Yoram Zarai

Most-cited papers

Combined turbo equalization and turbo decoding
D. Raphaeli, Yoram Zarai
1998IEEE Communications Letters143 citations
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Combined turbo equalization and turbo decoding
D. Raphaeli, Yoram Zarai
1997GLOBECOM 97. IEEE Global Telecommunications Conference. Conference Record84 citations
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Maximizing protein translation rate in the non-homogeneous ribosome flow model: a convex optimization approach
Gilad Poker, Yoram Zarai, M. Margaliot, T. Tuller
2014Journal of the Royal Society Interface54 citations Open access
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On the Ribosomal Density that Maximizes Protein Translation Rate
Yoram Zarai, M. Margaliot, T. Tuller
2016PLoS ONE40 citations Open access
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Ribosome Flow Model on a Ring
Alon Raveh, Yoram Zarai, M. Margaliot, T. Tuller
2015IEEE/ACM Transactions on Computational Biology & Bioinformatics40 citations
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Explicit Expression for the Steady-State Translation Rate in the Infinite-Dimensional Homogeneous Ribosome Flow Model
Yoram Zarai, M. Margaliot, T. Tuller
2013IEEE/ACM Transactions on Computational Biology & Bioinformatics31 citations
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Dynamical Systems With a Cyclic Sign Variation Diminishing Property
Tsuff Ben Avraham, G. Sharon, Yoram Zarai, M. Margaliot
2018IEEE Transactions on Automatic Control26 citations Open access
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eIF3 mRNA selectivity profiling reveals eIF3k as a cancer‐relevant regulator of ribosome content
Haoran Duan, Siqiong Zhang, Yoram Zarai, Rupert Oellinger +10 more
2022bioRxiv25 citations Open access
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Optimal Down Regulation of mRNA Translation
Yoram Zarai, M. Margaliot, T. Tuller
2016Scientific Reports25 citations Open access
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Networks of ribosome flow models for modeling and analyzing intracellular traffic
Itzik Nanikashvili, Yoram Zarai, A. Ovseevich, T. Tuller +1 more
2018Scientific Reports22 citations Open access
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Ribosome flow model with extended objects
Yoram Zarai, M. Margaliot, T. Tuller
2017Journal of the Royal Society Interface21 citations Open access
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Optimal Translation Along a Circular mRNA
Yoram Zarai, A. Ovseevich, M. Margaliot
2017Scientific Reports18 citations Open access
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A deterministic mathematical model for bidirectional excluded flow with Langmuir kinetics
Yoram Zarai, M. Margaliot, T. Tuller
2016PLoS ONE15 citations Open access
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Computational analysis of the oscillatory behavior at the translation level induced by mRNA levels oscillations due to finite intracellular resources
Yoram Zarai, T. Tuller
2018PLoS Comput. Biol.12 citations Open access
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Controlling mRNA Translation
Yoram Zarai, M. Margaliot, Eduardo Sontag, T. Tuller
2016IEEE/ACM Transactions on Computational Biology & Bioinformatics12 citations Open access
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A deterministic model for one-dimensional excluded flow with local interactions
Yoram Zarai, M. Margaliot, A. Kolomeisky
2017PLoS ONE11 citations Open access
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Maximizing Protein Translation Rate in the Ribosome Flow Model: The Homogeneous Case
Yoram Zarai, M. Margaliot, T. Tuller
2014IEEE/ACM Transactions on Computational Biology & Bioinformatics11 citations Open access
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On Approximating Contractive Systems
Meir Botner, Yoram Zarai, M. Margaliot, L. Grüne
2017IEEE Transactions on Automatic Control9 citations Open access
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Evolutionary selection against short nucleotide sequences in viruses and their related hosts
Yoram Zarai, Zohar Zafrir, Bunpote Siridechadilok, Amporn Suphatrakul +3 more
2020DNA Research7 citations Open access
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Modeling and Analyzing the Flow of Molecular Machines in Gene Expression
Yoram Zarai, M. Margaliot, T. Tuller
20186 citations
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Analyzing Linear Communication Networks Using the Ribosome Flow Model
Yoram Zarai, O. Mendel, M. Margaliot
20152015 IEEE International Conference on Computer and Information Technology; Ubiquitous Computing and Communications; Dependable, Autonomic and Secure Computing; Pervasive Intelligence and Computing6 citations Open access
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On the exponent of several classes of oscillatory matrices
Yoram Zarai, M. Margaliot
2019Linear Algebra and its Applications5 citations Open access
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Controlling mRNA Translation
Yoram Zarai, M. Margaliot, Eduardo Sontag, T. Tuller
20165 citations
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On Minimizing the Maximal Characteristic Frequency of a Linear Chain
Yoram Zarai, M. Margaliot
2017IEEE Transactions on Automatic Control4 citations
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Integrating Copies Obtained from Old and New Preservation Efforts
Yoram Zarai, Tamar Lavee, N. Dershowitz, Lior Wolf
2013IEEE International Conference on Document Analysis and Recognition4 citations
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Controlling the ribosomal density profile in mRNA translation
Yoram Zarai, M. Margaliot, Eduardo Sontag, T. Tuller
2016IEEE Conference on Decision and Control3 citations
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Hilbert Space-Filling by Piecewise-Linear Index Transformation
Yoram Zarai, S. Rakib
2008IEEE Signal Processing Letters3 citations
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Correction: On the Ribosomal Density that Maximizes Protein Translation Rate
Yoram Zarai, M. Margaliot, T. Tuller
2017PLoS ONE1 citations Open access
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Correction: Computational analysis of the oscillatory behavior at the translation level induced by mRNA levels oscillations due to finite intracellular resources
Yoram Zarai, T. Tuller
2019PLoS Comput. Biol.0 citations Open access
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Supplementary material from "Ribosome flow model with extended objects"
Yoram Zarai, M. Margaliot, T. Tuller
20170 citations
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A Nonlinear Consensus Algorithm Derived from Statistical Physics
M. Margaliot, Alon Raveh, Yoram Zarai
20140 citations
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On the Structure of the Initiation and Elongation Rates that Maximize Protein Production in the Ribosome Flow Model
Yoram Zarai, M. Margaliot
20140 citations
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