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T. Burkard · SciRah

Researcher profile · Semantic Scholar

T. Burkard

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T. Burkard — researcher profile on SciRah

h-index: 29
Works: 61
Citations: 4,953

Most-cited papers

Guided self-organization and cortical plate formation in human brain organoids
Madeline A. Lancaster, Nina S. Corsini, Simone Wolfinger, E. Gustafson +5 more
2017Nature Biotechnology727 citations Open access
Semantic Scholar
Thiol-linked alkylation of RNA to assess expression dynamics
V. Herzog, Brian Reichholf, Tobias Neumann, Philipp Rescheneder +6 more
2017Nature Methods578 citations Open access
Semantic Scholar
IFIT1 is an antiviral protein that recognizes 5′-triphosphate RNA
A. Pichlmair, C. Lassnig, Carol-Ann Eberle, M. Górna +11 more
2011Nature Immunology498 citations Open access
Semantic Scholar
Self-Renewing Trophoblast Organoids Recapitulate the Developmental Program of the Early Human Placenta
S. Haider, G. Meinhardt, Leila Saleh, V. Kunihs +9 more
2018Stem Cell Reports385 citations Open access
Semantic Scholar
Genetically engineered cerebral organoids model brain tumour formation
Shan Bian, M. Repic, Zhenming Guo, A. Kavirayani +4 more
2018Nature Methods364 citations Open access
Semantic Scholar
Single-cell brain organoid screening identifies developmental defects in autism
Chong Li, J. Fleck, Catarina Martins-Costa, T. Burkard +11 more
2022bioRxiv249 citations Open access
Semantic Scholar
Ecdysone and mediator change energy metabolism to terminate proliferation in Drosophila neural stem cells.
Catarina C. F. Homem, Victoria Steinmann, T. Burkard, A. Jais +2 more
2014Cell220 citations Open access
Semantic Scholar
SWI/SNF complex prevents lineage reversion and induces temporal patterning in neural stem cells.
E. Eroglu, T. Burkard, Yanrui Jiang, Nidhi Saini +3 more
2014Cell140 citations Open access
Semantic Scholar
FACS Purification and Transcriptome Analysis of Drosophila Neural Stem Cells Reveals a Role for Klumpfuss in Self-Renewal
C. Berger, H. Harzer, T. Burkard, Jonas Steinmann +5 more
2012Cell Reports138 citations Open access
Semantic Scholar
Organoid modeling of Zika and Herpes Simplex virus 1 infections reveals virus-specific responses leading to microcephaly
Veronica Krenn, Camilla Bosone, T. Burkard, Julia Spanier +7 more
2021Cell Stem Cell130 citations Open access
Semantic Scholar
Multilayered VBC score predicts sgRNAs that efficiently generate loss-of-function alleles
Georg Michlits, J. Jude, Matthias Hinterndorfer, M. de Almeida +10 more
2020Nature Methods118 citations
Semantic Scholar
CRISPR-UMI: single-cell lineage tracing of pooled CRISPR–Cas9 screens
Georg Michlits, M. Hubmann, S. Wu, Gintautas Vainorius +11 more
2017Nature Methods114 citations
Semantic Scholar
Oestrogen signalling drives ciliogenesis in human endometrial organoids.
S. Haider, Magdalena Gamperl, T. Burkard, Viktoria Kunihs +7 more
2019Endocrinology90 citations Open access
Semantic Scholar
Isolating live cell clones from barcoded populations using CRISPRa-inducible reporters
Christian Umkehrer, Felix Holstein, Laura Formenti, J. Jude +10 more
2020Nature Biotechnology88 citations Open access
Semantic Scholar
Molecular processes during fat cell development revealed by gene expression profiling and functional annotation
H. Hackl, T. Burkard, Alexander Sturn, Renee Rubio +5 more
2005Genome Biology79 citations Open access
Semantic Scholar
Uridylation of RNA Hairpins by Tailor Confines the Emergence of MicroRNAs in Drosophila
Madalena M. Reimão-Pinto, V. Ignatova, T. Burkard, Jui-Hung Hung +6 more
2015Molecules and Cells75 citations Open access
Semantic Scholar
Coordinated Control of mRNA and rRNA Processing Controls Embryonic Stem Cell Pluripotency and Differentiation.
Nina S. Corsini, A. Peer, Paul Moeseneder, Mykola Roiuk +4 more
2018Cell Stem Cell74 citations Open access
Semantic Scholar
Cell-type specific sequencing of microRNAs from complex animal tissues
Chiara Alberti, Raphael A Manzenreither, I. Sowemimo, T. Burkard +4 more
2018Nature Methods74 citations Open access
Semantic Scholar
Initial characterization of the human central proteome
T. Burkard, Melanie Planyavsky, I. Kaupe, F. Breitwieser +4 more
2011BMC Systems Biology70 citations Open access
Semantic Scholar
A reversible haploid murine embryonic stem cell biobank resource for functional genomics
U. Elling, Reiner A. Wimmer, A. Leibbrandt, Julien Marquis +31 more
2017Nature66 citations Open access
Semantic Scholar
Parallel PRC2/cPRC1 and vPRC1 pathways silence lineage-specific genes and maintain self-renewal in mouse embryonic stem cells
J. A. Zepeda-Martínez, C. Pribitzer, J. Wang, D. Bsteh +9 more
2020Science Advances60 citations Open access
Semantic Scholar
Molecular basis for cytoplasmic RNA surveillance by uridylation-triggered decay in Drosophila
Madalena M. Reimão-Pinto, Raphael A Manzenreither, T. Burkard, P. Śledź +3 more
2016EMBO Journal55 citations Open access
Semantic Scholar
Extracellular Purine Metabolism Is the Switchboard of Immunosuppressive Macrophages and a Novel Target to Treat Diseases With Macrophage Imbalances
A. Ohradanova-Repic, C. Machacek, C. Charvet, F. Lager +17 more
2018Frontiers in Immunology53 citations Open access
Semantic Scholar
The tumor suppressor Brat controls neuronal stem cell lineages by inhibiting Deadpan and Zelda
I. Reichardt, F. Bonnay, Victoria Steinmann, I. Loedige +3 more
2017EMBO Reports51 citations Open access
Semantic Scholar
MASPECTRAS: a platform for management and analysis of proteomics LC-MS/MS data
J. Hartler, G. Thallinger, Gernot Stocker, Alexander Sturn +6 more
2007BMC Bioinformatics50 citations Open access
Semantic Scholar
Differential transcriptional modulation of biological processes in adipocyte triglyceride lipase and hormone-sensitive lipase-deficient mice.
Montserrat Pinent, H. Hackl, T. Burkard, A. Prokesch +6 more
2008Genomics43 citations Open access
Semantic Scholar
Genetically engineered cerebral organoids model brain tumor formation
Shan Bian, M. Repic, Zhenming Guo, A. Kavirayani +4 more
2018Nature Methods37 citations Open access
Semantic Scholar
The asymmetrically segregating lncRNA cherub is required for transforming stem cells into malignant cells
Lisa Landskron, Victoria Steinmann, F. Bonnay, T. Burkard +6 more
2018eLife36 citations Open access
Semantic Scholar
The chemokine interleukin‐8 and the surface activation protein CD69 are markers for Bcr–Abl activity in chronic myeloid leukemia
O. Hantschel, Agnes Gstoettenbauer, J. Colinge, I. Kaupe +4 more
2008Molecular Oncology36 citations Open access
Semantic Scholar
The transcription factor odd-paired regulates temporal identity in transit-amplifying neural progenitors via an incoherent feed-forward loop
M. D. Abdusselamoglu, E. Eroglu, T. Burkard, Juergen A. Knoblich
2019bioRxiv34 citations Open access
Semantic Scholar
Low-density lipoprotein receptor–related protein 1 (LRP1) as an auxiliary host factor for RNA viruses
S. Devignot, Tim Wai Sha, T. Burkard, Patrick Schmerer +5 more
2023Life Science Alliance28 citations Open access
Semantic Scholar
A Computational Approach to Analyze the Mechanism of Action of the Kinase Inhibitor Bafetinib
T. Burkard, U. Rix, F. Breitwieser, G. Superti-Furga +1 more
2010PLoS Comput. Biol.28 citations Open access
Semantic Scholar
A polarized FGF8 source specifies frontotemporal signatures in spatially oriented cell populations of cortical assembloids
Camilla Bosone, D. Castaldi, T. Burkard, Segundo Jose Guzman +11 more
2024Nature Methods25 citations Open access
Semantic Scholar
Time-resolved transcriptomics in neural stem cells identifies a v-ATPase/Notch regulatory loop
Sebastian Wissel, H. Harzer, F. Bonnay, T. Burkard +2 more
2018Journal of Cell Biology24 citations Open access
Semantic Scholar
The splicing co-factor Barricade/Tat-SF1 is required for cell cycle and lineage progression in Drosophila neural stem cells
Monika K. Abramczuk, T. Burkard, V. Rolland, Victoria Steinmann +5 more
2017Development18 citations Open access
Semantic Scholar
A Target-Disease Network Model of Second-Generation BCR-ABL Inhibitor Action in Ph+ ALL
U. Rix, J. Colinge, K. Blatt, M. Gridling +9 more
2013PLoS ONE16 citations Open access
Semantic Scholar
Multilayered VBC score predicts sgRNAs that efficiently generate loss-of-function alleles
Georg Michlits, J. Jude, Matthias Hinterndorfer, M. de Almeida +10 more
2020Nature Methods13 citations
Semantic Scholar
Guided self-organization recapitulates tissue architecture in a bioengineered brain organoid model
Madeline A. Lancaster, Nina S. Corsini, T. Burkard, Juergen A. Knoblich
2016bioRxiv12 citations Open access
Semantic Scholar
Rapid nucleus-scale reorganization of chromatin in neurons enables transcriptional adaptation for memory consolidation
Manuel Peter, D. Aschauer, Renata Rose, A. Sinning +7 more
2020bioRxiv11 citations Open access
Semantic Scholar
Dynamics of activating and repressive histone modifications in Drosophila neural stem cell lineages and brain tumors
M. D. Abdusselamoglu, Lisa Landskron, S. Bowman, E. Eroglu +3 more
2019Development11 citations Open access
Semantic Scholar
Structure-function analysis of microRNA 3′-end trimming by Nibbler
Wei Xie, I. Sowemimo, R. Hayashi, Juncheng Wang +4 more
2020Proceedings of the National Academy of Sciences of the United States of America10 citations Open access
Semantic Scholar
Subcellular analysis of pigeon hair cells implicates vesicular trafficking in cuticulosome formation and maintenance
Simon Nimpf, E. P. Malkemper, Mattias Lauwers, Lyubov Ushakova +7 more
2017eLife10 citations Open access
Semantic Scholar
Publisher Correction: Guided self-organization and cortical plate formation in human brain organoids
Madeline A. Lancaster, Nina S. Corsini, Simone Wolfinger, E. Gustafson +5 more
2018Nature Biotechnology9 citations Open access
Semantic Scholar
Experimental characterization of the human non-sequence-specific nucleic acid interactome
G. Dürnberger, T. Bürckstümmer, K. Huber, R. Giambruno +12 more
2013Genome Biology9 citations Open access
Semantic Scholar
Author Correction: Single-cell brain organoid screening identifies developmental defects in autism
Chong V. Li, J. Fleck, Catarina Martins-Costa, T. Burkard +11 more
2023Nature6 citations Open access
Semantic Scholar
CRISPR-UMI Step by Step: A protocol for robust CRISPR screening
Georg Michlits, T. Burkard, M. Novatchkova, U. Elling
20174 citations Open access
Semantic Scholar
Thiol-linked alkylation for the metabolic sequencing of RNA
V. Herzog, Brian Reichholf, Tobias Neumann, Philipp Rescheneder +6 more
2017bioRxiv3 citations Open access
Semantic Scholar
Systematic refinement of gene annotations by parsing mRNA 3′ end sequencing datasets
Pooja Bhat, T. Burkard, V. Herzog, Andrea Pauli +1 more
2021Methods in Enzymology2 citations Open access
Semantic Scholar
Haplobank methods collection
U. Elling, Reiner A. Wimmer, M. Kinzer, N. Schuller +6 more
20172 citations
Semantic Scholar
Kinetic logic of uridylation-mediated RNA decay
Annamaria Sgromo, Benjamin M. Jordan, Andrew Aarestad, David Mörsdorf +5 more
2026bioRxiv0 citations Open access
Semantic Scholar

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U. Elling×9
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Stefan L Ameres×7
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Nina S. Corsini×6
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