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N. Upadhyaya · SciRah

Researcher profile · Semantic Scholar

N. Upadhyaya

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N. Upadhyaya — researcher profile on SciRah

h-index: 41
Works: 105
Citations: 4,707

Most-cited papers

Rice Mutant Resources for Gene Discovery
H. Hirochika, E. Guiderdoni, G. An, Y. Hsing +8 more
2004Plant Molecular Biology254 citations Open access
Semantic Scholar
Loss of AvrSr50 by somatic exchange in stem rust leads to virulence for Sr50 resistance in wheat
Jiapeng Chen, N. Upadhyaya, D. Ortiz, Jana Sperschneider +19 more
2017Science191 citations Open access
Semantic Scholar
Mutant Resources in Rice for Functional Genomics of the Grasses[W]
Arjun Krishnan, E. Guiderdoni, G. An, Y. Hsing +10 more
2009Plant Physiology189 citations Open access
Semantic Scholar
A five-transgene cassette confers broad-spectrum resistance to a fungal rust pathogen in wheat
Ming Luo, Li-Qiong Xie, Soma Chakraborty, Aihua Wang +20 more
2021Nature Biotechnology149 citations Open access
Semantic Scholar
Emergence of the Ug99 lineage of the wheat stem rust pathogen through somatic hybridisation
Feng Li, N. Upadhyaya, Jana Sperschneider, O. Matny +13 more
2019Nature Communications148 citations Open access
Semantic Scholar
Antisense suppression of the rice transporter gene, OsSUT1, leads to impaired grain filling and germination but does not affect photosynthesis.
G. Scofield, Tatsuro Hirose, J. Gaudron, R. Furbank +2 more
2002Functional Plant Biology146 citations Open access
Semantic Scholar
The ANTHER INDEHISCENCE1 Gene Encoding a Single MYB Domain Protein Is Involved in Anther Development in Rice1
Qian-Hao Zhu, K. Ramm, Ramani Shivakkumar, E. Dennis +1 more
2004Plant Physiology137 citations Open access
Semantic Scholar
The redistribution of protein sulfur in transgenic rice expressing a gene for a foreign, sulfur-rich protein.
N. Hagan, N. Upadhyaya, Linda Tabe, T. J. V. Higgins
2003The Plant Journal134 citations Open access
Semantic Scholar
Functional characterization of the rice kaurene synthase-like gene family.
Meimei Xu, P. R. Wilderman, Dana J Morrone, Jianjun Xu +5 more
2007Phytochemistry126 citations
Semantic Scholar
Improved vectors for Agrobacterium tumefaciens-mediated transformation of monocot plants
Ming-Bo Wang, Zhongy Li, P. Matthews, N. Upadhyaya +1 more
1998126 citations
Semantic Scholar
The genome sequence and effector complement of the flax rust pathogen Melampsora lini
A. Nemri, Diane G. O. Saunders, C. Anderson, N. Upadhyaya +6 more
2014Frontiers in Plant Science122 citations Open access
Semantic Scholar
Strategies for Wheat Stripe Rust Pathogenicity Identified by Transcriptome Sequencing
Diana P. Garnica, N. Upadhyaya, P. Dodds, J. Rathjen
2013PLoS ONE118 citations Open access
Semantic Scholar
Agrobacterium-mediated transformation of Australian rice cultivars Jarrah and Amaroo using modified promoters and selectable markers
N. Upadhyaya, B. Surin, K. Ramm, J. Gaudron +4 more
2000118 citations
Semantic Scholar
The wheat durable, multipathogen resistance gene Lr34 confers partial blast resistance in rice.
S. Krattinger, J. Sucher, L. Selter, H. Chauhan +9 more
2016Plant Biotechnology Journal110 citations Open access
Semantic Scholar
A bacterial type III secretion assay for delivery of fungal effector proteins into wheat.
N. Upadhyaya, R. Mago, B. Staskawicz, M. Ayliffe +2 more
2014Molecular Plant-Microbe Interactions107 citations Open access
Semantic Scholar
The Ins and Outs of Rust Haustoria
Diana P. Garnica, A. Nemri, N. Upadhyaya, J. Rathjen +1 more
2014PLoS Pathogens101 citations Open access
Semantic Scholar
Genomics accelerated isolation of a new stem rust avirulence gene–wheat resistance gene pair
N. Upadhyaya, R. Mago, Vinay Panwar, Tim C. Hewitt +15 more
2021Nature Plants93 citations Open access
Semantic Scholar
Reciprocal control of flowering time by OsSOC1 in transgenic Arabidopsis and by FLC in transgenic rice.
M. Tadege, C. C. Sheldon, C. Helliwell, N. Upadhyaya +2 more
2003Plant Biotechnology Journal91 citations Open access
Semantic Scholar
Over-expression of the rice OsAMT1-1 gene increases ammonium uptake and content, but impairs growth and development of plants under high ammonium nutrition.
M. Hoque, J. Masle, M. Udvardi, P. Ryan +1 more
2006Functional Plant Biology89 citations
Semantic Scholar
Intron-mediated improvement of a selectable marker gene for plant transformation using Agrobacterium tumefaciens
Ming-Bo Wang, N. Upadhyaya, R. Brettell, P. Waterhouse
199783 citations
Semantic Scholar
Generation of selectable marker-free transgenic rice using double right-border (DRB) binary vectors
Hui-Juan Lu, Xue-Rong Zhou, Z. Gong, N. Upadhyaya
200175 citations Open access
Semantic Scholar
Comparative genomics of Australian isolates of the wheat stem rust pathogen Puccinia graminis f. sp. tritici reveals extensive polymorphism in candidate effector genes
N. Upadhyaya, Diana P. Garnica, H. Karaoğlu, Jana Sperschneider +8 more
2015Frontiers in Plant Science73 citations Open access
Semantic Scholar
A recombined Sr26 and Sr61 disease resistance gene stack in wheat encodes unrelated NLR genes
Jianping Zhang, Tim C. Hewitt, W. Boshoff, I. Dundas +21 more
2021Nature Communications71 citations Open access
Semantic Scholar
Ds tagging of BRANCHED FLORETLESS 1 (BFL1) that mediates the transition from spikelet to floret meristem in rice (Oryza sativa L)
Qian-Hao Zhu, M. Hoque, Elizabeth S. Dennis, N. Upadhyaya
2003BMC Plant Biology70 citations Open access
Semantic Scholar
Wheat leaf rust resistance gene Lr13 is a specific Ne2 allele for hybrid necrosis.
Tim C. Hewitt, Jianping Zhang, Li Huang, N. Upadhyaya +6 more
2021Molecular Plant68 citations Open access
Semantic Scholar
An iAc/Ds gene and enhancer trapping system for insertional mutagenesis in rice.
N. Upadhyaya, Xue-Rong Zhou, Qian-Hao Zhu, K. Ramm +9 more
2002Functional Plant Biology67 citations Open access
Semantic Scholar
Agrobacterium tumefaciens-mediated transformation of wheat using suspension cells as a model system and green fluorescent protein as a visual marker
B. Weir, X. Gu, Ming-Bo Wang, N. Upadhyaya +2 more
200167 citations Open access
Semantic Scholar
Protein extraction from mature rice leaves for two‐dimensional gel electrophoresis and its application in proteome analysis
N. Islam, M. Lonsdale, N. Upadhyaya, T. Higgins +2 more
2004Proteomics64 citations
Semantic Scholar
SHOEBOX Modulates Root Meristem Size in Rice through Dose-Dependent Effects of Gibberellins on Cell Elongation and Proliferation
Jin-Tao Li, Yu Zhao, Huangwei Chu, Li-Kai Wang +8 more
2015PLoS Genetics63 citations Open access
Semantic Scholar
Isolation and characterization of a Ds-tagged rice (Oryza sativa L.) GA-responsive dwarf mutant defective in an early step of the gibberellin biosynthesis pathway
M. Margis-Pinheiro, Xue-Rong Zhou, Qian-Hao Zhu, E. Dennis +1 more
2005Plant Cell Reports63 citations
Semantic Scholar
Genome analysis and avirulence gene cloning using a high-density RADseq linkage map of the flax rust fungus, Melampsora lini
C. Anderson, Muhammad Adil Khan, Ann-Maree Catanzariti, Cameron Jack +7 more
2016BMC Genomics60 citations Open access
Semantic Scholar
Comparison of promoters and selectable marker genes for use in Indica rice transformation
Zhongy Li, N. Upadhyaya, Selva Meena, A. Gibbs +1 more
1997Molecular breeding60 citations
Semantic Scholar
De Novo Assembly and Phasing of Dikaryotic Genomes from Two Isolates of Puccinia coronata f. sp. avenae, the Causal Agent of Oat Crown Rust
Marisa E. Miller, Ying Zhang, V. Omidvar, Jana Sperschneider +12 more
2017mBio59 citations Open access
Semantic Scholar
Stem rust resistance in wheat is suppressed by a subunit of the mediator complex
C. Hiebert, M. Moscou, Tim C. Hewitt, B. Steuernagel +18 more
2020Nature Communications54 citations Open access
Semantic Scholar
Agrobacterium tumefaciens-mediated transformation of an elite Australian barley cultivar with virus resistance and reporter genes
Ming-Bo Wang, D. Abbott, N. Upadhyaya, J. Jacobsen +1 more
200151 citations Open access
Semantic Scholar
Changing the Game: Using Integrative Genomics to Probe Virulence Mechanisms of the Stem Rust Pathogen Puccinia graminis f. sp. tritici
M. Figueroa, N. Upadhyaya, Jana Sperschneider, R. Park +4 more
2016Frontiers in Plant Science48 citations Open access
Semantic Scholar
The stem rust effector protein AvrSr50 escapes Sr50 recognition by a substitution in a single surface‐exposed residue
D. Ortiz, Jian Chen, M. Outram, Isabel M. L. Saur +7 more
2022New Phytologist47 citations Open access
Semantic Scholar
Physical separation of haplotypes in dikaryons allows benchmarking of phasing accuracy in Nanopore and HiFi assemblies with Hi-C data
Hongyu Duan, Ashley W. Jones, Tim C. Hewitt, Amy Mackenzie +12 more
2022Genome Biology47 citations Open access
Semantic Scholar
Chemical- and Irradiation-Induced Mutants and TILLING
R. Bhat, N. Upadhyaya, A. Chaudhury, C. Raghavan +8 more
200747 citations
Semantic Scholar
Dissociation (Ds) constructs, mapped Ds launch pads and a transiently-expressed transposase system suitable for localized insertional mutagenesis in rice
N. Upadhyaya, Qian-Hao Zhu, Xue-Rong Zhou, A. Eamens +9 more
2006Theoretical and Applied Genetics47 citations
Semantic Scholar
Diversifying selection in the wheat stem rust fungus acts predominantly on pathogen-associated gene families and reveals candidate effectors
Jana Sperschneider, H. Ying, P. Dodds, D. Gardiner +4 more
2014Frontiers in Plant Science44 citations Open access
Semantic Scholar
Major haplotype divergence including multiple germin-like protein genes, at the wheat Sr2 adult plant stem rust resistance locus
R. Mago, L. Tabe, S. Vautrin, H. Šimková +9 more
2014BMC Plant Biology41 citations Open access
Semantic Scholar
The different effects of starch synthase IIa mutations or variation on endosperm amylose content of barley, wheat and rice are determined by the distribution of starch synthase I and starch branching enzyme IIb between the starch granule and amyloplast stroma
Ji-Xun Luo, Regina Ahmed, B. Kosar-Hashemi, O. Larroque +10 more
2015Theoretical and Applied Genetics40 citations Open access
Semantic Scholar
Rice functional genomics: challenges, progress and prospects.
N. Upadhyaya
200739 citations
Semantic Scholar
A bidirectional gene trap construct suitable for T-DNA and Ds-mediated insertional mutagenesis in rice (Oryza sativa L.).
A. Eamens, C. Blanchard, E. Dennis, N. Upadhyaya
2004Plant Biotechnology Journal38 citations
Semantic Scholar
Transgene structures suggest that multiple mechanisms are involved in T-DNA integration in plants.
Qian-Hao Zhu, K. Ramm, A. Eamens, E. Dennis +1 more
2006Plant Science36 citations
Semantic Scholar
Genomic Analysis of Xanthomonas translucens Pathogenic on Wheat and Barley Reveals Cross-Kingdom Gene Transfer Events and Diverse Protein Delivery Systems
D. Gardiner, N. Upadhyaya, J. Stiller, J. Ellis +3 more
2014PLoS ONE34 citations Open access
Semantic Scholar
Efficient TALEN‐mediated gene editing in wheat
Ming Luo, Hong-Yu Li, Soma Chakraborty, Robert Morbitzer +7 more
2019Plant Biotechnology Journal29 citations Open access
Semantic Scholar
Transposon insertional mutagenesis in rice.
N. Upadhyaya, Qian-Hao Zhu, R. Bhat
2011Methods in molecular biology27 citations
Semantic Scholar
Ectopic expression of the spike protein of Rice Ragged Stunt Oryzavirus in transgenic rice plants inhibits transmission of the virus to insects
Chao-Gang Shao, Jian-Hua Wu, Guo-Ying Zhou, Gang Sun +7 more
2003Molecular breeding27 citations
Semantic Scholar

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