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Shigeki Yamamura · SciRah

Researcher profile · Semantic Scholar

Shigeki Yamamura

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Shigeki Yamamura — researcher profile on SciRah

h-index: 16
Works: 51
Citations: 880

Most-cited papers

Microbiology of inorganic arsenic: From metabolism to bioremediation.
Shigeki Yamamura, S. Amachi
2014Journal of Bioscience and Bioengineering157 citations
Semantic Scholar
Bacillus selenatarsenatis sp. nov., a selenate- and arsenate-reducing bacterium isolated from the effluent drain of a glass-manufacturing plant.
Shigeki Yamamura, M. Yamashita, N. Fujimoto, M. Kuroda +4 more
2007International Journal of Systematic and Evolutionary Microbiology76 citations Open access
Semantic Scholar
Dissimilatory arsenate reduction by a facultative anaerobe, Bacillus sp. strain SF-1.
Shigeki Yamamura, M. Ike, M. Fujita
2003Journal of Bioscience and Bioengineering62 citations
Semantic Scholar
Effect of extracellular electron shuttles on arsenic-mobilizing activities in soil microbial communities.
Shigeki Yamamura, Takayuki Sudo, Mirai Watanabe, S. Tsuboi +3 more
2018Journal of Hazardous Materials60 citations
Semantic Scholar
Removal of arsenic from contaminated soils by microbial reduction of arsenate and quinone.
Shigeki Yamamura, Mirai Watanabe, Masaya Kanzaki, S. Soda +1 more
2008Environmental Science and Technology45 citations
Semantic Scholar
Ecological niche separation in the Polynucleobacter subclusters linked to quality of dissolved organic matter: a demonstration using a high sensitivity cultivation-based approach.
Keiji Watanabe, N. Komatsu, T. Kitamura, Y. Ishii +9 more
2012Environmental Microbiology41 citations
Semantic Scholar
Microbial nitrification in throughfall of a Japanese cedar associated with archaea from the tree canopy
Keiji Watanabe, A. Kohzu, W. Suda, Shigeki Yamamura +5 more
2016SpringerPlus39 citations Open access
Semantic Scholar
Effect of antibiotics on redox transformations of arsenic and diversity of arsenite-oxidizing bacteria in sediment microbial communities.
Shigeki Yamamura, Keiji Watanabe, W. Suda, S. Tsuboi +1 more
2014Environmental Science and Technology37 citations
Semantic Scholar
Production of two morphologically different antimony trioxides by a novel antimonate-reducing bacterium, Geobacter sp. SVR.
Shigeki Yamamura, Chisato Iida, Yayoi Kobayashi, Mirai Watanabe +1 more
2021Journal of Hazardous Materials35 citations
Semantic Scholar
A novel dimethylsulfoxide reductase family of molybdenum enzyme, Idr, is involved in iodate respiration by Pseudomonas sp. SCT.
C. Yamazaki, Sumie Kashiwa, Ayaka Horiuchi, Y. Kasahara +2 more
2020Environmental Microbiology34 citations
Semantic Scholar
Pollution of montane soil with Cu, Zn, As, Sb, Pb, and nitrate in Kanto, Japan.
T. Takamatsu, Mirai Watanabe, M. Koshikawa, T. Murata +2 more
2010Science of the Total Environment34 citations
Semantic Scholar
Soil Microbial Communities Involved in Reductive Dissolution of Arsenic from Arsenate-laden Minerals with Different Carbon Sources.
Shigeki Yamamura, Hibiki Kurasawa, Y. Kashiwabara, T. Hori +3 more
2019Environmental Science and Technology33 citations Open access
Semantic Scholar
Arsenic extraction from solid phase using a dissimilatory arsenate-reducing bacterium.
Shigeki Yamamura, Norifumi Yamamoto, M. Ike, M. Fujita
2005Journal of Bioscience and Bioengineering28 citations
Semantic Scholar
Reduction kinetics of As (V) to As (III) by a dissimilatory arsenate-reducing bacterium, Bacillus sp. SF-1.
S. Soda, Shigeki Yamamura, Hong Zhou, M. Ike +1 more
2006Biotechnology and Bioengineering27 citations
Semantic Scholar
Diversity of alkane hydroxylase genes on the rhizoplane of grasses planted in petroleum-contaminated soils
S. Tsuboi, Shigeki Yamamura, T. Nakajima-Kambe, K. Iwasaki
2015SpringerPlus18 citations Open access
Semantic Scholar
Dry deposition of acidic air pollutants to tree leaves, determined by a modified leaf-washing technique
Mirai Watanabe, T. Takamatsu, M. Koshikawa, Shigeki Yamamura +1 more
200818 citations
Semantic Scholar
Possible Involvement of a Tetrathionate Reductase Homolog in Dissimilatory Arsenate Reduction by Anaeromyxobacter sp. Strain PSR-1
Fumika Muramatsu, Mimori Tonomura, Mikina Yamada, Y. Kasahara +3 more
2020Applied and Environmental Microbiology16 citations Open access
Semantic Scholar
137Cs transfer from canopies onto forest floors at Mount Tsukuba in the four years following the Fukushima nuclear accident.
T. Nishikiori, Mirai Watanabe, M. Koshikawa, Keiji Watanabe +2 more
2019Science of the Total Environment16 citations Open access
Semantic Scholar
Potential for microbially mediated redox transformations and mobilization of arsenic in uncontaminated soils.
Shigeki Yamamura, Mirai Watanabe, N. Yamamoto, K. Sei +1 more
2009Chemosphere14 citations
Semantic Scholar
Microbial biomass and nitrogen transformations in surface soils strongly acidified by volcanic hydrogen sulfide deposition in Osorezan, Japan
Mirai Watanabe, Shigeki Yamamura, T. Takamatsu, M. Koshikawa +5 more
201012 citations Open access
Semantic Scholar
Linking Temporal Changes in Bacterial Community Structures with the Detection and Phylogenetic Analysis of Neutral Metalloprotease Genes in the Sediments of a Hypereutrophic Lake
S. Tsuboi, Shigeki Yamamura, A. Imai, Takayuki Satou +1 more
2014Microbes and Environments10 citations Open access
Semantic Scholar
Growth rates and tolerance to low water temperatures of freshwater bacterioplankton strains: ecological insights from shallow hypereutrophic lakes in Japan
Keiji Watanabe, Y. Ishii, N. Komatsu, T. Kitamura +4 more
2017Hydrobiologia9 citations
Semantic Scholar
Genomic Analysis of Pseudomonas sp. Strain SCT, an Iodate-Reducing Bacterium Isolated from Marine Sediment, Reveals a Possible Use for Bioremediation
Masafumi Harada, Kohei Ito, N. Nakajima, Shigeki Yamamura +3 more
2019G3: Genes, Genomes, Genetics8 citations Open access
Semantic Scholar
Development of a floating constructed wetland for landfill leachate treatment and its potential to remove recalcitrant organic matter.
Yuka Ogata, Shigeki Yamamura, Nobuyoshi Nakajima, Masato Yamada
2024Water Research7 citations
Semantic Scholar
Unexpected Diversity of pepA Genes Encoding Leucine Aminopeptidases in Sediments from a Freshwater Lake
S. Tsuboi, Shigeki Yamamura, A. Imai, K. Iwasaki
2016Microbes and Environments6 citations Open access
Semantic Scholar
Iodate reduction by marine aerobic bacteria
Ken Kine, Shigeki Yamamura, S. Amachi
2024Frontiers in Microbiology5 citations Open access
Semantic Scholar
Identification of bacterial dissimilatory antimonate reductase AnrA: genes and proteins involved in antimonate respiration and resistance in Geobacter sp. strain SVR
Ryoya Kambara, Shigeki Yamamura, S. Amachi
2024Applied and Environmental Microbiology5 citations Open access
Semantic Scholar
Draft Genome Sequence of a Novel Lactate-Fermenting Bacterial Strain of the Family Sporomusaceae within the Class Negativicutes
Tomo Aoyagi, Y. Kashiwabara, Hibiki Kurasawa, S. Amachi +3 more
2019Microbiology Resource Announcements5 citations Open access
Semantic Scholar
Characterization of arsenate-, selenate- and nitrate-reducing activities in Bacillus sp. SF-1
Shigeki Yamamura, S. Terashi, M. Ike, M. Yamashita +1 more
20045 citations Open access
Semantic Scholar
Draft Genome Sequence of Geobacter sp. Strain SVR, Isolated from Antimony Mine Soil
Tomoro Warashina, Masafumi Harada, N. Nakajima, Shigeki Yamamura +3 more
2020Microbiology Resource Announcements4 citations Open access
Semantic Scholar
Impact of Arsenite on the Bacterial Community Structure and Diversity in Soil
Dian-Tao Dong, Shigeki Yamamura, S. Amachi
2016Microbes and Environments4 citations Open access
Semantic Scholar
Draft Genome Sequence of Arenibacter sp. Strain C-21, an Iodine-Accumulating Bacterium Isolated from Surface Marine Sediment
Kohei Ito, N. Nakajima, Shigeki Yamamura, M. Tomita +2 more
2016Genome Announcements3 citations Open access
Semantic Scholar
Draft Genome Sequence of the Antimony-Oxidizing Pseudomonas sp. Strain SbOxS1, Isolated from Stibnite Mine Tailing Soil
N. Hamamura, N. Nakajima, Shigeki Yamamura
2020Microbiology Resource Announcements2 citations Open access
Semantic Scholar
Vertical variation of bulk and metabolically active prokaryotic community in sediment of a hypereutrophic freshwater lake
S. Tsuboi, A. Kohzu, A. Imai, K. Iwasaki +1 more
2019Environmental science and pollution research international2 citations
Semantic Scholar
Draft Genome Sequence of the Anaerobic Arsenite-Oxidizing Halomonas sp. Strain ANAO-440, Isolated from an Alkaline Saline Lake in Khovsgol, Mongolia
N. Hamamura, N. Damdinsuren, N. Nakajima, Shigeki Yamamura
2021Microbiology Resource Announcements1 citations Open access
Semantic Scholar
Complete Genome Sequence of Geobacter sp. Strain SVR, an Antimonate-Reducing Bacterium Isolated from Antimony-Rich Mine Soil
Tomoro Warashina, Shigeki Yamamura, Haruo Suzuki, S. Amachi +1 more
2021Microbiology Resource Announcements1 citations Open access
Semantic Scholar
Draft Genome Sequence of Cupriavidus sp. Strain IK-TO18, Isolated from Antimony-Contaminated Sediment
Tomotaka Okubo, N. Nakajima, Shigeki Yamamura, N. Hamamura
2021Microbiology Resource Announcements1 citations Open access
Semantic Scholar
Draft Genome Sequence of Roseovarius sp. A-2, an Iodide-Oxidizing Bacterium Isolated from Natural Gas Brine Water, Chiba, Japan
Tri Yuliana, N. Nakajima, Shigeki Yamamura, M. Tomita +2 more
2017Journal of Genomics1 citations Open access
Semantic Scholar
Bromate reduction by Shewanella species depends on both endogenous and exogenous iron
Natsuki Takahashi, Hiroko Fujiya, Haruhiko Sato, Shigeki Yamamura +1 more
2026Frontiers in Microbiology0 citations Open access
Semantic Scholar
Complete genome sequence of Pseudomonas sp. SCT, an iodate-reducing bacterium isolated from marine sediment in Japan
Haruna Kuge, Haruhiko Sato, Shigeki Yamamura, S. Amachi
2025Microbiology Resource Announcements0 citations Open access
Semantic Scholar
Draft genome sequence of Intrasporangium sp. DVR, an actinobacterium of the family Intrasporangiaceae isolated from soil in Japan
S. Amachi, Nobuyoshi Nakajima, Shigeki Yamamura
2024Microbiology Resource Announcements0 citations Open access
Semantic Scholar
Draft genome sequence of Pelosinus sp. IPA-1, a bacterium isolated from arsenic-contaminated soil in Japan
M. Kuroda, Shigeki Yamamura, Nobuyoshi Nakajima, S. Amachi
2023Microbiology Resource Announcements0 citations Open access
Semantic Scholar
Draft Genome Sequence of Stenotrophomonas sp. Strain SbOxS2, an Antimony-Oxidizing Bacterium Isolated from Stibnite Mine Tailing Soil
N. Hamamura, N. Nakajima, Shigeki Yamamura
2020Microbiology Resource Announcements0 citations Open access
Semantic Scholar
Isolation and Characterization of a Dissimilatory Antimonate-Reducing Bacterium
Shigeki Yamamura, S. Amachi
2019Journal of Environmental Conservation Engineering0 citations Open access
Semantic Scholar
Genomic Analysis of Rhodococcus sp. Br-6, a Bromate Reducing Bacterium Isolated From Soil in Chiba, Japan
Kohei Ito, Masafumi Harada, N. Nakajima, Shigeki Yamamura +3 more
2018Journal of Genomics0 citations Open access
Semantic Scholar
Composition and Elution Behavior of Various Elements from Printed Circuit Boards, Cathode-ray Tube Glass, and Liquid-crystal Displays in Waste Consumer Electronics
K. Inaba, T. Murata, Shigeki Yamamura, M. Nagano +3 more
2018Analytical Sciences0 citations Open access
Semantic Scholar
Comparative genomic analysis of the genus Rhodococcus including Rhodococcus equi and its sister group Rhodococcus sp. Br-6, a bromate reducing bacterium isolated from soil in Chiba, Japan.
Kohei Ito, Masafumi Harada, N. Nakajima, Shigeki Yamamura +3 more
20170 citations
Semantic Scholar
Growth rates and tolerance to low water temperatures of freshwater bacterioplankton strains: ecological insights from shallow hypereutrophic lakes in Japan
Keiji Watanabe, Y. Ishii, N. Komatsu, T. Kitamura +4 more
2016Hydrobiologia0 citations
Semantic Scholar
2S-Dp03 Removal of arsenic from contaminated soils by dissimilatory arsenatereducing bacteria and redox mediators
Shigeki Yamamura, S. Amachi, M. Ike
20140 citations
Semantic Scholar
S05-4 Bioremedial potential of microbial arsenic and selenium reduction(Session 5 Geomicrobiology of metal(loid),Symposium session)Symposium session)
Shigeki Yamamura, M. Ike
20120 citations
Semantic Scholar

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S. Amachi×23
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S. Amachi — researcher profile on SciRah
Mirai Watanabe×13
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Mirai Watanabe — researcher profile on SciRah
N. Nakajima×12
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N. Nakajima — researcher profile on SciRah
M. Ike×10
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M. Ike — researcher profile on SciRah

×7

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Haruo Suzuki×7

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Haruo Suzuki — researcher profile on SciRah

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S. Tsuboi — researcher profile on SciRah

Keiji Watanabe×6

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Keiji Watanabe — researcher profile on SciRah

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A. Imai — researcher profile on SciRah

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M. Tomita — researcher profile on SciRah

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M. Fujita — researcher profile on SciRah

M. Koshikawa×5

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M. Koshikawa — researcher profile on SciRah