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T. LaFramboise · SciRah

Researcher profile · Semantic Scholar

T. LaFramboise

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T. LaFramboise — researcher profile on SciRah

h-index: 39
Works: 160
Citations: 8,406

Most-cited papers

Dynamics of clonal evolution in myelodysplastic syndromes
H. Makishima, T. Yoshizato, K. Yoshida, M. Sekeres +33 more
2016Nature Genetics393 citations Open access
Semantic Scholar
Oncogenic PIK3CA mutations reprogram glutamine metabolism in colorectal cancer
Yujun Hao, Yardena Samuels, Qingling Li, Dawid Krokowski +22 more
2016Nature Communications262 citations Open access
Semantic Scholar
Identifying DNA Methylation Biomarkers for Non-Endoscopic Detection of Barrett’s Esophagus
H. Moinova, T. LaFramboise, J. Lutterbaugh, A. Chandar +14 more
2018Science Translational Medicine157 citations Open access
Semantic Scholar
Adaptation to chronic ER stress enforces pancreatic β-cell plasticity
Chien-Wen Chen, Bo-Jhih Guan, Mohammed R. Alzahrani, Zhaofeng Gao +18 more
2022Nature Communications108 citations Open access
Semantic Scholar
Genomic determinants of chronic myelomonocytic leukemia
B. Patel, B. Przychodzen, S. Thota, T. Radivoyevitch +17 more
2017Leukemia106 citations Open access
Semantic Scholar
Selected mitochondrial DNA landscapes activate the SIRT3 axis of the UPRmt to promote metastasis
Timothy C. Kenny, Peter C. Hart, M. Ragazzi, Madhavika Sersinghe +12 more
2017Oncogene89 citations Open access
Semantic Scholar
Single cell RNA sequencing of AML initiating cells reveals RNA-based evolution during disease progression
L. Stetson, D. Balasubramanian, S. Ribeiro, Tammy Stefan +18 more
2021Leukemia75 citations Open access
Semantic Scholar
Heteroplasmic shifts in tumor mitochondrial genomes reveal tissue-specific signals of relaxed and positive selection
S. Grandhi, Colleen M. Bosworth, W. Maddox, Cole Sensiba +3 more
2017Human Molecular Genetics69 citations Open access
Semantic Scholar
Consequences of mutant TET2 on clonality and subclonal hierarchy
C. Hirsch, A. Nazha, Kassy E Kneen, M. Abazeed +17 more
2018Leukemia58 citations Open access
Semantic Scholar
Invariant patterns of clonal succession determine specific clinical features of myelodysplastic syndromes
Y. Nagata, H. Makishima, C. Kerr, B. Przychodzen +20 more
2019Nature Communications57 citations Open access
Semantic Scholar
Germline loss-of-function SAMD9 and SAMD9L alterations in adult myelodysplastic syndromes.
Y. Nagata, S. Narumi, Yihong Guan, B. Przychodzen +20 more
2018Blood53 citations Open access
Semantic Scholar
Phase I/II study of azacitidine and capecitabine/oxaliplatin (CAPOX) in refractory CIMP-high metastatic colorectal cancer: evaluation of circulating methylated vimentin
M. Overman, V. Morris, H. Moinova, G. Manyam +15 more
2016OncoTarget50 citations Open access
Semantic Scholar
Recurrent genetic defects on chromosome 5q in myeloid neoplasms
N. Hosono, H. Makishima, R. Mahfouz, B. Przychodzen +19 more
2016OncoTarget48 citations Open access
Semantic Scholar
Visually Meaningful Histopathological Features for Automatic Grading of Prostate Cancer
M. K. Niazi, Keluo Yao, Debra L. Zynger, S. Clinton +4 more
2017IEEE journal of biomedical and health informatics46 citations
Semantic Scholar
The DNMT1-associated lincRNA DACOR1 reprograms genome-wide DNA methylation in colon cancer
Saigopal Somasundaram, M. E. Forrest, H. Moinova, A. Cohen +4 more
2018Clinical Epigenetics44 citations Open access
Semantic Scholar
Colon Cancer-Upregulated Long Non-Coding RNA lincDUSP Regulates Cell Cycle Genes and Potentiates Resistance to Apoptosis
M. E. Forrest, Alina R. Saiakhova, Lydia Beard, David A. Buchner +4 more
2018Scientific Reports43 citations Open access
Semantic Scholar
Circulating microbial content in myeloid malignancy patients is associated with disease subtypes and patient outcomes
J. Woerner, Yi-Di Huang, S. Hutter, C. Gurnari +13 more
2022Nature Communications38 citations Open access
Semantic Scholar
The Similarity of Class II HLA Genotypes Defines Patterns of Autoreactivity in Idiopathic Bone Marrow Failure Disorders.
S. Pagliuca, C. Gurnari, H. Awada, Ashwin Kishtagari +17 more
2021Blood38 citations
Semantic Scholar
PCR-Free Enrichment of Mitochondrial DNA from Human Blood and Cell Lines for High Quality Next-Generation DNA Sequencing
Meetha P. Gould, Colleen M. Bosworth, S. Mcmahon, S. Grandhi +2 more
2015PLoS ONE38 citations Open access
Semantic Scholar
Unexpected cancer-predisposition gene variants in Cowden syndrome and Bannayan-Riley-Ruvalcaba syndrome patients without underlying germline PTEN mutations
L. Yehia, Y. Ni, Kaitlin Sesock, Farshad Niazi +4 more
2018PLoS Genetics32 citations Open access
Semantic Scholar
Cisplatin-mediated upregulation of APE2 binding to MYH9 provokes mitochondrial fragmentation and acute kidney injury
Yi Hu, Chun Yang, Tânia Amorim, M. Maqbool +24 more
2020Cancer Research30 citations Open access
Semantic Scholar
Detection and quantification of mitochondrial DNA deletions from next-generation sequence data
Colleen M. Bosworth, S. Grandhi, Meetha P. Gould, T. LaFramboise
2017BMC Bioinformatics28 citations Open access
Semantic Scholar
Genome-wide protein–DNA interaction site mapping in bacteria using a double-stranded DNA-specific cytosine deaminase
Larry A. Gallagher, Elena Velázquez, S. Peterson, James C. Charity +17 more
2022Nature Microbiology26 citations Open access
Semantic Scholar
Mitochondrial DNA Content Is Linked to Cardiovascular Disease Patient Phenotypes
Ruipeng Wei, Y. Ni, P. Bazeley, S. Grandhi +5 more
2021Journal of the American Heart Association : Cardiovascular and Cerebrovascular Disease26 citations Open access
Semantic Scholar
Clinical and basic implications of dynamic T cell receptor clonotyping in hematopoietic cell transplantation
S. Pagliuca, C. Gurnari, Sanghee Hong, Ran Zhao +15 more
2021JCI Insight26 citations Open access
Semantic Scholar
Molecular features of early onset adult myelodysplastic syndrome
C. Hirsch, B. Przychodzen, T. Radivoyevitch, B. Patel +9 more
2017Haematologica25 citations Open access
Semantic Scholar
Germline compound heterozygous poly-glutamine deletion in USF3 may be involved in predisposition to heritable and sporadic epithelial thyroid carcinoma
Y. Ni, S. Seballos, Benjamin Fletcher, T. Romigh +8 more
2016Human Molecular Genetics24 citations Open access
Semantic Scholar
Eltrombopag inhibits TET dioxygenase to contribute to hematopoietic stem cell expansion in aplastic anemia
Yihong Guan, M. Hasipek, Dongxu Jiang, A. Tiwari +13 more
2022Journal of Clinical Investigation23 citations Open access
Semantic Scholar
Genomics of deletion 7 and 7q in myeloid neoplasm: from pathogenic culprits to potential synthetic lethal therapeutic targets
Minako Mori, Y. Kubota, Arda Durmaz, C. Gurnari +13 more
2023Leukemia22 citations Open access
Semantic Scholar
Significance of hereditary gene alterations for the pathogenesis of adult bone marrow failure versus myeloid neoplasia
Y. Kubota, M. Zawit, J. Durrani, Wen-Yi Shen +13 more
2022Leukemia18 citations
Semantic Scholar
Novel DNA Methylation Biomarker Panel for Detection of Esophageal Adenocarcinoma and High-grade Dysplasia
Ming Yu, H. Moinova, A. Willbanks, Victoria K. Cannon +16 more
2022Clinical Cancer Research17 citations Open access
Semantic Scholar
Pathophysiologic and clinical implications of molecular profiles resultant from deletion 5q
V. Adema, Laura Palomo, W. Walter, M. Mallo +16 more
2022EBioMedicine16 citations Open access
Semantic Scholar
The Ephrin B2 Receptor Tyrosine Kinase Is a Regulator of Proto-oncogene MYC and Molecular Programs Central to Barrett’s Neoplasia
S. Venkitachalam, D. Babu, D. Ravillah, Ramachandra Katabathula +15 more
2022Gastroenterology15 citations Open access
Semantic Scholar
Impact of germline CTC1 alterations on telomere length in acquired bone marrow failure
Wen-Yi Shen, C. Kerr, B. Przychozen, R. Mahfouz +7 more
2019British Journal of Haematology14 citations Open access
Semantic Scholar
A cloud-based resource for genome coordinate-based exploration and large-scale analysis of chromosome aberrations and gene fusions in cancer
Janet Wang, Jeanne Zheng, Elaine E Lee, Boris Aguilar +9 more
2023Genes, Chromosomes and Cancer13 citations Open access
Semantic Scholar
CytoConverter: a web-based tool to convert karyotypes to genomic coordinates
Janet Wang, T. LaFramboise
2019BMC Bioinformatics12 citations Open access
Semantic Scholar
Rare germline variant contributions to myeloid malignancy susceptibility
Samuel T. Li,, Janet Wang, Ruipeng Wei, Ruqi Shi +8 more
2020Leukemia11 citations Open access
Semantic Scholar
Whole-exome sequencing enhances prognostic classification of myeloid malignancies
Matthew Ruffalo, Holleh D. Husseinzadeh, H. Makishima, B. Przychodzen +4 more
2015Journal of Biomedical Informatics10 citations Open access
Semantic Scholar
Evaluating the Bioenergetics Health Index Ratio in Leigh Syndrome Fibroblasts to Understand Disease Severity
Ajibola B. Bakare, Joseph Dean, Qun Chen, Vedant Thorat +4 more
2021International Journal of Molecular Sciences9 citations Open access
Semantic Scholar
Myeloid neoplasms with germline predisposition: Practical considerations and complications in the search for new susceptibility loci.
H. Carraway, T. LaFramboise
2020Baillière's Best Practice & Research: Clinical Haematology8 citations
Semantic Scholar
Rare germline alterations of myeloperoxidase predispose to myeloid neoplasms
S. Kongkiatkamon, L. Terkawi, Yihong Guan, V. Adema +17 more
2022Leukemia5 citations
Semantic Scholar
The applications of massive parallel sequencing (next-generation sequencing) in research and molecular diagnosis of human genetic diseases
Hieu T. Nguyen, H. Le, L. Nguyen, H. Lou +1 more
2018Vietnam Journal of Science Technology and Engineering5 citations Open access
Semantic Scholar
Determining telomere content and genomics of myeloid neoplasia by whole-genome sequencing.
L. Guarnera, A. Wahida, C. Gurnari, S. Hutter +18 more
2025Blood3 citations Open access
Semantic Scholar
Genetics of Monosomy 7 and Del(7q) in MDS Informs Potential Therapeutic Targets
C. Kerr, V. Adema, W. Walter, S. Hutter +9 more
2019Blood3 citations Open access
Semantic Scholar
Molecular Spectrum of CSF3R variants Correlate with Specific Myeloid Malignancies and Secondary Mutations
V. Adema, C. Hirsch, B. Przychodzen, Y. Nagata +15 more
2018Blood3 citations
Semantic Scholar
Germline SAMD9 and SAMD9L Alterations in Adult Myelodysplastic Syndromes
Y. Nagata, B. Przychodzen, C. Hirsch, H. Makishima +15 more
20173 citations
Semantic Scholar
Pathogenic Relevance of Germ Line TET2 Alterations
C. Hirsch, A. Nazha, Kassy E Kneen, M. Meggendorfer +8 more
20163 citations
Semantic Scholar
Mutant TP53 prevents Telomere Shortening in Acute Myeloid Leukemia
A. Wahida, S. Hutter, C. Gurnari, S. Stainczyk +9 more
2021Blood2 citations
Semantic Scholar
Deficiency of RPS14 Beyond the Haploinsufficient Loss in Del(5q)
V. Adema, S. Kongkiatkamon, Laura Palomo, W. Walter +13 more
2021Blood2 citations Open access
Semantic Scholar
SYS-Mut: Decoding the Functional Significance of Rare Somatic Mutations in Cancer
S. Khalighi, P. Joseph, D. Babu, Salendra Singh +3 more
2021bioRxiv2 citations Open access
Semantic Scholar

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