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Nobuaki Kono · SciRah

Researcher profile · Semantic Scholar

Nobuaki Kono

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Nobuaki Kono — researcher profile on SciRah

h-index: 19
Works: 73
Citations: 1,683

Most-cited papers

Nanopore sequencing: Review of potential applications in functional genomics
Nobuaki Kono, K. Arakawa
2019Development, Growth and Differentiation239 citations
Semantic Scholar
Spider silk self-assembly via modular liquid-liquid phase separation and nanofibrillation
A. Malay, Takehiro Suzuki, T. Katashima, Nobuaki Kono +2 more
2020Science Advances176 citations Open access
Semantic Scholar
Rif1 binds to G quadruplexes and suppresses replication over long distances
Yutaka Kanoh, S. Matsumoto, Rino Fukatsu, Naoko Kakusho +7 more
2015Nature Structural &Molecular Biology135 citations
Semantic Scholar
1000 spider silkomes: Linking sequences to silk physical properties
K. Arakawa, Nobuaki Kono, A. Malay, Ayaka Tateishi +34 more
2022Science Advances128 citations Open access
Semantic Scholar
KEGG-Based Pathway Visualization Tool for Complex Omics Data
K. Arakawa, Nobuaki Kono, Yohei Yamada, H. Mori +1 more
2005Silico Biol.121 citations
Semantic Scholar
Multicomponent nature underlies the extraordinary mechanical properties of spider dragline silk
Nobuaki Kono, Hiroyuki Nakamura, Masaru Mori, Yuki Yoshida +6 more
2021Proceedings of the National Academy of Sciences of the United States of America97 citations Open access
Semantic Scholar
Pathway Projector: Web-Based Zoomable Pathway Browser Using KEGG Atlas and Google Maps API
Nobuaki Kono, K. Arakawa, Ryu Ogawa, Nobuhiro Kido +4 more
2009PLoS ONE96 citations Open access
Semantic Scholar
Orb-weaving spider Araneus ventricosus genome elucidates the spidroin gene catalogue
Nobuaki Kono, Hiroyuki Nakamura, Rintaro Ohtoshi, Daniel A. Pedrazzoli Moran +6 more
2019Scientific Reports94 citations Open access
Semantic Scholar
Comprehensive prediction of chromosome dimer resolution sites in bacterial genomes
Nobuaki Kono, K. Arakawa, M. Tomita
2011BMC Genomics73 citations Open access
Semantic Scholar
Genome Projector: zoomable genome map with multiple views
K. Arakawa, S. Tamaki, Nobuaki Kono, Nobuhiro Kido +3 more
2009BMC Bioinformatics48 citations Open access
Semantic Scholar
Evaluation of the impact of RNA preservation methods of spiders for de novo transcriptome assembly
Nobuaki Kono, Hiroyuki Nakamura, Y. Ito, M. Tomita +1 more
2016Molecular Ecology Resources44 citations
Semantic Scholar
The bagworm genome reveals a unique fibroin gene that provides high tensile strength
Nobuaki Kono, Hiroyuki Nakamura, Rintaro Ohtoshi, M. Tomita +2 more
2019Communications Biology40 citations Open access
Semantic Scholar
Quantitative assay for TALEN activity at endogenous genomic loci
Yu Hisano, S. Ota, K. Arakawa, M. Muraki +7 more
2013Biology Open39 citations Open access
Semantic Scholar
Darwin's bark spider shares a spidroin repertoire with Caerostris extrusa but achieves extraordinary silk toughness through gene expression
Nobuaki Kono, Rintaro Ohtoshi, A. Malay, Masaru Mori +5 more
2021Open Biology33 citations Open access
Semantic Scholar
Metabolic flux analysis and visualization.
Yoshihiro Toya, Nobuaki Kono, K. Arakawa, M. Tomita
2011Journal of Proteome Research30 citations
Semantic Scholar
Spidroin profiling of cribellate spiders provides insight into the evolution of spider prey capture strategies
Nobuaki Kono, Hiroyuki Nakamura, Masaru Mori, M. Tomita +1 more
2020Scientific Reports25 citations Open access
Semantic Scholar
Accelerated Laboratory Evolution Reveals the Influence of Replication on the GC Skew in Escherichia coli
Nobuaki Kono, M. Tomita, K. Arakawa
2018Genome Biology and Evolution22 citations Open access
Semantic Scholar
Far rapid synthesis of giant DNA in the Bacillus subtilis genome by a conjugation transfer system
M. Itaya, Mitsuru Sato, Miki Hasegawa, Nobuaki Kono +2 more
2018Scientific Reports21 citations Open access
Semantic Scholar
The balance of crystalline and amorphous regions in the fibroin structure underpins the tensile strength of bagworm silk
Nobuaki Kono, Hiroyuki Nakamura, Ayaka Tateishi, K. Numata +1 more
2021Zoological Letters20 citations Open access
Semantic Scholar
MEGU: Pathway Mapping Web-Service Based on KEGG and SVG
Nobuaki Kono, K. Arakawa, M. Tomita
2006Silico Biol.18 citations
Semantic Scholar
Validation of Bacterial Replication Termination Models Using Simulation of Genomic Mutations
Nobuaki Kono, K. Arakawa, M. Tomita
2012PLoS ONE17 citations Open access
Semantic Scholar
The crucial role of single-stranded DNA binding in enhancing sensitivity to DNA-damaging agents for Schlafen 11 and Schlafen 13
Kohei Fujiwara, M. Maekawa, Yuki Iimori, Akane Ogawa +6 more
2023iScience15 citations Open access
Semantic Scholar
Shifts in morphology, gene expression, and selection underlie web loss in Hawaiian Tetragnatha spiders
Cory A. Berger, M. Brewer, Nobuaki Kono, Hiroyuki Nakamura +5 more
2021BMC Ecology and Evolution14 citations Open access
Semantic Scholar
Darwin’s bark spider shares a spidroin repertoire with Caerostris extrusa but achieves extraordinary silk toughness through gene expression
Nobuaki Kono, Rintaro Ohtoshi, A. Malay, Masaru Mori +5 more
2021bioRxiv14 citations Open access
Semantic Scholar
Xanthurenic Acid Is the Main Pigment of Trichonephila clavata Gold Dragline Silk
Masayuki Fujiwara, Nobuaki Kono, A. Hirayama, A. Malay +5 more
2021Biomolecules14 citations Open access
Semantic Scholar
Undesigned selection for replication termination of bacterial chromosomes.
Nobuaki Kono, K. Arakawa, Mitsuru Sato, H. Yoshikawa +2 more
2014Journal of Molecular Biology14 citations Open access
Semantic Scholar
Proteomic evidence for the silk fibroin genes of spider mites (order Trombidiformes: Family Tetranychidae).
K. Arakawa, Masaru Mori, Nobuaki Kono, Takeshi Suzuki +2 more
2021Journal of Proteomics12 citations Open access
Semantic Scholar
The complete mitochondrial genome of Eumeta variegata (Lepidoptera: Psychidae)
K. Arakawa, Nobuaki Kono, Rintaro Ohtoshi, Hiroyuki Nakamura +1 more
2018Mitochondrial DNA Part B: Resources11 citations Open access
Semantic Scholar
Restauro-G: A Rapid Genome Re-Annotation System for Comparative Genomics
S. Tamaki, K. Arakawa, Nobuaki Kono, M. Tomita
2007Genomics, Proteomics & Bioinformatics11 citations Open access
Semantic Scholar
Anti-tumor effects and potential therapeutic response biomarkers in α-emitting meta-211At-astato-benzylguanidine therapy for malignant pheochromocytoma explored by RNA-sequencing
Yasuhiro Ohshima, Nobuaki Kono, Y. Yokota, Shigeki Watanabe +4 more
2019Theranostics10 citations Open access
Semantic Scholar
Composition of minor ampullate silk makes its properties different from those of major ampullate silk
Hiroyuki Nakamura, Nobuaki Kono, Masaru Mori, H. Masunaga +2 more
2022bioRxiv8 citations Open access
Semantic Scholar
Allorecognition behaviors in Myxomycetes respond to intraspecies factors
Mana Masui, Phillip K. Yamamoto, Nobuaki Kono
2024Biology Open6 citations Open access
Semantic Scholar
Transcriptomic data during development of a two-spotted cricket Gryllus bimaculatus
Nobuaki Kono, Hiroyuki Nakamura, Rintaro Ohtoshi, K. Arakawa
2021Data in Brief6 citations Open access
Semantic Scholar
The evidence of temporary social parasitism by Polyrhachis lamellidens (Hymenoptera, Formicidae) in a Camponotus obscuripes colony (Hymenoptera, Formicidae)
Hironori Iwai, Yu Kurihara, Nobuaki Kono, M. Tomita +1 more
2021Insectes Sociaux5 citations Open access
Semantic Scholar
SLFN11-mediated tRNA regulation induces cell death by disrupting proteostasis in response to DNA-damaging agents
Yuki Iimori, Teppei Morita, Takeshi Masuda, Shojiro Kitajima +5 more
2025Nucleic Acids Research4 citations Open access
Semantic Scholar
Initial parasitic behaviour of the temporary social parasitic ant Polyrhachis lamellidens can be induced by host-like cuticles in laboratory environment
Yutaka Kurihara, Hironori Iwai, Nobuaki Kono, Masaru Tomita +1 more
2022Biology Open4 citations Open access
Semantic Scholar
The complete mitochondrial genome of Trichonephila clavipes (Araneae: Araneidae)
Nobuaki Kono, Hiroyuki Nakamura, K. Arakawa
2021Mitochondrial DNA Part B: Resources4 citations Open access
Semantic Scholar
eRP arrangement: a strategy for assembled genomic contig rearrangement based on replication profiling in bacteria
Nobuaki Kono, M. Tomita, K. Arakawa
2017BMC Genomics4 citations Open access
Semantic Scholar
Molecular evidence of chemical disguise by the socially parasitic spiny ant Polyrhachis lamellidens (Hymenoptera: Formicidae) when invading a host colony
Hironori Iwai, Masaru Mori, M. Tomita, Nobuaki Kono +1 more
2022bioRxiv3 citations Open access
Semantic Scholar
Complete Genome Sequence of Arthrobacter sp. Strain MN05-02, a UV-Resistant Bacterium from a Manganese Deposit in the Sonoran Desert
Konosuke M Ii, Nobuaki Kono, I. Paulino-Lima, M. Tomita +2 more
2019Journal of Genomics3 citations Open access
Semantic Scholar
SLFN11-mediated tRNA regulation induces cell death by disrupting proteostasis in response to DNA-damaging agents
Yuki Iimori, Teppei Morita, Takeshi Masuda, Shojiro Kitajima +5 more
2025bioRxiv2 citations Open access
Semantic Scholar
Loss of the starvation-and-light fruitbody formation trigger in the myxomycete Physarum roseum
Mana Masui, Phillip K. Yamamoto, Nobuaki Kono
2025Biology Letters2 citations Open access
Semantic Scholar
Increased CSN5 expression enhances the sensitivity to lenalidomide in multiple myeloma cells
Takumi Yamamoto, Arisu Furukawa, Yue Zhou, Nobuaki Kono +7 more
2024iScience1 citations Open access
Semantic Scholar
Cuticular Hydrocarbon Profiling by Fractionation and GC-MS in Socially Parasitic Ants
Hironori Iwai, Nobuaki Kono
2023Bio-protocol1 citations Open access
Semantic Scholar
Strand-specific Single-stranded DNA Sequencing (4S-seq) of E. coli genomes.
Takahiro Masuda, Nobuaki Kono, M. Tomita, K. Arakawa
2019Bio-protocol1 citations Open access
Semantic Scholar
Passage through the sclerotial stage does not impose persistent transcriptional reprogramming in Physarum
Kentaro Tsuchida, Mana Masui, Nobuaki Kono
2026Mycologia0 citations Open access
Semantic Scholar
Species selection criteria for sustainable bacterial single cell protein
Ruka Takegawa, Nobuaki Kono
2026npj Science of Food0 citations Open access
Semantic Scholar
Bacillus subtilis var. natto as a naturally optimized biotin biosensor.
Wakana Suda, Y. Ohashi, Nobuaki Kono
2026Journal of General and Applied Microbiology0 citations Open access
Semantic Scholar
Biotin Dependency Shapes Sporulation Kinetics in Bacillus subtilis var. natto.
Wakana Suda, Shojiro Kitajima, K. Asai, Y. Ohashi +1 more
2026Journal of General and Applied Microbiology0 citations Open access
Semantic Scholar
Non-invasive molecular species identification using spider silk proteomics
Phillip K. Yamamoto, Keizo Takasuka, Masaru Mori, Takeshi Masuda +1 more
2025Scientific Reports0 citations Open access
Semantic Scholar

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Rintaro Ohtoshi

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