Jun-Hong Choi

Most-cited papers

1. Symbolic recording of signalling and cis-regulatory element activity to DNA

   Wei Chen, Jun-Hong Choi, Xiao-Yi Li, J. Nathans +12 more

   2024Nature52 citations Open access

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2. The lives of cells, recorded

   Amjad Askary, Wei Chen, Jun-Hong Choi, Lucia Y. Du +7 more

   2024Nature reviews genetics30 citations Open access

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3. Lineage recording in monoclonal gastruloids reveals heritable modes of early development

   Samuel G. Regalado, Cheng-Xiang Qiu, Sanjay Kottapalli, B. Martin +9 more

   2025bioRxiv12 citations Open access

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4. Molecular recording using DNA Typewriter

   Hanna Liao, Jun-Hong Choi, J. Shendure

   2024Nature Protocols10 citations

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5. SciPhy: A Bayesian phylogenetic framework using sequential genetic lineage tracing data

   S. Seidel, A. Zwaans, Samuel G. Regalado, Jun-Hong Choi +2 more

   2026bioRxiv8 citations Open access

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6. Molecular circuits for genomic recording of cellular events

   Wei Chen, Jun-Hong Choi

   2025Trends in Genetics7 citations Open access

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7. A diversified parts list for mammalian genome engineering and molecular recording

   Troy A. McDiarmid, Megan L. Taylor, Wei Chen, Florence M. Chardon +13 more

   2025Nature Biotechnology4 citations Open access

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8. A DNA Typewriter records the cell lineage history of a mouse, from zygote to late organogenesis.

   Qi Yu, Haedong Kim, S. Seidel, James F. Acosta-Clark +17 more

   2026Science3 citations Open access

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9. Diversified, miniaturized and ancestral parts for mammalian genome engineering and molecular recording

   Troy A. McDiarmid, Megan L. Taylor, Wei Chen, Florence M. Chardon +13 more

   2024bioRxiv2 citations Open access

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10. In vivo reconstruction of the cell lineage history of a developing mouse with DNA Typewriter, from zygote to late organogenesis

    Qi Yu, Haedong Kim, S. Seidel, James F. Acosta-Clark +17 more

    2026bioRxiv1 citations Open access

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11. A fluctuation test for gastruloid heterogeneity.

    Samuel G. Regalado, Cheng-Xiang Qiu, Sanjay Kottapalli, Chau Huynh +13 more

    2026Cell1 citations Open access

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12. Multiplex programming of mappable, molecularly tagged genomic deletions

    Aidan Keith, R. Daza, Jonas Koeppel, Hanna Liao +9 more

    2026bioRxiv0 citations Open access

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13. Lineage tracing reveals asynchronous fate restriction in mouse embryos and stem cell-derived embryo models

    Yun-Zheng Liu, Jihye Park, Laura Amaya, Sergi Junyent +16 more

    2026bioRxiv0 citations Open access

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14. Time-resolved lineage recording reveals a pre-existing, heritable cell state underlying metastatic potential

    Jihye Park, Yoojin Chang, Joshua S. Schiffman, Divya Koyyalagunta +7 more

    2026bioRxiv0 citations Open access

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15. A molecular proximity sensor based on an engineered, dual-component guide RNA

    Jun-Hong Choi, Wei Chen, Hanna Liao, Xiao-Yi Li +1 more

    2025eLife0 citations Open access

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16. Chromatin context-dependent regulation and epigenetic manipulation of prime editing

    Xiao-Yi Li, Wei Chen, B. Martin, Diego Calderon +8 more

    2023bioRxiv0 citations Open access

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