Rong Qian +9 more
2018Clinical research1 citations
Semantic Scholar
Molecular dissection of CRC primary tumors and their matched liver metastases reveals critical role of immune microenvironment, EMT and angiogenesis in cancer metastasis
Jiangang Liu, Y. Cho, H. Hong, Song Wu +13 more
2020Scientific Reports0 citations Open access
Semantic Scholar
Controlling tryptophan oxidation through medium/feed modifications and potential MOA unveiled by transcriptomics analysis
Luhong He, Laurie B. Hazeltine, Jin-xin Gao, J. Calley +2 more
20180 citations
Semantic Scholar
Abstract 849: Molecular characterization of primary tumor & the paired liver metastatic biopsies of colorectal cancer reveals a critical role of immunosuppression, EMT & angiogenesis in cancer metastasis
Jiangang Liu, Y. Cho, H. Hong, Song Wu +14 more
20170 citations
Semantic Scholar
Abstract 4104: Intrinsic and acquired resistance to cetuximab in colorectal cancer patients
Steven M Bray, Jeeyun Lee, S. Kim, P. Ebert +12 more
20170 citations
Semantic Scholar
Abstract 1446: Super-enhancer identification via Bru/BrUV-Seq and H3K27Ac ChIP-Seq
Chun-Lao Tang, V. Yadav, Hui-Rong Qian, Jason B. Cunningham +9 more
20170 citations
Semantic Scholar
Abstract 29: Concordance of somatic mutations found in primary tumors and plasma circulating-free DNA from early and late-stage colorectal cancer patients
Steven M Bray, P. Ebert, J. Calley, R. Higgs +5 more
20160 citations
Semantic Scholar
Abstract LB-048: Copy number and loss of heterozygosity (LOH) analysis in 52 breast cancer FFPE samples using molecular Inversion probe array: detailed analysis of reproducibility and performance compared to NGS platforms
Candice L. Horn, F. Nunes, J. Calley, Steven M Bray +7 more
20150 citations
Semantic Scholar
The rat microRNA body atlas: Towards understanding serum microRNA changes and their utilisation as biomarkers of specific organ toxicity
Aaron T. Smith, J. Calley, Sachin Mathur, Hui-Rong Qian +7 more
20140 citations
Semantic Scholar
Developing Long-term Inference Through Experimental Inquiry
J. Jungck, J. Calley
20140 citations
Semantic Scholar
Abstract 5108: A combined processing and assessment workflow for SNV and indel calling on exome sequencing of tumor samples
S. Wong, J. Calley, Jian Wang, Jason C. Ting +6 more
20120 citations
Semantic Scholar
Differential Effects of Estrogen and Raloxifene on mRNA and MMP2 Activity in the Rat Uterus
L. M. Helvering, T. Wei, S. Huang, P. Chen +2 more
20040 citations
Semantic Scholar
Spire is a maternal effect locus
Andrea J. Wellington, S. Emmons, B. James, J. Calley +3 more
19990 citations
Semantic Scholar
The Drosophila maternal-effect mutantcappuccino and its interactors
J. Calley
19980 citations
Semantic Scholar
日の名残(なご)り
James J. Ivory, M. Nichols, J. Calley, I. Merchant +1 more
19950 citations
Semantic Scholar

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