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Ji Dong · SciRah

Researcher profile · Semantic Scholar

Ji Dong

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Ji Dong — researcher profile on SciRah

h-index: 23
Works: 45
Citations: 4,202

Most-cited papers

A single-cell RNA-seq survey of the developmental landscape of the human prefrontal cortex
S. Zhong, S. Zhang, Xiao-Ying Fan, Qian Wu +11 more
2018Nature615 citations
Semantic Scholar
Single-Cell RNA-Seq Analysis Maps Development of Human Germline Cells and Gonadal Niche Interactions.
Li Li, Ji Dong, Li-Ying Yan, Jun Yong +20 more
2017Cell Stem Cell454 citations Open access
Semantic Scholar
Single-Cell Transcriptome Analysis Maps the Developmental Track of the Human Heart.
Yueli Cui, Yuxuan Zheng, Xi-Xi Liu, Li-Ying Yan +11 more
2019Cell Reports403 citations Open access
Semantic Scholar
Single-Cell RNA Sequencing Analysis Reveals Sequential Cell Fate Transition during Human Spermatogenesis.
Mei Wang, Xi-Xi Liu, Gang Chang, Yidong Chen +32 more
2018Cell Stem Cell401 citations Open access
Semantic Scholar
Single-cell multiomics sequencing and analyses of human colorectal cancer
Shuhui Bian, Yu Hou, Xin Zhou, Xian-Long Li +17 more
2018Science323 citations
Semantic Scholar
Single-cell DNA methylome sequencing of human preimplantation embryos
P. Zhu, Hong-Shan Guo, Yi-Xin Ren, Yu Hou +18 more
2017Nature Genetics293 citations
Semantic Scholar
Spatial transcriptomic survey of human embryonic cerebral cortex by single-cell RNA-seq analysis
Xiao-Ying Fan, Ji Dong, S. Zhong, Yuan Wei +11 more
2018Cell Research206 citations Open access
Semantic Scholar
Single-cell RNA-seq analysis unveils a prevalent epithelial/mesenchymal hybrid state during mouse organogenesis
Ji Dong, Yuqiong Hu, Xiao-Ying Fan, Xing-Long Wu +5 more
2018Genome Biology178 citations Open access
Semantic Scholar
Dissecting the transcriptome landscape of the human fetal neural retina and retinal pigment epithelium by single-cell RNA-seq analysis
Yuqiong Hu, Xiao-Ye Wang, Bo-Qiang Hu, Yu-Nuo Mao +9 more
2019PLoS Biology131 citations Open access
Semantic Scholar
Single-cell transcriptome analysis reveals cell lineage specification in temporal-spatial patterns in human cortical development
Xiao-Ying Fan, Yuanyuan Fu, Xin Zhou, Le Sun +10 more
2020Science Advances120 citations Open access
Semantic Scholar
DNA methylation and chromatin accessibility profiling of mouse and human fetal germ cells
Hong-Shan Guo, Bo-Qiang Hu, Li-Ying Yan, Jun Yong +15 more
2016Cell Research112 citations Open access
Semantic Scholar
In vitro differentiation of human embryonic stem cells into ovarian follicle-like cells
Dajung Jung, J. Xiong, M. Ye, Xunsi Qin +9 more
2017Nature Communications111 citations Open access
Semantic Scholar
Differentiation of transplanted haematopoietic stem cells tracked by single-cell transcriptomic analysis
Fang Dong, S. Hao, Sen Zhang, Caiying Zhu +17 more
2020Nature Cell Biology110 citations Open access
Semantic Scholar
Embryonic endothelial evolution towards first hematopoietic stem cells revealed by single-cell transcriptomic and functional analyses
Siyuan Hou, Zongcheng Li, Xiaona Zheng, Yun Gao +14 more
2020Cell Research106 citations Open access
Semantic Scholar
Single-Cell RNA-Seq Analysis Maps Development of Human Germline Cells and Gonadal Niche Interactions.
Li Li, Ji Dong, Li-Ying Yan, Jun Yong +20 more
2017Cell Stem Cell91 citations Open access
Semantic Scholar
Spatiotemporal transcriptome atlas reveals the regional specification of the developing human brain.
Yan-Xin Li, Zhongqiu Li, Changliang Wang, Min Yang +18 more
2023Cell81 citations Open access
Semantic Scholar
Cell-fate transition and determination analysis of mouse male germ cells throughout development
Jiexiang Zhao, P. Lu, Cong Wan, Yaping Huang +17 more
2021Nature Communications76 citations Open access
Semantic Scholar
Heterogeneity in endothelial cells and widespread venous arterialization during early vascular development in mammals
Siyuan Hou, Zongcheng Li, Ji Dong, Yun Gao +18 more
2022Cell Research70 citations Open access
Semantic Scholar
Circulating re-entrant waves promote maturation of hiPSC-derived cardiomyocytes in self-organized tissue ring
Jun-Jun Li, Lu-lu Zhang, Leqian Yu, Itsunari Minami +14 more
2020Communications Biology48 citations Open access
Semantic Scholar
TGF-β1 Negatively Regulates the Number and Function of Hematopoietic Stem Cells
Xiao-Fang Wang, Fang Dong, Sen Zhang, Wanzhu Yang +11 more
2018Stem Cell Reports48 citations Open access
Semantic Scholar
Deciphering the spatial-temporal transcriptional landscape of human hypothalamus development.
Xin Zhou, Yufeng Lu, Fangqi Zhao, Ji Dong +11 more
2021Cell Stem Cell45 citations Open access
Semantic Scholar
Characterization of mesenchymal stem cells in human fetal bone marrow by single-cell transcriptomic and functional analysis
Ping Zhang, Ji Dong, Xiao-Ying Fan, Jun Yong +8 more
2023Signal Transduction and Targeted Therapy42 citations Open access
Semantic Scholar
Distinct enhancer signatures in the mouse gastrula delineate progressive cell fate continuum during embryo development
Xian-Fa Yang, Bo-Qiang Hu, Jiaoyang Liao, Yun-Bo Qiao +12 more
2019Cell Research26 citations Open access
Semantic Scholar
Single-cell profiling reveals molecular basis of malignant phenotypes and tumor microenvironments in small bowel adenocarcinomas
Jingwei Yang, Xin Zhou, Ji Dong, Wen-Dong Wang +11 more
2022Cell Discovery23 citations Open access
Semantic Scholar
Spatially resolved expression landscape and gene-regulatory network of human gastric corpus epithelium
Ji Dong, Xing-Long Wu, Xin Zhou, Yuan Gao +12 more
2022Protein & Cell16 citations Open access
Semantic Scholar
Single-cell analysis reveals an Angpt4-initiated EPDC-EC-CM cellular coordination cascade during heart regeneration
Zekai Wu, Yuan Shi, Yueli Cui, Xin Xing +14 more
2022Protein & Cell14 citations Open access
Semantic Scholar
Brain circuits for retching-like behavior
Li-Fang Huo, Zhi-Min Ye, Mei-Ling Liu, Ziqing He +8 more
2023National Science Review12 citations Open access
Semantic Scholar
Single-cell analyses identify distinct and intermediate states of zebrafish pancreatic islet development
Chong Lu, Xiao-Ying Fan, Y. Guo, Zhenchao Cheng +11 more
2018Journal of Molecular Cell Biology12 citations Open access
Semantic Scholar
Cross‐species comparison illuminates the importance of iron homeostasis for splenic anti‐immunosenescence
Ziqing He, Weiya He, Chuanxia Hu, Jia-Yu Liao +7 more
2023Aging Cell10 citations Open access
Semantic Scholar
Integrating single-cell datasets with ambiguous batch information by incorporating molecular network features
Ji Dong, Pei-Jie Zhou, Yichong Wu, Yidong Chen +8 more
2021Briefings Bioinform.8 citations Open access
Semantic Scholar
Complexin-1 enhances ultrasound neurotransmission in the mammalian auditory pathway
Mei-Ling Liu, Changliang Wang, Li-Fang Huo, Jie Cao +17 more
2024Nature Genetics7 citations
Semantic Scholar
Enhancing single-cell cellular state inference by incorporating molecular network features
Ji Dong, Pei-Jie Zhou, Yichong Wu, Wen-Dong Wang +11 more
2019bioRxiv7 citations Open access
Semantic Scholar
Medium acidosis drives cardiac differentiation during mesendoderm cell fate specification from human pluripotent stem cells
Weiwei Liu, H. Hsieh, Ziqing He, Xia Xiao +6 more
2024Stem Cell Reports3 citations Open access
Semantic Scholar
Differentiation of transplanted haematopoietic stem cells tracked by single-cell transcriptomic analysis
Fang Dong, S. Hao, Sen Zhang, Caiying Zhu +17 more
2020Nature Cell Biology3 citations Open access
Semantic Scholar
Decoding the spatiotemporal development of the blood-brain barrier in human cortex.
Zhong-Qiu Li, Yan-Xin Li, Ziqing He, Changliang Wang +10 more
2026Cell Stem Cell2 citations
Semantic Scholar
Rapid pacing by circulating traveling waves improves maturation of hiPSC-derived cardiomyocytes in self-organized tissue ring
Jun-Jun Li, Lu-lu Zhang, Leqian Yu, Itsunari Minami +12 more
2019bioRxiv2 citations Open access
Semantic Scholar
Decoding the spatiotemporal development of human meninges.
Yan-Xin Li, Zhongqiu Li, Y. She, Ziqing He +8 more
2026Cell1 citations
Semantic Scholar
Modeling mammalian hibernation to improve organ cold preservation: Using the intestine as an example
Weiya He, Ziqing He, Wenjun Deng, Chu-Man Wu +12 more
2025Cell Research1 citations Open access
Semantic Scholar
Insights of mammalian hibernator-derived cholangiocyte organoids in improving liver cold preservation
Chu-Man Wu, Changliang Wang, Mei-Feng Gu, Weiya He +8 more
2025Protein & Cell1 citations Open access
Semantic Scholar
Establishment and characterization of adult human gastric epithelial progenitor‐like cell lines
Yuan Gao, Ji Dong, Shuyue Qi, Xin Zhou +5 more
2022Cell Proliferation1 citations Open access
Semantic Scholar
Identification and Characterization of the Expansin Genes in Triticum urartu in Response to Various Phytohormones
L. Peng, Yo Xu, X.-Q. Feng, Ju Zhang +7 more
2020Russian Journal of Genetics1 citations
Semantic Scholar
NDRG2 orchestrates structural and functional adaptation for cardioprotection during mammalian hibernation.
Ning Guo, Hai-Jian Sun, Yan Wei, Chu-Man Wu +8 more
2026Protein & Cell0 citations Open access
Semantic Scholar
Dissecting endothelial to haematopoietic stem cell transition by single-cell transcriptomic and functional analyses
Siyuan Hou, Zongcheng Li, Xiaona Zheng, Yun Gao +14 more
2020bioRxiv0 citations Open access
Semantic Scholar
Single-cell analyses show TGF-b1 reduces self-renewal and myeloid differentiation potentials in hematopoietic stem cells
Xiao-Fang Wang, Fang Dong, Sen Zhang, Wanzhu Yang +8 more
20170 citations Open access
Semantic Scholar
Stem Cell Repor ts
Wei-Wei Liu, H. Hsieh, Ziqing He, Xia Xiao +6 more
0 citations
Semantic Scholar

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