René Snajder

Most-cited papers

1. A survey of tools for variant analysis of next-generation genome sequencing data

   Stephan Pabinger, Andreas Dander, Maria Fischer, René Snajder +6 more

   2013Briefings Bioinform.592 citations Open access

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2. Characterization of the immunophenotypes and antigenomes of colorectal cancers reveals distinct tumor escape mechanisms and novel targets for immunotherapy

   M. Angelova, P. Charoentong, H. Hackl, Maria Fischer +7 more

   2015Genome Biology492 citations Open access

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3. QPCR: Application for real-time PCR data management and analysis

   Stephan Pabinger, G. Thallinger, René Snajder, H. Eichhorn +2 more

   2009BMC Bioinformatics65 citations Open access

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4. SIMPLEX: Cloud-Enabled Pipeline for the Comprehensive Analysis of Exome Sequencing Data

   Maria Fischer, René Snajder, Stephan Pabinger, Andreas Dander +4 more

   2012PLoS ONE52 citations Open access

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5. Long-read sequencing of diagnosis and post-therapy medulloblastoma reveals complex rearrangement patterns and epigenetic signatures

   T. Rausch, René Snajder, Adrien Léger, M. Simovic +9 more

   2022bioRxiv44 citations Open access

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6. MEMOSys 2.0: an update of the bioinformatics database for genome-scale models and genomic data

   Stephan Pabinger, René Snajder, Timo Hardiman, Michaela Willi +2 more

   2014Database J. Biol. Databases Curation23 citations Open access

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7. pycoMeth: a toolbox for differential methylation testing from Nanopore methylation calls

   René Snajder, Adrien Léger, O. Stegle, M. Bonder

   2022bioRxiv16 citations Open access

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8. Functional Categories Associated with Clusters of Genes That Are Co-Expressed across the NCI-60 Cancer Cell Lines

   B. Zeeberg, W. Reinhold, René Snajder, G. Thallinger +3 more

   2012PLoS ONE14 citations Open access

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9. GPViz: dynamic visualization of genomic regions and variants affecting protein domains

   René Snajder, Z. Trajanoski, H. Hackl

   2013Bioinform.3 citations Open access

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10. High-Throughput Characterization and Comparison of Microbial Communities

    B. Halwachs, Johann Höftberger, Gernot Stocker, René Snajder +2 more

    2013Biomedizinische Technik. Biomedical engineering2 citations Open access

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11. A robust ex vivo system to study cellular dynamics underlying mouse peri-implantation development

    T. Ichikawa, Hui-Ting Zhang, Laura Panavaite, A. Erzberger +8 more

    2021bioRxiv1 citations Open access

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12. Decontaminator: detection and removal of contaminating sequences of unknown source

    B. Halwachs, René Snajder, G. Gorkiewicz, G. Thallinger

    20150 citations

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13. SnoWMAn: a Straightforward NOvel Webinterface for Microbiome ANalysis

    B. Halwachs, René Snajder, Johann Höftberger, Gernot Stocker +2 more

    20140 citations

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14. SnoWMAn: high throughput phylotyping

    Gernot Stocker, René Snajder, B. Halwachs, S. Trajanoski +2 more

    20110 citations

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