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V. Kalavacharla · SciRah

Researcher profile · Semantic Scholar

V. Kalavacharla

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V. Kalavacharla — researcher profile on SciRah

h-index: 20
Works: 51
Citations: 2,559

Most-cited papers

Comparative DNA sequence analysis of wheat and rice genomes.
M. Sorrells, M. la Rota, C. E. Bermudez-Kandianis, R. A. Greene +35 more
2003Genome Research435 citations Open access
Semantic Scholar
A Chromosome Bin Map of 16,000 Expressed Sequence Tag Loci and Distribution of Genes Among the Three Genomes of Polyploid Wheat
L. Qi, Benjamin Echalier, S. Chao, G. Lazo +43 more
2004Genetics430 citations
Semantic Scholar
The organization and rate of evolution of wheat genomes are correlated with recombination rates along chromosome arms.
E. Akhunov, A. Goodyear, S. Geng, L. Qi +29 more
2003Genome Research329 citations Open access
Semantic Scholar
Synteny perturbations between wheat homoeologous chromosomes caused by locus duplications and deletions correlate with recombination rates
E. Akhunov, A. Akhunova, A. Linkiewicz, J. Dubcovsky +27 more
2003Proceedings of the National Academy of Sciences of the United States of America144 citations Open access
Semantic Scholar
Development of an Expressed Sequence Tag (EST) Resource for Wheat (Triticum aestivum L.)
G. Lazo, S. Chao, D. Hummel, H. Edwards +37 more
2004Genetics105 citations Open access
Semantic Scholar
Analysis of Expressed Sequence Tag Loci on Wheat Chromosome Group 4
Miftahudin, K. Ross, X.-F. Ma, A. Mahmoud +46 more
2004Genetics100 citations Open access
Semantic Scholar
Group 3 Chromosome Bin Maps of Wheat and Their Relationship to Rice Chromosome 1
J. Munkvold, R. A. Greene, C. E. Bermudez-Kandianis, C. L. La Rota +34 more
2004Genetics92 citations
Semantic Scholar
Chromosome Bin Map of Expressed Sequence Tags in Homoeologous Group 1 of Hexaploid Wheat and Homoeology With Rice and Arabidopsis
J.-H. Peng, H. Zadeh, G. Lazo, J. P. Gustafson +26 more
2004Genetics92 citations
Semantic Scholar
A 2600-Locus Chromosome Bin Map of Wheat Homoeologous Group 2 Reveals Interstitial Gene-Rich Islands and Colinearity With Rice
E. Conley, V. Nduati, J. Gonzalez-Hernandez, A. Mesfin +33 more
2004Genetics90 citations Open access
Semantic Scholar
A Chromosome Bin Map of 2148 Expressed Sequence Tag Loci of Wheat Homoeologous Group 7
Khwaja G. Hossain, V. Kalavacharla, G. Lazo, J. Hegstad +42 more
2004Genetics76 citations
Semantic Scholar
A 2500-Locus Bin Map of Wheat Homoeologous Group 5 Provides Insights on Gene Distribution and Colinearity With Rice
A. Linkiewicz, L. Qi, B. Gill, A. Ratnasiri +28 more
2004Genetics76 citations
Semantic Scholar
Identification and analysis of common bean (Phaseolus vulgaris L.) transcriptomes by massively parallel pyrosequencing
V. Kalavacharla, Zhan-Ji Liu, B. Meyers, J. Thimmapuram +1 more
2011BMC Plant Biology63 citations Open access
Semantic Scholar
High-Resolution Radiation Hybrid Map of Wheat Chromosome 1D
V. Kalavacharla, Khwaja G. Hossain, Y. Gu, O. Riera-Lizarazu +5 more
2006Genetics62 citations
Semantic Scholar
Proceedings of the National Academy of Sciences
E. Akhunov, A. Akhunova, A. Linkiewicz, J. Dubcovsky +27 more
2003Proceedings of the National Academy of Sciences of the United States of America60 citations
Semantic Scholar
Radiation Hybrid Mapping of the Species Cytoplasm-Specific (scsae) Gene in Wheat
Khwaja G. Hossain, O. Riera-Lizarazu, V. Kalavacharla, M. I. Vales +2 more
2004Genetics51 citations Open access
Semantic Scholar
Deletion Mapping of Homoeologous Group 6-Specific Wheat Expressed Sequence Tags
H. Randhawa, M. Dilbirliği, D. Sidhu, M. Erayman +32 more
2004Genetics49 citations
Semantic Scholar
Comparative analysis of the root transcriptomes of cultivated sweetpotato (Ipomoea batatas [L.] Lam) and its wild ancestor (Ipomoea trifida [Kunth] G. Don)
S. Ponniah, J. Thimmapuram, Ketaki P. Bhide, V. Kalavacharla +1 more
2017BMC Plant Biology48 citations Open access
Semantic Scholar
Genome-Wide Profiling of Histone Modifications (H3K9me2 and H4K12ac) and Gene Expression in Rust (Uromyces appendiculatus) Inoculated Common Bean (Phaseolus vulgaris L.)
V. Ayyappan, V. Kalavacharla, J. Thimmapuram, Ketaki P. Bhide +6 more
2015PLoS ONE43 citations Open access
Semantic Scholar
Identification of expressed resistance gene-like sequences by data mining in 454-derived transcriptomic sequences of common bean (Phaseolus vulgaris L.)
Zhan-Ji Liu, Mollee C Crampton, A. Todd, V. Kalavacharla
2012BMC Plant Biology29 citations Open access
Semantic Scholar
Global analysis of switchgrass (Panicum virgatum L.) transcriptomes in response to interactive effects of drought and heat stresses
Rita K. Hayford, D. Serba, Shao-Jun Xie, V. Ayyappan +4 more
2022BMC Plant Biology23 citations Open access
Semantic Scholar
Comparative Analysis of Untargeted Metabolomics in Tolerant and Sensitive Genotypes of Common Bean (Phaseolus vulgaris L.) Seeds Exposed to Terminal Drought Stress
Mayavan Subramani, Carlos A. Urrea, V. Kalavacharla
2022Metabolites20 citations Open access
Semantic Scholar
Comparative transcriptome profiling of upland (VS16) and lowland (AP13) ecotypes of switchgrass
V. Ayyappan, M. Saha, J. Thimmapuram, V. Sripathi +4 more
2016Plant Cell Reports17 citations Open access
Semantic Scholar
Comparative Transcriptome Analysis of Tolerant and Sensitive Genotypes of Common Bean (Phaseolus vulgaris L.) in Response to Terminal Drought Stress
Mayavan Subramani, Carlos A. Urrea, Rasheed Habib, Ketaki P. Bhide +2 more
2023Plants16 citations Open access
Semantic Scholar
Molecular cytogenetic characterization of an alloplasmic durum wheat line with a portion of chromosome 1D of Triticum aestivum carrying the scsae gene
Khwaja G. Hossain, O. Riera-Lizarazu, V. Kalavacharla, M. I. Vales +3 more
200416 citations
Semantic Scholar
Common Bean Genetics, Breeding, and Genomics for Adaptation to Changing to New Agri-environmental Conditions
A. M. De Ron, V. Kalavacharla, S. Álvarez-García, P. Casquero +14 more
2019Genomic Designing of Climate-Smart Pulse Crops15 citations Open access
Semantic Scholar
Characterization and Expression Analysis of Common Bean Histone Deacetylase 6 during Development and Cold Stress Response
Rita K. Hayford, Ayalew Ligaba-Osena, Mayavan Subramani, Adrian P. Brown +3 more
2017International Journal of Genomics15 citations Open access
Semantic Scholar
Genome-wide profiling of histone (H3) lysine 4 (K4) tri-methylation (me3) under drought, heat, and combined stresses in switchgrass
V. Ayyappan, V. Sripathi, Shaojun Xie, M. Saha +6 more
2024BMC Genomics13 citations Open access
Semantic Scholar
Analyses of methylomes of upland and lowland switchgrass (Panicum virgatum) ecotypes using MeDIP-seq and BS-seq
M. Dworkin, Shao-Jun Xie, M. Saha, J. Thimmapuram +1 more
2017BMC Genomics9 citations Open access
Semantic Scholar
Radiation hybrid mapping in crop plants
V. Kalavacharla, Khwaja G. Hossain, O. Riera-Lizarazu, Y. Gu +2 more
20098 citations
Semantic Scholar
Marker-Assisted Molecular Profiling, Deletion Mutant Analysis, and RNA-Seq Reveal a Disease Resistance Cluster Associated with Uromyces appendiculatus Infection in Common Bean Phaseolus vulgaris L.
A. Todd, N. Donofrio, V. Sripathi, P. McClean +3 more
2017International Journal of Molecular Sciences7 citations Open access
Semantic Scholar
Chapter 6 Radiation Hybrid Mapping in Crop Plants
V. Kalavacharla, Khwaja G. Hossain, O. Riera-Lizarazu, Y. Gu +2 more
20097 citations
Semantic Scholar
Molecular cytogenetic characterization of an alloplasmic durum wheat line with a portion of chromosome 1D of Triticum aestivum carrying the scs(ae) gene.
Khwaja G. Hossain, O. Riera-Lizarazu, V. Kalavacharla, M. I. Vales +3 more
2004Genome7 citations
Semantic Scholar
Genome-wide identification of histone methylation (H3K9me2) and acetylation (H4K12ac) marks in two ecotypes of switchgrass (Panicum virgatum L.)
V. Ayyappan, V. Sripathi, V. Kalavacharla, M. Saha +3 more
2019BMC Genomics6 citations Open access
Semantic Scholar
Bioinformatics Tools and Genomic Resources Available in Understanding the Structure and Function of Gossypium
V. Sripathi, Ramesh Buyyarapu, S. Kumpatla, A. Williams +4 more
20166 citations Open access
Semantic Scholar
Identification of molecular markers associated with the deleted region in common bean (Phaseolus vulgaris) ur-3 mutants
Kalpalatha Melmaiee, A. Todd, P. McClean, R. Lee +3 more
20136 citations
Semantic Scholar
Chapter 16 – Plant Epigenomics
V. Kalavacharla, Mayavan Subramani, V. Ayyappan, M. Dworkin +1 more
20174 citations
Semantic Scholar
Quantification and Gene Expression Analysis of Histone Deacetylases in Common Bean during Rust Fungal Inoculation
Kalpalatha Melmaiee, V. Kalavacharla, Adrian P. Brown, A. Todd +2 more
2015International Journal of Genomics2 citations Open access
Semantic Scholar
HIGHER CONTENT OF FE CAUSES DIFFERENTIAL GENE EXPRESSION IN COMMON BEAN
Maren A. Johnson, Cheyenne Durant, Cherokee N. Durant, Lindsey J. Shimpa +2 more
20171 citations
Semantic Scholar
Understanding histone-DNA interactions in the common bean (Phaseolus vulgaris L.)
V. Kalavacharla
2013Epigenetics & Chromatin1 citations Open access
Semantic Scholar
Identification of expressed resistance gene-like sequences by data mining in 454-derived transcriptomic sequences of common bean (Phaseolus vulgarisL.)
Zhan-Ji Liu, Mollee C Crampton, A. Todd, V. Kalavacharla
2012BMC Plant Biology1 citations Open access
Semantic Scholar
Development of a Reference Transcriptome and Identification of Differentially Expressed Genes Linked to Salt Stress in Salt Marsh Grass (Sporobolus alterniflorus) along Delaware Coastal Regions
A. Todd, Ketaki P. Bhide, Rita K. Hayford, V. Ayyappan +5 more
2024Plants0 citations Open access
Semantic Scholar
Global analysis of switchgrass (Panicum virgatum L.) transcriptomes in response to interactive effects of drought and heat stresses
Rita K. Hayford, D. Serba, Shao-Jun Xie, V. Ayyappan +4 more
2022BMC Plant Biology0 citations Open access
Semantic Scholar
HIGHER CONCENTRATION OF Fe LEADS TO HISTONE MODIFICATION IN COMMON BEAN TISSUE
Cheyenne Durant, Cherokee N. Durant, Lindsey J. Shimpa, Maren A. Johnson +2 more
20170 citations
Semantic Scholar
Integrated Transcriptomic and Epigenomic Analysis in Switchgrass
V. Kalavacharla
20160 citations
Semantic Scholar
Development of Reference Epigenomes and Transcriptomes in Switchgrass
V. Kalavacharla
20150 citations
Semantic Scholar
Understanding Disease Resistance Signaling in Common Bean ( Phaseolus vulgaris L.) through Integrated Epigenomic and Transcriptomic Analyses
V. Kalavacharla
20150 citations
Semantic Scholar
Integrated Epigenomic and Transcriptomic Profiling of the Resistance Response of Common Bean ( Phaseolus vulgaris ) to Bean Rust ( Uromyces appendiculatus )
V. Kalavacharla
20150 citations
Semantic Scholar
Understanding histone-DNA interactions in the common bean (Phaseolus vulgaris L.)
V. Kalavacharla
2013Epigenetics & Chromatin0 citations Open access
Semantic Scholar
Identification, cloning, and expression of a full-length methyltransferase gene from switchgrass (Panicum virgatum L.) genotypes AP13 and VS16
B. McCarthy, Adrian P. Brown, D. Serba, M. Saha +1 more
20130 citations
Semantic Scholar
ESTs and their Role in Functional Genomics
Kalpalatha Melmaiee, V. Kalavacharla
20100 citations
Semantic Scholar

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