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K. Jerome · SciRah

Researcher profile · Semantic Scholar

K. Jerome

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K. Jerome — researcher profile on SciRah

h-index: 68
Works: 407
Citations: 17K

Most-cited papers

Neutralizing Antibodies Correlate with Protection from SARS-CoV-2 in Humans during a Fishery Vessel Outbreak with a High Attack Rate
A. Addetia, K. H. Crawford, Adam S. Dingens, Haiying Zhu +5 more
2020Journal of Clinical Microbiology281 citations Open access
Semantic Scholar
Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California
Xian-Ding Deng, W. Gu, Scot Federman, L. du Plessis +46 more
2020Science246 citations Open access
Semantic Scholar
Cytomegalovirus-specific T-cell Reconstitution following Letermovir Prophylaxis after Hematopoietic Cell Transplantation.
Danniel Zamora, E. Duke, Hu Xie, Bradley C. Edmison +11 more
2021Blood153 citations Open access
Semantic Scholar
SARS-CoV-2 ORF6 Disrupts Bidirectional Nucleocytoplasmic Transport through Interactions with Rae1 and Nup98
A. Addetia, N. Lieberman, Q. Phung, Tien-Ying Hsiang +8 more
2021mBio124 citations Open access
Semantic Scholar
A highly multiplexed droplet digital PCR assay to measure the intact HIV-1 proviral reservoir
Claire N. Levy, S. Hughes, Pavitra Roychoudhury, D. Reeves +18 more
2021Cell Reports Medicine89 citations Open access
Semantic Scholar
Evaluation of Cell-Based and Surrogate SARS-CoV-2 Neutralization Assays
Anton M. Sholukh, A. Fiore-Gartland, E. S. Ford, Maurine D. Miner +26 more
2021Journal of Clinical Microbiology86 citations Open access
Semantic Scholar
Trajectory of Viral RNA Load Among Persons With Incident SARS-CoV-2 G614 Infection (Wuhan Strain) in Association With COVID-19 Symptom Onset and Severity
H. S. Stankiewicz Karita, Tracy Qi Dong, C. Johnston, K. Neuzil +22 more
2022JAMA Network Open82 citations Open access
Semantic Scholar
Metagenomic analysis reveals clinical SARS-CoV-2 infection and bacterial or viral superinfection and colonization
V. Peddu, Ryan C. Shean, Hong Xie, Lasata Shrestha +10 more
2020Clinical Chemistry66 citations Open access
Semantic Scholar
Efficacy, safety, and immunogenicity of a booster regimen of Ad26.COV2.S vaccine against COVID-19 (ENSEMBLE2): results of a randomised, double-blind, placebo-controlled, phase 3 trial
K. Hardt, A. Vandebosch, J. Sadoff, Mathieu le Gars +284 more
2022Lancet. Infectious Diseases (Print)65 citations Open access
Semantic Scholar
Hospitalization and mortality associated with SARS-CoV-2 viral clades in COVID-19
Kenji Nakamichi, Jolie Z. Shen, Cecilia S. Lee, Aaron Y. Lee +9 more
2021Scientific Reports58 citations Open access
Semantic Scholar
Evaluation of Commercially Available High-Throughput SARS-CoV-2 Serologic Assays for Serosurveillance and Related Applications
M. Stone, Eduard Grebe, H. Sulaeman, C. di Germanio +16 more
2022Emerging Infectious Diseases55 citations Open access
Semantic Scholar
Robust Expansion of HIV CAR T Cells Following Antigen Boosting in ART-Suppressed Nonhuman Primates.
Blake J. Rust, L. Kean, Lucrezia Colonna, K. Brandenstein +12 more
2020Blood51 citations Open access
Semantic Scholar
Multiplex CRISPR/Cas9 genome editing in hematopoietic stem cells for fetal hemoglobin reinduction generates chromosomal translocations
Clare Samuelson, S. Radtke, Haiying Zhu, Mallory J Llewellyn +6 more
2021Molecular Therapy: Methods & Clinical Development46 citations Open access
Semantic Scholar
Anti-SARS-CoV-2 Antibody Levels Measured by the AdviseDx SARS-CoV-2 Assay Are Concordant with Previously Available Serologic Assays but Are Not Fully Predictive of Sterilizing Immunity
B. T. Bradley, A. Bryan, S. Fink, E. Goecker +18 more
2021Journal of Clinical Microbiology46 citations Open access
Semantic Scholar
Predicting infectivity: comparing four PCR‐based assays to detect culturable SARS‐CoV‐2 in clinical samples
E. Bruce, M. Mills, Reigran Sampoleo, G. Perchetti +8 more
2021EMBO Molecular Medicine46 citations Open access
Semantic Scholar
Cytomegalovirus Breakthrough and Resistance During Letermovir Prophylaxis
G. Perchetti, M. Biernacki, Hu Xie, J. Castor +9 more
2023Bone Marrow Transplantation43 citations
Semantic Scholar
HIV reservoir quantification using cross-subtype multiplex ddPCR
N. A. Cassidy, Carolyn S. Fish, Claire N. Levy, Pavitra Roychoudhury +10 more
2021iScience43 citations Open access
Semantic Scholar
Measuring infectious SARS-CoV-2 in clinical samples reveals a higher viral titer:RNA ratio for Delta and Epsilon vs. Alpha variants
Hannah W. Despres, M. Mills, David J. Shirley, Madaline M. Schmidt +5 more
2022Proceedings of the National Academy of Sciences of the United States of America38 citations Open access
Semantic Scholar
Optimization of AAV vectors to target persistent viral reservoirs
Rossana Colón-Thillet, K. Jerome, Daniel Stone
2021Virology Journal38 citations Open access
Semantic Scholar
Variants of Concern Are Overrepresented Among Postvaccination Breakthrough Infections of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in Washington State
Abbye E. McEwen, Seth A Cohen, C. Bryson-Cahn, Catherine Liu +17 more
2021medRxiv38 citations Open access
Semantic Scholar
Viral Resistance Analyses From the Remdesivir Phase 3 Adaptive COVID-19 Treatment Trial-1 (ACTT-1)
C. Hedskog, Lauren Rodriguez, Pavitra Roychoudhury, Meei-Li W. Huang +10 more
2023Journal of Infectious Diseases37 citations Open access
Semantic Scholar
Quantitative measurement of infectious virus in SARS-CoV-2 Alpha, Delta and Epsilon variants reveals higher infectivity (viral titer:RNA ratio) in clinical samples containing the Delta and Epsilon variants
Hannah W. Despres, M. Mills, David J. Shirley, Madaline M. Schmidt +4 more
2021medRxiv37 citations Open access
Semantic Scholar
Viral Shedding 1 Year Following First-Episode Genital HSV-1 Infection.
C. Johnston, A. Magaret, Hyunju Son, Michael E. Stern +12 more
2022Journal of the American Medical Association (JAMA)36 citations Open access
Semantic Scholar
Epstein–Barr Virus and Human Herpesvirus-6 Reactivation in Acute COVID-19 Patients
Bailey Brooks, Christina Tancredi, Yu-Feng Song, Alemu Tekewe Mogus +8 more
2022Viruses35 citations Open access
Semantic Scholar
Trajectory of viral load in a prospective population-based cohort with incident SARS-CoV-2 G614 infection
H. S. Stankiewicz Karita, Tracy Qi Dong, C. Johnston, K. Neuzil +22 more
2021medRxiv35 citations Open access
Semantic Scholar
SARS-CoV-2 Viral Load on Admission Is Associated With 30-Day Mortality
A. Bryan, S. Fink, Meghan A. Gattuso, Gregory G. Pepper +6 more
2020Open Forum Infectious Diseases35 citations Open access
Semantic Scholar
Specific allelic discrimination of N501Y and other SARS‐CoV‐2 mutations by ddPCR detects B.1.1.7 lineage in Washington State
G. Perchetti, Hai-Ying Zhu, M. Mills, L. Shrestha +10 more
2021medRxiv34 citations Open access
Semantic Scholar
Tissue-Resident-Memory CD8+ T Cells Bridge Innate Immune Responses in Neighboring Epithelial Cells to Control Human Genital Herpes
T. Peng, Khamsone Phasouk, Catherine N Sodroski, Sijie Sun +18 more
2021Frontiers in Immunology33 citations Open access
Semantic Scholar
Viral genomes reveal patterns of the SARS-CoV-2 outbreak in Washington State
N. Müller, C. Wagner, Chris D. Frazar, Pavitra Roychoudhury +39 more
2021Science Translational Medicine32 citations Open access
Semantic Scholar
Respiratory viruses in hematopoietic cell transplant candidates: impact of preexisting lower tract disease on outcomes
Yaejean Kim, A. Waghmare, Hu Xie, L. Holmberg +7 more
2022Blood Advances31 citations Open access
Semantic Scholar
Performance characteristics of the Abbott Alinity m SARS-CoV-2 assay
G. Perchetti, Gregory G. Pepper, Lasata Shrestha, Katrina LaTurner +4 more
2021Journal of Clinical Virology31 citations Open access
Semantic Scholar
Adeno-associated virus vectors and neurotoxicity—lessons from preclinical and human studies
Daniel Stone, M. Aubert, K. Jerome
2023Gene Therapy27 citations Open access
Semantic Scholar
Detection of SARS-CoV-2 by bronchoscopy after negative nasopharyngeal testing: Stay vigilant for COVID-19
Kathleen J. Ramos, Siddhartha G. Kapnadak, B. Collins, P. Pottinger +8 more
2020Respiratory Medicine Case Reports24 citations Open access
Semantic Scholar
Narrow transmission bottlenecks and limited within-host viral diversity during a SARS-CoV-2 outbreak on a fishing boat
William W. Hannon, Pavitra Roychoudhury, Hong Xie, Lasata Shrestha +4 more
2022bioRxiv19 citations Open access
Semantic Scholar
Memory T cells possess an innate-like function in local protection from mucosal infection
Tanvi Arkatkar, Veronica A. Davé, Irene Cruz Talavera, Jessica B. Graham +15 more
2023Journal of Clinical Investigation18 citations Open access
Semantic Scholar
Novel factors to predict respiratory viral disease progression in allogeneic hematopoietic cell transplant recipients
C. Ogimi, Hu Xie, A. Waghmare, K. Jerome +5 more
2022Bone Marrow Transplantation18 citations Open access
Semantic Scholar
Rapid and accurate identification of SARS-CoV-2 Omicron variants using droplet digital PCR (RT-ddPCR)
Margaret G. Mills, Pooneh Hajian, Shah Mohamed Bakhash, Hong Xie +8 more
2022medRxiv15 citations Open access
Semantic Scholar
Phylogenetic estimates of SARS-CoV-2 introductions into Washington State
D. Tordoff, A. Greninger, Pavitra Roychoudhury, L. Shrestha +6 more
2021medRxiv15 citations Open access
Semantic Scholar
HHV-6 Reactivation and Disease after Allogeneic Hematopoietic Cell Transplantation in the Era of Letermovir for CMV Prophylaxis
E. Kampouri, Danniel Zamora, Erika S. Kiem, Winnie Liu +12 more
2023Clinical Microbiology and Infection12 citations
Semantic Scholar
Rapidly identifying new coronavirus mutations of potential concern in the Omicron variant using an unsupervised learning strategy
L. Zhao, T. Lybrand, Peter B. Gilbert, Thomas H. Payne +3 more
2022Scientific Reports12 citations Open access
Semantic Scholar
Mutations in viral nucleocapsid protein and endoRNase are discovered to associate with COVID19 hospitalization risk
L. Zhao, Pavitra Roychoudhury, Peter B. Gilbert, J. Schiffer +14 more
2022Scientific Reports12 citations Open access
Semantic Scholar
Risk factors for seasonal human coronavirus lower respiratory tract infection after hematopoietic cell transplantation
C. Ogimi, Hu Xie, A. Waghmare, Masumi Ueda Oshima +5 more
2021Blood Advances11 citations Open access
Semantic Scholar
HIV reservoir quantification by five-target multiplex droplet digital PCR
Claire N. Levy, Sean M. Hughes, Pavitra Roychoudhury, Chelsea Amstuz +5 more
2021STAR Protocols11 citations Open access
Semantic Scholar
Endogenously Produced SARS-CoV-2 Specific IgG Antibodies May Have a Limited Impact on Clearing Nasal Shedding of Virus during Primary Infection in Humans
Shuyi Yang, K. Jerome, A. Greninger, J. Schiffer +1 more
2021Viruses11 citations Open access
Semantic Scholar
Tracking SARS-CoV-2 Spike Protein Mutations in the United States (2020/01 – 2021/03) Using a Statistical Learning Strategy
L. Zhao, T. Lybrand, P. Gilbert, T. Hawn +6 more
2021bioRxiv11 citations Open access
Semantic Scholar
Protocol for high-throughput reservoir quantification across global HIV subtypes using a cross-subtype intact proviral DNA assay
Carolyn S. Fish, N. A. Cassidy, Claire N. Levy, S. Hughes +4 more
2022STAR Protocols10 citations Open access
Semantic Scholar
Correlation of Initial Upper Respiratory Tract Viral Burden with Progression to Lower Tract Disease in Adult Allogeneic Hematopoietic Cell Transplant Recipients
C. Ogimi, Hu Xie, A. Waghmare, K. Jerome +4 more
2022Journal of Clinical Virology10 citations Open access
Semantic Scholar
Surveillance of Vermont wildlife in 2021–2022 reveals no detected SARS-CoV-2 viral RNA
Hannah W. Despres, Margaret G. Mills, Madaline M. Schmidt, Jolene P. Gov +52 more
2023Scientific Reports9 citations Open access
Semantic Scholar
Molecular Analysis of SARS-CoV-2 Lineages in Armenia
D. Avetyan, Siras Hakobyan, M. Nikoghosyan, Lilit Ghukasyan +17 more
2022Viruses9 citations Open access
Semantic Scholar
Identification of Omicron-Delta Coinfections Using PCR-Based Genotyping
Pavitra Roychoudhury, Shi-Shi Luo, K. Hayashibara, P. Hajian +15 more
2022Microbiology spectrum9 citations Open access
Semantic Scholar

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