Ramesh Rajaby

Most-cited papers

1. INSurVeyor: improving insertion calling from short read sequencing data

   Ramesh Rajaby, Dongxu Liu, Chun-Hang Au, Y. Cheung +3 more

   2023Nature Communications31 citations Open access

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2. SurVirus: a repeat-aware virus integration caller

   Ramesh Rajaby, Yi Zhou, Yifan Meng, Xi Zeng +3 more

   2021Nucleic Acids Research29 citations Open access

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3. Calling large indels in 1047 Arabidopsis with IndelEnsembler

   Dongxu Liu, Ramesh Rajaby, Lu Wei, Lei Zhang +3 more

   2021Nucleic Acids Research19 citations Open access

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4. TranSurVeyor: an improved database-free algorithm for finding non-reference transpositions in high-throughput sequencing data

   Ramesh Rajaby, Wing-Kin Sung

   2018Nucleic Acids Research16 citations Open access

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5. Constructing telomere-to-telomere diploid genome by polishing haploid nanopore-based assembly

   Joshua Casey Darian, Ritu Kundu, Ramesh Rajaby, Wing-Kin Sung

   2024Nature Methods12 citations

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6. SurVIndel: improving CNV calling from high-throughput sequencing data through statistical testing

   Ramesh Rajaby, Wing-Kin Sung

   2019Bioinform.11 citations

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7. Algorithms for the Majority Rule (+) Consensus Tree and the Frequency Difference Consensus Tree

   J. Jansson, Ramesh Rajaby, Chuanqi Shen, Wing-Kin Sung

   2013IEEE/ACM Transactions on Computational Biology & Bioinformatics10 citations Open access

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8. A Catalogue of Structural Variation across Ancestrally Diverse Asian Genomes

   J. Tan, Zhi-Hui Li, M. Porta, Ramesh Rajaby +61 more

   2024Nature Communications8 citations Open access

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9. A More Practical Algorithm for the Rooted Triplet Distance

   J. Jansson, Ramesh Rajaby

   2015International Conference on Algorithms for Computational Biology7 citations

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10. SurVIndel2: improving copy number variant calling from next-generation sequencing using hidden split reads

    Ramesh Rajaby, Wing-Kin Sung

    2024Nature Communications6 citations Open access

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11. UniVar: A variant interpretation platform enhancing rare disease diagnosis through robust filtering and unified analysis of SNV, INDEL, CNV and SV

    C. C. Au-Yeung, Yuen-Ting Cheung, Joshua Cheng, Ken W. H. Ip +15 more

    2024Comput. Biol. Medicine5 citations Open access

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12. Computing Asymmetric Median Tree of Two Trees via Better Bipartite Matching Algorithm

    Ramesh Rajaby, Wing-Kin Sung

    2017International Workshop on Combinatorial Algorithms4 citations

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13. An Efficient Algorithm for the Rooted Triplet Distance Between Galled Trees

    J. Jansson, Ramesh Rajaby, Wing-Kin Sung

    2019International Conference on Algorithms for Computational Biology3 citations Open access

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14. Computing the Rooted Triplet Distance Between Phylogenetic Networks

    J. Jansson, Konstantinos Mampentzidis, Ramesh Rajaby, Wing-Kin Sung

    2019Algorithmica3 citations Open access

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15. Determining the Consistency of Resolved Triplets and Fan Triplets

    J. Jansson, A. Lingas, Ramesh Rajaby, Wing-Kin Sung

    2017Annual International Conference on Research in Computational Molecular Biology2 citations Open access

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16. SurVIndel2: improving local CNVs calling from next-generation sequencing using novel hidden information

    Ramesh Rajaby, Wing-Kin Sung

    20231 citations

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17. SurVIndel2: improving CNVs calling from next-generation sequencing using novel hidden information

    Ramesh Rajaby, Wing-Kin Sung

    2023bioRxiv0 citations Open access

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