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M. Cookson · SciRah

Researcher profile · Semantic Scholar

M. Cookson

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M. Cookson — researcher profile on SciRah

h-index: 6
Works: 62
Citations: 196

Most-cited papers

DJ‐1 is not a deglycase and makes a modest contribution to cellular defense against methylglyoxal damage in neurons
Melissa Conti Mazza, S. Shuck, Jiu-Sheng Lin, Michael A. Moxley +3 more
2022Journal of Neurochemistry45 citations Open access
Semantic Scholar
Sex effects on gene expression across the human cerebral cortex at cell type resolution.
A. DeCasien, P. Auluck, Siyuan Liu, Ningping Feng +5 more
2026Science16 citations
Semantic Scholar
Alpha‐synuclein triggers T‐cell response. Is Parkinson's disease an autoimmune disorder?
Sara Bandres-Ciga, M. Cookson
2017Movement Disorders15 citations
Semantic Scholar
How Parkinson’s Disease-Linked LRRK2 Mutations Affect Different CNS Cell Types
Hannah M. Bailey, M. Cookson
2024Journal of Parkinson's Disease13 citations Open access
Semantic Scholar
14-3-3 binding maintains the Parkinson’s associated kinase LRRK2 in an inactive state
J. A. Martinez Fiesco, Ning Li, Astrid Alvarez de la Cruz, Riley D. Metcalfe +3 more
2024bioRxiv12 citations Open access
Semantic Scholar
14-3-3 binding maintains the Parkinson’s associated kinase LRRK2 in an inactive state
J. A. Martinez Fiesco, A. Beilina, Astrid Alvarez de la Cruz, Ning Li +3 more
2025Nature Communications8 citations Open access
Semantic Scholar
APOE genotypes differentially remodel the astrocytic lipid droplet-associated proteome to shape lipid droplet dynamics
Carla Cuní-López, Jessica T. Root, Ying Hao, I. Kowal +9 more
2025bioRxiv6 citations Open access
Semantic Scholar
Opposing actions of JIP4 and RILPL1 provide antagonistic motor force to dynamically regulate membrane reformation during lysosomal tubulation/sorting driven by LRRK2
L. Bonet-Ponce, Tsion Tegicho, A. Beilina, Jillian H. Kluss +2 more
2024bioRxiv6 citations Open access
Semantic Scholar
Mechanisms of lysosomal tubulation and sorting driven by LRRK2
L. Bonet-Ponce, Jillian H. Kluss, M. Cookson
2024Biochemical Society Transactions6 citations
Semantic Scholar
ProtPipe: A Multifunctional Data Analysis Pipeline for Proteomics and Peptidomics
Zi-Yi Li, Cory A. Weller, Syed Shah, Nicholas Johnson +20 more
2024Genomics, Proteomics & Bioinformatics6 citations Open access
Semantic Scholar
Organellomics: AI-driven deep organellar phenotyping reveals novel ALS mechanisms in human neurons
Sagy Krispin, Welmoed van Zuiden, Yehuda M. Danino, Noam Rudberg +19 more
2026bioRxiv5 citations Open access
Semantic Scholar
Integrative analysis reveals generalizable human neurodegenerative disease-associated glial states
Liam Horan-Portelance, Dominic J. Acri, Alexandra Mann, Janet Brooks +4 more
2025bioRxiv5 citations Open access
Semantic Scholar
Sex effects on gene expression across the human cerebral cortex at single cell resolution
A. DeCasien, P. Auluck, Siyuan Liu, Stefano Marenco +2 more
2025bioRxiv5 citations Open access
Semantic Scholar
LRRK2 negatively regulates glucose tolerance via regulation of membrane translocation of GLUT4 in adipocytes
F. Kawakami, Motoki Imai, Yuki Isaka, M. Cookson +11 more
2023FEBS Open Bio5 citations Open access
Semantic Scholar
The complete genome of the KOLF2.1J reference iPSC line
P. Jerez, A. Rhie, Juhyun Kim, Prajna Hebbar +31 more
2026bioRxiv4 citations Open access
Semantic Scholar
Differential LRRK2 signalling and gene expression in WT-LRRK2 and G2019S-LRRK2 mouse microglia treated with zymosan and MLi2
Iqra Nazish, A. Mamais, Anna Mallach, Conceição Bettencourt +7 more
2023bioRxiv4 citations Open access
Semantic Scholar
Cerebellum mitochondrial DNA copy number is increased in Parkinson's disease.
Talia Beglarian, David R. Tyrpak, J. R. Gibbs, J. A. MacKay +13 more
2025Brain Communications3 citations Open access
Semantic Scholar
Mitochondrial DNA Variation in the Aging Human Cerebral Cortex and Cerebellum
Audrey A. Omidsalar, David R. Tyrpak, J. A. MacKay, K. Yen +9 more
2025Aging Cell2 citations Open access
Semantic Scholar
A Common PD-Risk GBA1 Variant Disrupts LIMP2 Interaction, Impairs Glucocerebrosidase Function, and Drives Lysosomal and Mitochondrial Dysfunction
Oliver B. Davis, Jennifer E. Kung, Sonnet S. Davis, Rajarshi Ghosh +32 more
2025bioRxiv2 citations Open access
Semantic Scholar
Temporal dynamics of proteome and phosphorproteome during neuronal differentiation in the reference KOLF2.1J iPSC line
Ying Hao, Zi-Yi Li, Erika Lara, Daniel M. Ramos +18 more
2025bioRxiv2 citations Open access
Semantic Scholar
JIP4 and RILPL1 utilize opposing motor force to dynamically regulate lysosomal tubulation
L. Bonet-Ponce, Tsion Tegicho, Nuria Fernandez-Martinez, I. A. Rozenberg +5 more
2025Journal of Cell Biology2 citations
Semantic Scholar
Large-scale HLA immunopeptidome and interactome profiling in microglia
Sydney Klaisner, Ying Hao, A. Beilina, Jae-Hyeon Park +16 more
2025bioRxiv2 citations Open access
Semantic Scholar
Haplotype-Resolved DNA Methylation at the APOE Locus identifies Allele-Specific Epigenetic Signatures Relevant to Alzheimer’s Disease Risk
Rylee M. Genner, Melissa Meredith, Abraham Moller, Cory A. Weller +19 more
2025bioRxiv2 citations Open access
Semantic Scholar
A xeno-free protocol for rapid differentiation of human iPSC-derived microglia from the KOLF2.1J reference line
N. A. Oliveira, Katherine R. Lewkowicz, Patricia A. Clow, Michael E. Ward +3 more
2025bioRxiv2 citations Open access
Semantic Scholar
Decreased SNCA Expression in Whole-Blood RNA Analysis of Parkinson’s Disease Adjusting for Lymphocytes
Kayla Xu, Ivo Violich, Elizabeth Hutchins, E. Alsop +7 more
2024bioRxiv2 citations Open access
Semantic Scholar
Single-cell spatial transcriptomics reveals molecular patterns of selective neuronal vulnerability to α-synuclein pathology in a transgenic mouse model of Lewy body disease
Liam Horan-Portelance, M. Iba, Dominic J. Acri, J. Gibbs +2 more
2024bioRxiv2 citations Open access
Semantic Scholar
Large structural variants in KOLF2.1J are unlikely to compromise neurological disease modelling
Mallory Ryan, Justin A. McDonough, Michael E. Ward, M. Cookson +2 more
2024bioRxiv2 citations Open access
Semantic Scholar
Large-scale pathway-specific polygenic risk, transcriptomic community networks and functional inferences in Parkinson disease
S. Bandres-Ciga, S. Saez-Atienzar, Jj Kim, MB Makarious +22 more
2020bioRxiv2 citations Open access
Semantic Scholar
Population Attributable Risk in Alzheimer and Parkinson Diseases
Lietsel Jones, C. Cerquera-Cleves, A. Schuh, M. Makarious +8 more
2026Neurology: Genetics1 citations Open access
Semantic Scholar
Temporal proteomic and phosphoproteomic dynamics during neuronal differentiation in the reference iPSC line KOLF2.1J.
Yinghong Hao, Zi-Yi Li, Erika Lara, Daniel M. Ramos +23 more
2026Science Signaling1 citations
Semantic Scholar
SALRR: Scalable Analysis of Long-Read RNA-Seq Enables Comprehensive Transcriptome Profiling in Human Brain
C. Kouam, Jackson Mingle, Pilar Álvarez Jerez, A. Evans +30 more
2026bioRxiv1 citations Open access
Semantic Scholar
APOE genotypes differentially remodel the astrocytic lipid droplet proteome to shape lipid droplet dynamics
Carla Cuní-López, Jessica T. Root, Ying Hao, N. Blomberg +13 more
2026Nature Communications1 citations Open access
Semantic Scholar
Generation of Blood Vascular Endothelial-Neural 3D Organoids by Serial Induction of Differentiation on Human iPSC-Derived Embryoid Bodies
Tongguang Wang, Anna M. Bagnell, Valerie McDonald, Benjamin D. Gastfriend +6 more
2026Cells1 citations Open access
Semantic Scholar
Long-read sequencing identifies FGF14 repeat expansions in Parkinson’s disease
F. Akçimen, K. Daida, L. Lange, Abraham Moller +23 more
2025Brain : a journal of neurology1 citations Open access
Semantic Scholar
3D organoids containing endothelial and neural cells generation by serial inductions of differentiation on human iPSC-derived embryoid bodies
Tongguang Wang, Anna M. Bagnell, Valerie McDonald, Benjamin D. Gastfriend +6 more
2025bioRxiv1 citations
Semantic Scholar
A Xeno-Free Protocol for Rapid Differentiation of Human iPSC-Derived Microglia from the KOLF2.1J Reference Line
N. A. Oliveira, Katherine R. Lewkowicz, Patricia A. Clow, Michael E. Ward +3 more
2025Bioengineering1 citations Open access
Semantic Scholar
Cell-specific RNA isoform remodeling in the aging mouse brain
Abid Rehman, Megan A Duffy, Katarína Grešová, Cédric Belair +9 more
2025bioRxiv1 citations
Semantic Scholar
Long-Read epigenetic clocks identify improved brain aging predictions
S. Grant, S. J. Eger, M. Makarious, Melissa Meredith +21 more
2025bioRxiv1 citations Open access
Semantic Scholar
Characterization of DNA methylation in PBMCs and donor-matched iPSCs shows methylation is reset during stem cell reprogramming
X. Reed, Cory A. Weller, S. Saez-Atienzar, A. Beilina +11 more
2024bioRxiv1 citations Open access
Semantic Scholar
Assessment of common genetic variation in Alzheimer’s and Parkinson’s diseases reveals global distinction in population attributable risk
Lietsel Jones, C. Cerquera-Cleves, A. Schuh, Mary B Makarious +8 more
2024medRxiv1 citations Open access
Semantic Scholar
Differential LRRK2 Signalling and Gene Expression in WT-LRRK2 and G2019S-LRRK2 Mouse Microglia Treated with Zymosan and MLi2
Iqra Nazish, A. Mamais, Anna Mallach, Conceição Bettencourt +7 more
2023Cells1 citations Open access
Semantic Scholar
A Proteomic Resource of Human iPSC-derived Neurons Exposed to Neurotropic Viruses
Zi-Yi Li, Negin P. Martin, Jacob Epstein, Shih-Heng Chen +15 more
2026Scientific Data0 citations Open access
Semantic Scholar
Region-specific transcriptional signatures of brain aging in the absence of neuropathology at the single-cell level
Monica E. Mesecar, Megan F. Duffy, Dominic J. Acri, Jin-Hui Ding +11 more
2026npj Aging0 citations Open access
Semantic Scholar
Integration of cell-specific gene expression and chromatin accessibility facilitates localization of neurodegenerative risk in microglia
X. Reed, Dominic J. Acri, A. Beilina, Jin-Hui Ding +15 more
2026bioRxiv0 citations Open access
Semantic Scholar
iPSC Neurodegenerative Disease Initiative isogenic CAG repeat iPSC line for Huntington’s disease
Lisa Salazar, Mara S. Burns, Jennifer T. Stocksdale, Keona Q. Wang +10 more
2026bioRxiv0 citations Open access
Semantic Scholar
iPSC neurodegenerative disease initiative isogenic CAG repeat iPSC line for Huntington's disease.
Lisa Salazar, Mara S. Burns, Jennifer T. Stocksdale, Keona Q. Wang +10 more
2026Journal of Huntington's Disease0 citations Open access
Semantic Scholar
Parkinson disease-associated protein DJ-1 regulates the autophagic-lysosomal pathway through ROS-dependent modulation of the AMPK/mTORC1 axis
Francesco Agostini, F. De Lazzari, A. Beilina, Bibiana Sgalletta +8 more
2026bioRxiv0 citations Open access
Semantic Scholar
Is SORL1 a common genetic target across neurodegenerative diseases? A multi-ancestry biobank study.
M. Khani, Sheila N Yeboah, C. Cerquera-Cleves, Alexandra Kedmi +24 more
2026Brain : a journal of neurology0 citations Open access
Semantic Scholar
Long-read sequencing maps transposable element variation and its regulatory and epigenetic effects in the human brain
Alexis Ayuketah, Melissa Meredith, Cristian Groza, J. Moller +27 more
2026bioRxiv0 citations Open access
Semantic Scholar
Characterization of DNA methylation in PBMCs and donor-matched iPSCs shows age-related methylation is reset during stem cell reprogramming
X. Reed, Cory A. Weller, S. Saez-Atienzar, A. Beilina +12 more
2026PLoS ONE0 citations Open access
Semantic Scholar

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