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J. Ambite · SciRah

Researcher profile · Semantic Scholar

J. Ambite

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J. Ambite — researcher profile on SciRah

h-index: 41
Works: 194
Citations: 6,325

Most-cited papers

Genetic analyses of diverse populations improves discovery for complex traits
G. Wojcik, M. Graff, Katherine K. Nishimura, R. Tao +82 more
2019Nature931 citations Open access
Semantic Scholar
Exploiting spatiotemporal patterns for accurate air quality forecasting using deep learning
Yijun Lin, Nikhit Mago, Yu Gao, Yaguang Li +3 more
2018SIGSPATIAL/GIS145 citations
Semantic Scholar
SchizConnect: Mediating Neuroimaging Databases on Schizophrenia and Related Disorders for Large-Scale Integration
Lei Wang, Kathryn I. Alpert, V. Calhoun, D. Cobia +9 more
2015NeuroImage112 citations Open access
Semantic Scholar
Learning the Semantics of Structured Data Sources
M. Taheriyan, Craig A. Knoblock, Pedro A. Szekely, J. Ambite
2016Journal of Web Semantics103 citations Open access
Semantic Scholar
Secure neuroimaging analysis using federated learning with homomorphic encryption
Dimitris Stripelis, Hamza Saleem, Tanmay Ghai, Nikhil J. Dhinagar +7 more
2021Symposium on Medical Information Processing and Analysis80 citations Open access
Semantic Scholar
Rapid detection of identity-by-descent tracts for mega-scale datasets
R. Shemirani, G. Belbin, C. Avery, E. Kenny +2 more
2019Nature Communications54 citations Open access
Semantic Scholar
Mining Public Datasets for Modeling Intra-City PM2.5 Concentrations at a Fine Spatial Resolution
Yijun Lin, Yao-Yi Chiang, Fan Pan, Dimitrios Stripelis +3 more
2017SIGSPATIAL/GIS54 citations Open access
Semantic Scholar
Semi-Synchronous Federated Learning for Energy-Efficient Training and Accelerated Convergence in Cross-Silo Settings
Dimitris Stripelis, P. Thompson, J. Ambite
2021ACM Transactions on Intelligent Systems and Technology53 citations Open access
Semantic Scholar
Membership Inference Attacks on Deep Regression Models for Neuroimaging
Umang Gupta, Dimitris Stripelis, Pradeep K. Lam, Paul M. Thompson +2 more
2021International Conference on Medical Imaging with Deep Learning51 citations
Semantic Scholar
Genetics of Chronic Kidney Disease Stages Across Ancestries: The PAGE Study
B. Lin, G. Nadkarni, R. Tao, M. Graff +18 more
2019Frontiers in Genetics42 citations Open access
Semantic Scholar
Pleiotropic effects of genetic risk variants for other cancers on colorectal cancer risk: PAGE, GECCO, and CCFR Consortia
Iona Cheng, Jonathan M. Kocarnik, L. Dumitrescu, N. Lindor +63 more
2013Gut39 citations Open access
Semantic Scholar
Applying Multivariate Segmentation Methods to Human Activity Recognition From Wearable Sensors’ Data
Kenan Li, R. Habre, Huiyu Deng, Robert Urman +12 more
2018JMIR mHealth and uHealth38 citations Open access
Semantic Scholar
Scaling Neuroscience Research Using Federated Learning
Dimitris Stripelis, J. Ambite, Pradeep K. Lam, Paul M. Thompson
2021IEEE International Symposium on Biomedical Imaging34 citations Open access
Semantic Scholar
The genetic underpinnings of variation in ages at menarche and natural menopause among women from the multi-ethnic Population Architecture using Genomics and Epidemiology (PAGE) Study: A trans-ethnic meta-analysis
L. Fernández-Rhodes, Jennifer R. Malinowski, Yu-Jie Wang, Ran Tao +41 more
2018PLoS ONE33 citations Open access
Semantic Scholar
A federated learning architecture for secure and private neuroimaging analysis
Dimitris Stripelis, Umang Gupta, Hamza Saleem, Nikhil J. Dhinagar +8 more
2024Patterns32 citations Open access
Semantic Scholar
Leveraging Linked Data to Discover Semantic Relations Within Data Sources
M. Taheriyan, Craig A. Knoblock, Pedro A. Szekely, J. Ambite
2016International Workshop on the Semantic Web32 citations
Semantic Scholar
Finding Prerequisite Relations using the Wikipedia Clickstream
Mohsen Sayyadiharikandeh, Jonathan Gordon, J. Ambite, Kristina Lerman
2019The Web Conference31 citations Open access
Semantic Scholar
The PAGE Study: How Genetic Diversity Improves Our Understanding of the Architecture of Complex Traits
G. Wojcik, M. Graff, Katherine K. Nishimura, R. Tao +82 more
2018bioRxiv31 citations Open access
Semantic Scholar
Evaluation of Transfer Learning Methods for Detecting Alzheimer’s Disease with Brain MRI
Nikhil J. Dhinagar, S. Thomopoulos, P. Rajagopalan, Dimitris Stripelis +3 more
2022bioRxiv30 citations Open access
Semantic Scholar
SchizConnect: Virtual Data Integration in Neuroimaging
J. Ambite, Marcelo Tallis, Kathryn I. Alpert, D. Keator +7 more
2015Data Integration in the Life Sciences29 citations Open access
Semantic Scholar
Multi-Ancestral Analysis of Inflammation-Related Genetic Variants and C-Reactive Protein in the Population Architecture using Genomics and Epidemiology (PAGE) Study
Jonathan M. Kocarnik, S. Pendergrass, C. Carty, J. Pankow +30 more
2014Circulation: Cardiovascular Genetics29 citations Open access
Semantic Scholar
Genetic Diversity Turns a New PAGE in Our Understanding of Complex Traits
G. Wojcik, M. Graff, Katherine K. Nishimura, R. Tao +70 more
201728 citations Open access
Semantic Scholar
Investigation of gene-by-sex interactions for lipid traits in diverse populations from the population architecture using genomics and epidemiology study
Kira C. Taylor, C. Carty, L. Dumitrescu, P. Bůžková +25 more
2013BMC Genetics28 citations Open access
Semantic Scholar
A Scalable Approach to Learn Semantic Models of Structured Sources
M. Taheriyan, Craig A. Knoblock, Pedro A. Szekely, J. Ambite
2014International Computer Science Conference27 citations
Semantic Scholar
Minority-centric meta-analyses of blood lipid levels identify novel loci in the Population Architecture using Genomics and Epidemiology (PAGE) study
Yao Hu, M. Graff, J. Haessler, S. Buyske +49 more
2020PLoS Genetics26 citations Open access
Semantic Scholar
Replication of associations between GWAS SNPs and melanoma risk in the Population Architecture using Genomics and Epidemiology (PAGE) study
Jonathan M. Kocarnik, S. Park, Jia-Li Han, L. Dumitrescu +21 more
2014Journal of Investigative Dermatology26 citations Open access
Semantic Scholar
Using dynamic time warping self-organizing maps to characterize diurnal patterns in environmental exposures
Kenan Li, K. Sward, Huiyu Deng, J. Morrison +6 more
2020Scientific Reports25 citations Open access
Semantic Scholar
Northwestern University Schizophrenia Data Sharing for SchizConnect: A Longitudinal Dataset for Large-Scale Integration
Alexander Kogan, Kathryn I. Alpert, J. Ambite, Daniel S. Marcus +1 more
2015NeuroImage25 citations Open access
Semantic Scholar
Pleiotropic and Sex-Specific Effects of Cancer GWAS SNPs on Melanoma Risk in the Population Architecture Using Genomics and Epidemiology (PAGE) Study
Jonathan M. Kocarnik, S. Park, Jia-Li Han, L. Dumitrescu +22 more
2015PLoS ONE25 citations Open access
Semantic Scholar
Discovery, fine-mapping, and conditional analyses of genetic variants associated with C-reactive protein in multiethnic populations using the Metabochip in the Population Architecture using Genomics and Epidemiology (PAGE) study
Jonathan M. Kocarnik, Melissa A. Richard, M. Graff, J. Haessler +31 more
2018Human Molecular Genetics24 citations Open access
Semantic Scholar
Data Integration in the Life Sciences
N. Ashish, J. Ambite
2015Lecture Notes in Computer Science24 citations Open access
Semantic Scholar
Comparison of deep learning architectures for predicting amyloid positivity in Alzheimer’s disease, mild cognitive impairment, and healthy aging, from T1-weighted brain structural MRI
Tamoghna Chattopadhyay, Saket Ozarkar, Ketaki Buwa, N. Joshy +6 more
2024Frontiers in Neuroscience23 citations Open access
Semantic Scholar
Semi-Synchronous Federated Learning
Dimitris Stripelis, J. Ambite
2021arXiv.org23 citations
Semantic Scholar
NSEEN: Neural Semantic Embedding for Entity Normalization
Shobeir Fakhraei, Joel Mathew, J. Ambite
2018ECML/PKDD20 citations Open access
Semantic Scholar
Towards a fine-scale population health monitoring system
G. Belbin, S. Wenric, S. Cullina, B. Glicksberg +17 more
2019bioRxiv16 citations Open access
Semantic Scholar
Democratizing data science through data science training
John D. Van Horn, Lily Fierro, J. Kamdar, Jonathan Gordon +10 more
2018Pacific Symposium on Biocomputing16 citations Open access
Semantic Scholar
Federated Progressive Sparsification (Purge, Merge, Tune)+
Dimitris Stripelis, Umang Gupta, G. V. Steeg, J. Ambite
2022arXiv.org15 citations Open access
Semantic Scholar
NERO: a biomedical named-entity (recognition) ontology with a large, annotated corpus reveals meaningful associations through text embedding
Kanix Wang, Robert Stevens, Halima Alachram, Yu Li +21 more
2020npj Systems Biology and Applications15 citations Open access
Semantic Scholar
Biomedical Named Entity Recognition via Reference-Set Augmented Bootstrapping
Joel Mathew, Shobeir Fakhraei, J. Ambite
2019arXiv.org15 citations
Semantic Scholar
Secure Federated Learning for Neuroimaging
Dimitris Stripelis, Umang Gupta, Hamza Saleem, Nikhil J. Dhinagar +9 more
2022arXiv.org14 citations Open access
Semantic Scholar
A phenome-wide association study (PheWAS) in the Population Architecture using Genomics and Epidemiology (PAGE) study reveals potential pleiotropy in African Americans
S. Pendergrass, S. Buyske, Janina M. Jeff, A. Frase +25 more
2019PLoS ONE14 citations Open access
Semantic Scholar
Optimizing the Chase: Scalable Data Integration under Constraints
G. Konstantinidis, J. Ambite
2014Proceedings of the VLDB Endowment14 citations
Semantic Scholar
Leveraging Linked Data to Infer Semantic Relations within Structured Sources
M. Taheriyan, Craig A. Knoblock, Pedro A. Szekely, J. Ambite +1 more
2015COLD13 citations
Semantic Scholar
Building Autocorrelation-Aware Representations for Fine-Scale Spatiotemporal Prediction
Yijun Lin, Yao-Yi Chiang, M. Franklin, S. Eckel +1 more
2020Industrial Conference on Data Mining12 citations Open access
Semantic Scholar
BD2K ERuDIte: the Educational Resource Discovery Index for Data Science
J. Ambite, Lily Fierro, Florian Geigl, Jonathan Gordon +3 more
2017The Web Conference12 citations Open access
Semantic Scholar
GEM: The GAAIN Entity Mapper
N. Ashish, P. Dewan, J. Ambite, A. Toga
2015Data Integration in the Life Sciences12 citations Open access
Semantic Scholar
Predicted gene expression in ancestrally diverse populations leads to discovery of susceptibility loci for lifestyle and cardiometabolic traits.
H. Highland, G. Wojcik, M. Graff, Katherine K. Nishimura +32 more
2022American Journal of Human Genetics11 citations Open access
Semantic Scholar
Accelerating Federated Learning in Heterogeneous Data and Computational Environments
Dimitris Stripelis, J. Ambite
2020arXiv.org11 citations
Semantic Scholar
A Scalable Data Integration and Analysis Architecture for Sensor Data of Pediatric Asthma
Dimitris Stripelis, J. Ambite, Yao-Yi Chiang, S. Eckel +1 more
2017IEEE International Conference on Data Engineering11 citations Open access
Semantic Scholar
Pediatric Research Using Integrated Sensor Monitoring Systems (PRISMS): Applying Sensor Technology and Informatics to Better Understand Asthma
K. Sward, Alex A. T. Bui, J. Ambite, M. Dellarco
2016American Medical Informatics Association Annual Symposium11 citations
Semantic Scholar

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