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A. Souvorov · SciRah

Researcher profile · Semantic Scholar

A. Souvorov

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A. Souvorov — researcher profile on SciRah

h-index: 8
Works: 23
Citations: 2,666

Most-cited papers

The Ecoresponsive Genome of Daphnia pulex
J. Colbourne, M. Pfrender, D. Gilbert, W. Thomas +65 more
2011Science1,250 citations Open access
Semantic Scholar
Splign: algorithms for computing spliced alignments with identification of paralogs
Y. Kapustin, A. Souvorov, T. Tatusova, D. Lipman
2008Biology Direct362 citations Open access
Semantic Scholar
NCBI RefSeq: reference sequence standards through 25 years of curation and annotation.
T. Goldfarb, V. Kodali, S. Pujar, V. Brover +32 more
2024Nucleic Acids Research342 citations Open access
Semantic Scholar
Eukaryotic Genome Annotation Pipeline
F. Thibaud-Nissen, A. Souvorov, Terence D. Murphy, M. DiCuccio +1 more
2013240 citations
Semantic Scholar
The relationship of protein conservation and sequence length
D. Lipman, A. Souvorov, E. Koonin, A. Panchenko +1 more
2002BMC Evolutionary Biology166 citations Open access
Semantic Scholar
Estimates of Positive Darwinian Selection Are Inflated by Errors in Sequencing, Annotation, and Alignment
Adrian Schneider, A. Souvorov, N. Sabath, Giddy Landan +2 more
2009Genome Biology and Evolution130 citations Open access
Semantic Scholar
Genomic BLAST: custom-defined virtual databases for complete and unfinished genomes.
L. M. Cummings, Leigh Riley, Lori Black, A. Souvorov +3 more
2002FEMS Microbiology Letters103 citations Open access
Semantic Scholar
Genome Assembly Has a Major Impact on Gene Content: A Comparison of Annotation in Two Bos Taurus Assemblies
Liliana D. Florea, A. Souvorov, T. Kalbfleisch, S. Salzberg
2011PLoS ONE77 citations Open access
Semantic Scholar
Genes and genomes, an imperfect world: comparison of gene annotations of two Bos taurus draft assemblies
Liliana D. Florea, A. Souvorov, S. Salzberg
2010Genome Biology3 citations Open access
Semantic Scholar
Future development : annotation reports
F. Thibaud-Nissen, A. Souvorov, Terence D. Murphy, M. DiCuccio +1 more
20170 citations
Semantic Scholar
Hybrid Method of Using RNA-Seq for Genome Annotation
A. Souvorov
20160 citations
Semantic Scholar
Improving Gene Annotation using RNA-Seq and Transcriptome Shotgun Assembly
A. Souvorov
20140 citations
Semantic Scholar
Table 1. [Guide to the features annotated...].
F. Thibaud-Nissen, A. Souvorov, Terence D. Murphy, M. DiCuccio +1 more
20130 citations
Semantic Scholar
Figure 7. [Example of a known RefSeq...].
F. Thibaud-Nissen, A. Souvorov, Terence D. Murphy, M. DiCuccio +1 more
20130 citations
Semantic Scholar
Figure 4. [Overview of the process flow...].
F. Thibaud-Nissen, A. Souvorov, Terence D. Murphy, M. DiCuccio +1 more
20130 citations
Semantic Scholar
Figure 1. [Splign reduces the computational complexity...].
F. Thibaud-Nissen, A. Souvorov, Terence D. Murphy, M. DiCuccio +1 more
20130 citations
Semantic Scholar
Figure 9. [Public report of annotion runs...].
F. Thibaud-Nissen, A. Souvorov, Terence D. Murphy, M. DiCuccio +1 more
20130 citations
Semantic Scholar
Figure 8. [Ranking of alignments across multiple...].
F. Thibaud-Nissen, A. Souvorov, Terence D. Murphy, M. DiCuccio +1 more
20130 citations
Semantic Scholar
Figure 5. [Typical RefSeq record for a...].
F. Thibaud-Nissen, A. Souvorov, Terence D. Murphy, M. DiCuccio +1 more
20130 citations
Semantic Scholar
Table 2. [Availability of annotation products in NCBI resources.].
F. Thibaud-Nissen, A. Souvorov, Terence D. Murphy, M. DiCuccio +1 more
20130 citations
Semantic Scholar
Figure 6. [Example of a RefSeq record...].
F. Thibaud-Nissen, A. Souvorov, Terence D. Murphy, M. DiCuccio +1 more
20130 citations
Semantic Scholar
Figure 2. [Combining the alignments with the...].
F. Thibaud-Nissen, A. Souvorov, Terence D. Murphy, M. DiCuccio +1 more
20130 citations
Semantic Scholar
Figure 3. [Partial chains a and b...].
F. Thibaud-Nissen, A. Souvorov, Terence D. Murphy, M. DiCuccio +1 more
20130 citations
Semantic Scholar

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