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J. Cullum · SciRah

Researcher profile · Semantic Scholar

J. Cullum

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J. Cullum — researcher profile on SciRah

h-index: 27
Works: 133
Citations: 3,165

Most-cited papers

A set of ordered cosmids and a detailed genetic and physical map for the 8 Mb Streptomyces coelicolor A3(2) chromosome
M. Redenbach, H. Kieser, D. Denapaite, A. Eichner +3 more
1996Molecular Microbiology584 citations
Semantic Scholar
ClustScan: an integrated program package for the semi-automatic annotation of modular biosynthetic gene clusters and in silico prediction of novel chemical structures
A. Starčević, J. Žučko, Jurica Simunkovic, Paul F. Long +2 more
2008Nucleic Acids Research211 citations Open access
Semantic Scholar
Enzymes of the shikimic acid pathway encoded in the genome of a basal metazoan, Nematostella vectensis, have microbial origins
A. Starčević, S. Akthar, W. Dunlap, J. Shick +3 more
2008Proceedings of the National Academy of Sciences of the United States of America128 citations Open access
Semantic Scholar
Hexachlorocyclohexane-degrading bacterial strains Sphingomonas paucimobilis B90A, UT26 and Sp+, having similar lin genes, represent three distinct species, Sphingobium indicum sp. nov., Sphingobium japonicum sp. nov. and Sphingobium francense sp. nov., and reclassification of [Sphingomonas] chungbuk
Rinku Pal, S. Bala, Mandeep Dadhwal, Mukesh Kumar +7 more
2005International Journal of Systematic and Evolutionary Microbiology110 citations Open access
Semantic Scholar
Genetics of Streptomyces rimosus, the Oxytetracycline Producer
H. Petković, J. Cullum, D. Hranueli, I. Hunter +5 more
2006Microbiology and Molecular Biology Reviews105 citations Open access
Semantic Scholar
Recombination between the linear plasmid pPZG101 and the linear chromosome of Streptomyces rimosus can lead to exchange of ends
S. Pandža, G. Biuković, A. Paravić, A. Dadbin +2 more
1998Molecular Microbiology77 citations Open access
Semantic Scholar
Reclassification of Amycolatopsis mediterranei DSM 46095 as Amycolatopsis rifamycinica sp. nov.
S. Bala, Richie Khanna, Mandeep Dadhwal, S. R. Prabagaran +3 more
2004International Journal of Systematic and Evolutionary Microbiology66 citations Open access
Semantic Scholar
Physical mapping shows that the unstable oxytetracycline gene cluster of Streptomyces rimosus lies close to one end of the linear chromosome.
K. Pandža, Guido Pfalzer, J. Cullum, D. Hranueli
1997Microbiology65 citations Open access
Semantic Scholar
KEGG orthology-based annotation of the predicted proteome of Acropora digitifera: ZoophyteBase - an open access and searchable database of a coral genome
W. Dunlap, A. Starčević, Damir Baranasic, Janko Diminić +6 more
2013BMC Genomics60 citations Open access
Semantic Scholar
Polyketide synthase genes and the natural products potential of Dictyostelium discoideum
J. Žučko, N. Skunca, Tomaž Curk, B. Zupan +4 more
2007Bioinform.53 citations Open access
Semantic Scholar
Plasticity of the streptomyces genome-evolution and engineering of new antibiotics.
D. Hranueli, J. Cullum, B. Basrak, Pavle Goldstein +1 more
2005Current Medicinal Chemistry46 citations
Semantic Scholar
Bacterial diversity of polluted surface sediments in the northern Adriatic Sea.
M. Korlević, J. Žučko, Mirjana Najdek Dragić, Maria Blažina +10 more
2015Systematic and Applied Microbiology43 citations
Semantic Scholar
Draft Genome Sequence of Streptomyces rapamycinicus Strain NRRL 5491, the Producer of the Immunosuppressant Rapamycin
Damir Baranasic, R. Gaćeša, A. Starčević, J. Žučko +8 more
2013Genome Announcements41 citations Open access
Semantic Scholar
Predicting substrate specificity of adenylation domains of nonribosomal peptide synthetases and other protein properties by latent semantic indexing
Damir Baranasic, J. Žučko, Janko Diminić, R. Gaćeša +4 more
2013Journal of Industrial Microbiology & Biotechnology41 citations Open access
Semantic Scholar
DNA amplification and an unstable arginine gene in Streptomyces lividans 66
J. Altenbuchner, J. Cullum
2004Molecular and General Genetics MGG40 citations
Semantic Scholar
Global genome analysis of the shikimic acid pathway reveals greater gene loss in host-associated than in free-living bacteria
Jurica Zucko, W. Dunlap, J. Shick, J. Cullum +7 more
2010BMC Genomics35 citations Open access
Semantic Scholar
Gene Expression in the Scleractinian Acropora microphthalma Exposed to High Solar Irradiance Reveals Elements of Photoprotection and Coral Bleaching
A. Starčević, Walter C. Dunlap, J. Cullum, J. Shick +2 more
2010PLoS ONE34 citations Open access
Semantic Scholar
Analysis of a comprehensive dataset of diversity generating retroelements generated by the program DiGReF
T. Schillinger, Mohamed Lisfi, J. Chi, J. Cullum +1 more
2012BMC Genomics27 citations Open access
Semantic Scholar
Pharmacokinetic of ALA and h-ALA induced porphyrins in the models Mycobacterium phlei and Mycobacterium smegmatis.
R. Bruce-Micah, D. Hüttenberger, Lutz Freitag, J. Cullum +1 more
2009Journal of Photochemistry and Photobiology. B: Biology24 citations
Semantic Scholar
A cold-active esterase of Streptomyces coelicolor A3(2): from genome sequence to enzyme activity
S. Soror, V. Verma, R. Rao, S. Rasool +3 more
2007Journal of Industrial Microbiology & Biotechnology24 citations
Semantic Scholar
Databases of the thiotemplate modular systems (CSDB) and their in silico recombinants (r-CSDB)
Janko Diminić, J. Žučko, Ida Trninic Ruzic, R. Gaćeša +4 more
2013Journal of Industrial Microbiology & Biotechnology22 citations Open access
Semantic Scholar
Genetic instability in Streptomyces
Dharmalingam, J. Cullum
200622 citations
Semantic Scholar
Structure of an amplifiable DNA sequence in Streptomyces lividans 66
J. Altenbuchner, J. Cullum
2004Molecular and General Genetics MGG21 citations
Semantic Scholar
Molecular biology of polyketide biosynthesis
D. Hranueli, N. Perić, Branko Borovička, S. Bogdan +3 more
200221 citations
Semantic Scholar
Evolutionary concepts in natural products discovery: what actinomycetes have taught us
Janko Diminić, A. Starčević, Mohamed Lisfi, Damir Baranasic +5 more
2013Journal of Industrial Microbiology & Biotechnology18 citations Open access
Semantic Scholar
Annotation of the Modular Polyketide Synthase and Nonribosomal Peptide Synthetase Gene Clusters in the Genome of Streptomyces tsukubaensis NRRL18488
M. Blazic, A. Starčević, Mohamed Lisfi, Damir Baranasic +8 more
2012Applied and Environmental Microbiology18 citations Open access
Semantic Scholar
Predicting the Nature and Timing of Epimerisation on a Modular Polyketide Synthase
A. Starčević, M. Jaspars, J. Cullum, D. Hranueli +1 more
2007ChemBioChem18 citations
Semantic Scholar
DNA amplifications and deletions in Streptomyces lividans 66 and the loss of one end of the linear chromosome
Uwe Rauland, Ingrun Glocker, M. Redenbach, J. Cullum
1995Molecular and General Genetics MGG18 citations
Semantic Scholar
Mining the genome sequence for novel enzyme activity: characterisation of an unusual member of the hormone-sensitive lipase family of esterases from the genome of Streptomyces coelicolor A3 (2).
S. Soror, R. Rao, J. Cullum
2009Protein engineering, design & selection : PEDS17 citations
Semantic Scholar
Development of cloning vectors and transformation methods for Amycolatopsis
G. Dhingra, R. Kumari, S. Bala, S. Majumdar +5 more
2003Journal of Industrial Microbiology & Biotechnology16 citations Open access
Semantic Scholar
Genomic Characterization of Variable Surface Antigens Reveals a Telomere Position Effect as a Prerequisite for RNA Interference-Mediated Silencing in Paramecium tetraurelia
Damir Baranasic, Timothy Oppermann, Miriam Cheaib, J. Cullum +2 more
2014mBio15 citations Open access
Semantic Scholar
Recombinatorial biosynthesis of polyketides
A. Starčević, K. Wolf, Janko Diminić, J. Žučko +4 more
2011Journal of Industrial Microbiology & Biotechnology15 citations Open access
Semantic Scholar
Evolutionary dynamics of modular polyketide synthases, with implications for protein design and engineering
J. Žučko, J. Cullum, D. Hranueli, P. Long
2011Journal of antibiotics (Tokyo. 1968)14 citations
Semantic Scholar
A novel docking domain interface model predicting recombination between homoeologous modular biosynthetic gene clusters
A. Starčević, Janko Diminić, J. Žučko, Mouhsine Elbekali +6 more
2010Journal of Industrial Microbiology & Biotechnology14 citations Open access
Semantic Scholar
Animal virus genetics
D. Ghosal, H. Sommer, J. Cullum, P. Peterson +1 more
2004Journal of Supramolecular Structure14 citations Open access
Semantic Scholar
GENETIC VARIABILITY AND AGGRESSIVENESS IN CURVULARIA LUNATA ASSOCIATED WITH RICE-WHEAT CROPPING AREAS OF PAKISTAN
I. Ahmad, S. Iram, J. Cullum
200613 citations
Semantic Scholar
Proposed arrangement of proteins forming a bacterial type II polyketide synthase.
G. Castaldo, J. Žučko, S. Heidelberger, Dušica Vujaklija +6 more
2008Chemistry and Biology11 citations Open access
Semantic Scholar
Bioprospecting for Genes Encoding Hydrocarbon-Degrading Enzymes from Metagenomic Samples Isolated from Northern Adriatic Sea Sediments.
R. Gacesa, Damir Baranasic, A. Starčević, Janko Diminić +10 more
2018Food Technology and Biotechnology10 citations Open access
Semantic Scholar
Combinations of long peptide sequence blocks can be used to describe toxin diversification in venomous animals.
A. Starčević, A. Moura-da-Silva, J. Cullum, D. Hranueli +1 more
2015Toxicon10 citations
Semantic Scholar
Genetic heterogeneity among keto-acid-producing strains of Gluconobacter oxydans
V. Verma, P. Qazi, J. Cullum, G. Qazi
199710 citations
Semantic Scholar
Structural Instability of the Streptomyces lividans 66 Chromosome and Related Effects
M. Redenbach, A. Arnold, Uwe Rauland, J. Cullum
199410 citations Open access
Semantic Scholar
Integration of IS3 into IS2 generates a short sequence duplication
H. Sommer, J. Cullum, H. Saedler
2004Molecular and General Genetics MGG9 citations
Semantic Scholar
Pathogenicity and relative virulence of 11 Greek Phytophthora species on apple and pear rootstocks
T. Thomidis, C. Tsipouridis, J. Cullum
20029 citations Open access
Semantic Scholar
High G + C-content DNA markers for pulsed-field gel electrophoresis.
B. Gravius, J. Cullum, Daslav Hranueli
1994BioTechniques9 citations
Semantic Scholar
From DNA sequences to chemical structures – methods for mining microbial genomic and metagenomic data sets for new natural products
J. Žučko, A. Starčević, Janko Diminić, Mouhsine Elbekali +4 more
20108 citations
Semantic Scholar
Persistence of the Chromosome End Regions at Low Copy Number in Mutant Strains of Streptomyces rimosus and Streptomyces lividans
D. Denapaite, Andrea Paravić Radičević, Branka Čajavec, I. Hunter +2 more
20058 citations
Semantic Scholar
Improved method for the isolation and visualization of terminal protein-bound DNA fragments in actinomycetes.
A. Stoll, J. Cullum
2000BioTechniques8 citations
Semantic Scholar
A Complex Insertion Sequence Cluster at a Point of Interaction between the Linear Plasmid SCP1 and the Linear Chromosome of Streptomyces coelicolor A3(2)
M. Yamasaki, K. Miyashita, J. Cullum, H. Kinashi
2000Journal of Bacteriology8 citations Open access
Semantic Scholar
2-epi-5-epi-Valiolone synthase activity is essential for maintaining phycobilisome composition in the cyanobacterium Anabaena variabilis ATCC 29413 when grown in the presence of a carbon source
Edward M. Spence, Samantha J. Bryan, Mohamed Lisfi, J. Cullum +4 more
2013Photosynthesis Research7 citations
Semantic Scholar
Clustering of protein domains for functional and evolutionary studies
Pavle Goldstein, J. Žučko, Dušica Vujaklija, A. Kriško +5 more
2009BMC Bioinformatics7 citations Open access
Semantic Scholar

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