Jing-Yin Yu

Most-cited papers

1. The genome of the mesopolyploid crop species Brassica rapa

   Xiaowu Wang, Han-zhong Wang, Jun Wang, R. Sun +105 more

   2011Nature Genetics1,978 citations Open access

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2. The Brassica oleracea genome reveals the asymmetrical evolution of polyploid genomes

   Sheng Liu, Yu-Mei Liu, Xin-Hua Yang, C. Tong +82 more

   2014Nature Communications1,034 citations Open access

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3. PMRD: plant microRNA database

   Zhen-Hai Zhang, Jing-Yin Yu, Dao-Feng Li, Zunmin Zhang +5 more

   2009Nucleic Acids Res.368 citations Open access

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4. Genome sequencing of the high oil crop sesame provides insight into oil biosynthesis

   Lin-Hai Wang, Sheng-Li Yu, C. Tong, Ying-Zhong Zhao +21 more

   2014Genome Biology306 citations Open access

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5. The high‐quality genome of Brassica napus cultivar ‘ZS11’ reveals the introgression history in semi‐winter morphotype

   Fengming Sun, G. Fan, Qiong Hu, Yong-Ming Zhou +36 more

   2017The Plant Journal230 citations

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6. Transcriptomic and metabolomic profiling of drought-tolerant and susceptible sesame genotypes in response to drought stress

   Jun You, Yu-Juan Zhang, Aili Liu, Dong-Hua Li +7 more

   2019BMC Plant Biology203 citations Open access

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7. Comprehensive analysis of RNA-seq data reveals the complexity of the transcriptome in Brassica rapa

   C. Tong, Xiaowu Wang, Jing-Yin Yu, Jian Wu +5 more

   2013BMC Genomics176 citations Open access

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8. The Emerging Oilseed Crop Sesamum indicum Enters the “Omics” Era

   K. Dossa, D. Diouf, Lin-Hai Wang, Xin Wei +9 more

   2017Frontiers in Plant Science151 citations Open access

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9. Insight into the AP2/ERF transcription factor superfamily in sesame and expression profiling of DREB subfamily under drought stress

   K. Dossa, Xin Wei, Dong-Hua Li, D. Fonceka +7 more

   2016BMC Plant Biology147 citations Open access

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10. Genome-wide comparative analysis of NBS-encoding genes between Brassica species and Arabidopsis thaliana

    Jing-Yin Yu, Sadia Tehrim, Feng-Qi Zhang, C. Tong +7 more

    2014BMC Genomics147 citations Open access

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11. Transcriptome and metabolome analyses of two contrasting sesame genotypes reveal the crucial biological pathways involved in rapid adaptive response to salt stress

    Yu-Juan Zhang, Dong-Hua Li, Rong Zhou, Xiao Wang +7 more

    2019BMC Plant Biology138 citations Open access

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12. Genome-wide analysis of WRKY gene family in the sesame genome and identification of the WRKY genes involved in responses to abiotic stresses

    Dong-Hua Li, Pan Liu, Jing-Yin Yu, Lin-Hai Wang +5 more

    2017BMC Plant Biology125 citations Open access

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13. Updated sesame genome assembly and fine mapping of plant height and seed coat color QTLs using a new high-density genetic map

    Lin-Hai Wang, Qiuju Xia, Yan-Xin Zhang, Xiao-Dong Zhu +9 more

    2016BMC Genomics124 citations Open access

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14. CuGenDBv2: an updated database for cucurbit genomics

    Jing-Yin Yu, Shan Wu, Honghe Sun, Xin Wang +16 more

    2022Nucleic Acids Res.119 citations Open access

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15. Bolbase: a comprehensive genomics database for Brassica oleracea

    Jing-Yin Yu, Meixia Zhao, Xiaowu Wang, C. Tong +5 more

    2013BMC Genomics108 citations Open access

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16. Insight into the evolution and functional characteristics of the pan‐genome assembly from sesame landraces and modern cultivars

    Jing-Yin Yu, Agnieszka A. Golicz, K. Lu, K. Dossa +7 more

    2018Plant Biotechnology Journal90 citations Open access

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17. The genetic basis of drought tolerance in the high oil crop Sesamum indicum

    K. Dossa, Dong-Hua Li, Rong Zhou, Jing-Yin Yu +10 more

    2019Plant Biotechnology Journal88 citations Open access

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18. Identification and characterization of the bZIP transcription factor family and its expression in response to abiotic stresses in sesame

    Yan-Yan Wang, Yu-Juan Zhang, Rong Zhou, K. Dossa +6 more

    2018PLoS ONE86 citations Open access

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19. Transcriptomic, biochemical and physio-anatomical investigations shed more light on responses to drought stress in two contrasting sesame genotypes

    K. Dossa, Dong-Hua Li, Lin-Hai Wang, Xiao-Min Zheng +9 more

    2017Scientific Reports85 citations Open access

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20. Genome-Wide Microsatellite Characterization and Marker Development in the Sequenced Brassica Crop Species

    Jia-Qin Shi, Shunmou Huang, Jie-Peng Zhan, Jing-Yin Yu +5 more

    2013DNA Research82 citations Open access

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21. Transcriptome profile analysis of young floral buds of fertile and sterile plants from the self-pollinated offspring of the hybrid between novel restorer line NR1 and Nsa CMS line in Brassica napus

    Xiao-Hong Yan, Caihua Dong, Jing-Yin Yu, Wanghui Liu +5 more

    2013BMC Genomics82 citations Open access

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22. Genome-wide identification and analysis of the MADS-box gene family in sesame.

    Xin Wei, Lin-Hai Wang, Jing-Yin Yu, Yan-Xin Zhang +2 more

    2015Gene75 citations

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23. Genome-wide analysis of UDP-glycosyltransferase super family in Brassica rapa and Brassica oleracea reveals its evolutionary history and functional characterization

    Jing-Yin Yu, Fan Hu, K. Dossa, Zhao-Kai Wang +1 more

    2017BMC Genomics69 citations Open access

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24. Tolerant and Susceptible Sesame Genotypes Reveal Waterlogging Stress Response Patterns

    Lin-Hai Wang, Dong-Hua Li, Yan-Xin Zhang, Yuan Gao +3 more

    2016PLoS ONE67 citations Open access

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25. Sinbase: an integrated database to study genomics, genetics and comparative genomics in Sesamum indicum.

    Lin-Hai Wang, Jing-Yin Yu, Dong-Hua Li, Xiu-Rong Zhang

    2015Plant and Cell Physiology67 citations

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26. PTGBase: an integrated database to study tandem duplicated genes in plants

    Jing-Yin Yu, Tao Ke, Sadia Tehrim, Fengming Sun +2 more

    2015Database J. Biol. Databases Curation63 citations Open access

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27. PMDBase: a database for studying microsatellite DNA and marker development in plants

    Jing-Yin Yu, K. Dossa, Lin-Hai Wang, Yan-Xin Zhang +3 more

    2016Nucleic Acids Res.60 citations Open access

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28. Identification of Sesame Genomic Variations from Genome Comparison of Landrace and Variety

    Xin Wei, Xiao-Dong Zhu, Jing-Yin Yu, Lin-Hai Wang +4 more

    2016Frontiers in Plant Science60 citations Open access

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29. Genome-wide identification and comprehensive analysis of the NAC transcription factor family in Sesamum indicum

    Yu-Juan Zhang, Dong-Hua Li, Yan-Yan Wang, Rong Zhou +6 more

    2018PLoS ONE48 citations Open access

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30. Development of SSR markers and identification of major quantitative trait loci controlling shelling percentage in cultivated peanut (Arachis hypogaea L.)

    Huaiyong Luo, Zhijun Xu, Zhendong Li, Xinping Li +10 more

    2017Theoretical and Applied Genetics48 citations Open access

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31. Genome-Wide Association Studies of 39 Seed Yield-Related Traits in Sesame (Sesamum indicum L.)

    Rong Zhou, K. Dossa, Dong-Hua Li, Jing-Yin Yu +3 more

    2018International Journal of Molecular Sciences45 citations Open access

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32. Evolutionary history and functional divergence of the cytochrome P450 gene superfamily between Arabidopsis thaliana and Brassica species uncover effects of whole genome and tandem duplications

    Jing-Yin Yu, Sadia Tehrim, Lin-Hai Wang, K. Dossa +3 more

    2017BMC Genomics45 citations Open access

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33. High-resolution temporal transcriptome sequencing unravels ERF and WRKY as the master players in the regulatory networks underlying sesame responses to waterlogging and recovery.

    Lin-Hai Wang, K. Dossa, Jun You, Yan-Xin Zhang +9 more

    2020Genomics43 citations Open access

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34. SesameFG: an integrated database for the functional genomics of sesame

    Xin Wei, Hao Gong, Jing-Yin Yu, Pan Liu +3 more

    2017Scientific Reports42 citations Open access

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35. Transcriptome Dynamics during Black and White Sesame (Sesamum indicum L.) Seed Development and Identification of Candidate Genes Associated with Black Pigmentation

    Lin-Hai Wang, Senouwa Segla Koffi Dossou, Xin Wei, Yan-Xin Zhang +3 more

    2020Genes40 citations Open access

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36. Identification of a Novel Proline-Rich Antimicrobial Peptide from Brassica napus

    Hui-Hui Cao, Tao Ke, Ren-Hu Liu, Jing-Yin Yu +4 more

    2015PLoS ONE40 citations Open access

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37. Development of Highly Informative Genome-Wide Single Sequence Repeat Markers for Breeding Applications in Sesame and Construction of a Web Resource: SisatBase

    K. Dossa, Jing-Yin Yu, B. Liao, N. Cisse +1 more

    2017Frontiers in Plant Science38 citations Open access

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38. Shifts in the evolutionary rate and intensity of purifying selection between two Brassica genomes revealed by analyses of orthologous transposons and relics of a whole genome triplication.

    Meixia Zhao, Jian-Chang Du, F. Lin, C. Tong +5 more

    2013The Plant Journal36 citations Open access

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39. Transcriptomic profiling of sesame during waterlogging and recovery

    K. Dossa, Jun You, Lin-Hai Wang, Yan-Xin Zhang +9 more

    2019Scientific Data32 citations Open access

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40. Syntenic quantitative trait loci and genomic divergence for Sclerotinia resistance and flowering time in Brassica napus.

    Feng-Qi Zhang, Jun-Yan Huang, Min-Qiang Tang, Xiaohui Cheng +9 more

    2019Journal of Integrative Plant Biology30 citations

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41. Gene expression profiles that shape high and low oil content sesames

    Lin-Hai Wang, Yan-Xin Zhang, Dong-Hua Li, K. Dossa +4 more

    2019BMC Genetics29 citations Open access

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42. Dynamic transcriptome landscape of sesame (Sesamum indicum L.) under progressive drought and after rewatering

    K. Dossa, Dong-Hua Li, Lin-Hai Wang, Xiao-Min Zheng +7 more

    2017Genomics Data28 citations Open access

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43. Functional Identification and Characterization of the Brassica Napus Transcription Factor Gene BnAP2, the Ortholog of Arabidopsis Thaliana APETALA2

    Xiao-Hong Yan, Lei Zhang, Bo Chen, Z. Xiong +5 more

    2012PLoS ONE27 citations Open access

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44. Cysteine Protease 51 (CP51), an anther-specific cysteine protease gene, is essential for pollen exine formation in Arabidopsis

    Yong-Xue Yang, Caihua Dong, Jing-Yin Yu, Lei Shi +4 more

    2014Plant Cell Tissue and Organ Culture26 citations

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45. Genome-Wide Identification of Flowering-Time Genes in Brassica Species and Reveals a Correlation between Selective Pressure and Expression Patterns of Vernalization-Pathway Genes in Brassica napus

    Hao-Jie Li, Yong-Hai Fan, Jing-Yin Yu, Liang Chai +6 more

    2018International Journal of Molecular Sciences22 citations Open access

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46. Genetic dissection and fine mapping of a novel dt gene associated with determinate growth habit in sesame

    Yan-Xin Zhang, Lin-Hai Wang, Yuan Gao, Dong-Hua Li +3 more

    2018BMC Genetics21 citations Open access

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47. Genome evolutionary dynamics followed by diversifying selection explains the complexity of the Sesamum indicum genome

    Jing-Yin Yu, Lin-Hai Wang, Hui Guo, B. Liao +2 more

    2017BMC Genomics18 citations Open access

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48. ocsESTdb: a database of oil crop seed EST sequences for comparative analysis and investigation of a global metabolic network and oil accumulation metabolism

    Tao Ke, Jing-Yin Yu, Caihua Dong, Han Mao +2 more

    2015BMC Plant Biology17 citations Open access

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49. Transcriptomic comparison between Brassica oleracea and rice (Oryza sativa) reveals diverse modulations on cell death in response to Sclerotinia sclerotiorum

    J. Mei, Yi-Juan Ding, Yue-Hua Li, C. Tong +8 more

    2016Scientific Reports16 citations Open access

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50. EST-based in silico identification and in vitro test of antimicrobial peptides in Brassica napus

    Tao Ke, Hui-Hui Cao, Jun-Yan Huang, Fan Hu +9 more

    2015BMC Genomics15 citations Open access

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