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Bastien Llamas · SciRah

Researcher profile · Semantic Scholar

Bastien Llamas

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Bastien Llamas — researcher profile on SciRah

h-index: 39
Works: 140
Citations: 9,653

Most-cited papers

Neanderthal behaviour, diet, and disease inferred from ancient DNA in dental calculus
L. Weyrich, S. Duchêne, Julien Soubrier, Luis A. Arriola +27 more
2017Nature451 citations Open access
Semantic Scholar
Parallel paleogenomic transects reveal complex genetic history of early European farmers
Mark Lipson, Anna Szécsényi-Nagy, S. Mallick, A. Pósa +53 more
2017Nature333 citations Open access
Semantic Scholar
Ancient mitochondrial DNA provides high-resolution time scale of the peopling of the Americas
Bastien Llamas, Lars Fehren-Schmitz, Guido Valverde, Julien Soubrier +27 more
2016Science Advances323 citations Open access
Semantic Scholar
Reconstructing the Deep Population History of Central and South America
C. Posth, Nathan Nakatsuka, Iosif Lazaridis, P. Skoglund +68 more
2018Cell309 citations Open access
Semantic Scholar
Aboriginal mitogenomes reveal 50,000 years of regionalism in Australia
R. Tobler, A. Rohrlach, Julien Soubrier, P. Bover +20 more
2017Nature216 citations Open access
Semantic Scholar
From the field to the laboratory: Controlling DNA contamination in human ancient DNA research in the high-throughput sequencing era
Bastien Llamas, Guido Valverde, Lars Fehren-Schmitz, L. Weyrich +2 more
2017197 citations Open access
Semantic Scholar
Current evidence allows multiple models for the peopling of the Americas
B. Potter, J. Baichtal, A. Beaudoin, Lars Fehren-Schmitz +12 more
2018Science Advances131 citations Open access
Semantic Scholar
Ethics of DNA Research on Human Remains: Five Globally Applicable Guidelines
Songül Alpaslan-Roodenberg, David Anthony, Hiba Babiker, E. Bánffy +60 more
2021Nature109 citations Open access
Semantic Scholar
Early cave art and ancient DNA record the origin of European bison
Julien Soubrier, Graham Gower, Kefei Chen, Stephen M. Richards +44 more
2016Nature Communications109 citations Open access
Semantic Scholar
A Paleogenomic Reconstruction of the Deep Population History of the Andes
Nathan Nakatsuka, Iosif Lazaridis, Chiara Barbieri, P. Skoglund +46 more
2020Cell107 citations Open access
Semantic Scholar
Binding affinities of 438 HLA proteins to complete proteomes of seven pandemic viruses and distributions of strongest and weakest HLA peptide binders in populations worldwide
Rodrigo Barquera, Evelyn Collen, D. Di, S. Buhler +4 more
2020HLA100 citations Open access
Semantic Scholar
Ten millennia of hepatitis B virus evolution
Arthur Kocher, L. Papac, Rodrigo Barquera, F. Key +166 more
2021Science99 citations Open access
Semantic Scholar
Genome of the Tasmanian tiger provides insights into the evolution and demography of an extinct marsupial carnivore
Charles Y. Feigin, Axel H. Newton, L. Doronina, J. Schmitz +10 more
2017Nature Ecology & Evolution91 citations Open access
Semantic Scholar
Experimental conditions improving in‐solution target enrichment for ancient DNA
Diana I. Cruz-Dávalos, Bastien Llamas, Charleen Gaunitz, A. Fages +14 more
2017Molecular Ecology Resources89 citations
Semantic Scholar
Megafaunal isotopes reveal role of increased moisture on rangeland during late Pleistocene extinctions
M. Rabanus-Wallace, M. Wooller, G. Zazula, Elen Shute +6 more
2017Nature Ecology &Evolution82 citations
Semantic Scholar
Spatiotemporal landscape genetics: Investigating ecology and evolution through space and time
Lindsey E. Fenderson, A. Kovach, Bastien Llamas
2019Molecular Ecology76 citations
Semantic Scholar
Systematic benchmark of ancient DNA read mapping
Adrien Oliva, R. Tobler, A. Cooper, Bastien Llamas +1 more
2021Briefings Bioinform.57 citations
Semantic Scholar
Stochastic models support rapid peopling of Late Pleistocene Sahul
C. Bradshaw, Kasih Norman, S. Ulm, A. Williams +15 more
2021Nature Communications50 citations Open access
Semantic Scholar
Genozip: a universal extensible genomic data compressor
D. Lan, R. Tobler, Yassine Souilmi, Bastien Llamas
2021Bioinform.50 citations Open access
Semantic Scholar
Widespread male sex bias in mammal fossil and museum collections
Graham Gower, Lindsey E. Fenderson, A. T. Salis, K. Helgen +7 more
2019Proceedings of the National Academy of Sciences of the United States of America50 citations Open access
Semantic Scholar
Human evolution: a tale from ancient genomes
Bastien Llamas, E. Willerslev, L. Orlando
2017Philosophical Transactions of the Royal Society B: Biological Sciences49 citations Open access
Semantic Scholar
Ancient DNA reconstructs the genetic legacies of pre-contact Puerto Rico communities
M. A. Nieves-Colón, W. Pestle, Austin W. Reynolds, Bastien Llamas +6 more
2019bioRxiv47 citations Open access
Semantic Scholar
The landscape of genomic structural variation in Indigenous Australians
Andre L. M. Reis, Melissa Rapadas, J. Hammond, H. Gamaarachchi +17 more
2023bioRxiv41 citations Open access
Semantic Scholar
Arrival routes of first Americans uncertain
B. Potter, A. Beaudoin, C. Haynes, V. Holliday +10 more
2018Science41 citations
Semantic Scholar
Ancient mitochondrial genomes clarify the evolutionary history of New Zealand's enigmatic acanthisittid wrens.
Kieren J. Mitchell, Jamie R. Wood, Bastien Llamas, P. Mclenachan +4 more
2016Molecular Phylogenetics and Evolution36 citations
Semantic Scholar
Additional evaluations show that specific BWA‐aln settings still outperform BWA‐mem for ancient DNA data alignment
Adrien Oliva, R. Tobler, Bastien Llamas, Yassine Souilmi
2021Ecology and Evolution32 citations Open access
Semantic Scholar
Late pleistocene Australian marsupial DNA clarifies the affinities of extinct megafaunal kangaroos and wallabies.
Bastien Llamas, Paul Brotherton, Kieren J. Mitchell, J. Templeton +8 more
2015Molecular biology and evolution32 citations Open access
Semantic Scholar
Equitable Expanded Carrier Screening Needs Indigenous Clinical and Population Genomic Data.
S. Easteal, R. Arkell, Renzo F. Balboa, S. Bellingham +37 more
2020American Journal of Human Genetics31 citations Open access
Semantic Scholar
Mitogenomes Reveal Two Major Influxes of Papuan Ancestry across Wallacea Following the Last Glacial Maximum and Austronesian Contact
Gludhug A. Purnomo, Kieren J. Mitchell, S. O’Connor, S. Kealy +8 more
2021Genes28 citations Open access
Semantic Scholar
The origin and phylogenetic relationships of the New Zealand ravens.
R. Scofield, Kieren J. Mitchell, Jamie R. Wood, V. D. De Pietri +3 more
2017Molecular Phylogenetics and Evolution27 citations
Semantic Scholar
Genetic studies of the peopling of the Americas: What insights do diachronic mitochondrial genome datasets provide?
Bastien Llamas, K. Harkins, Lars Fehren-Schmitz
201727 citations Open access
Semantic Scholar
Allelic bias when performing in-solution enrichment of ancient human DNA
Roberta Davidson, Matthew P Williams, Xavier Roca-Rada, Kalina Kassadjikova +3 more
2023bioRxiv26 citations Open access
Semantic Scholar
Ancient mitochondrial genomes from the Argentinian Pampas inform the early peopling of the Southern Cone of South America
Xavier Roca-Rada, Gustavo G. Politis, Pablo G. Messineo, Nahuel A. Scheifler +8 more
2021iScience22 citations Open access
Semantic Scholar
Unraveling the phylogenetic relationships of the extinct bovid Myotragus balearicus Bate 1909 from the Balearic Islands
P. Bover, Bastien Llamas, Kieren J. Mitchell, Vicki A. Thomson +4 more
2019Quaternary Science Reviews20 citations
Semantic Scholar
Ancient DNA Analysis Suggests Negligible Impact of the Wari Empire Expansion in Peru’s Central Coast during the Middle Horizon
Guido Valverde, María Inés Barreto Romero, Isabel Flores Espinoza, A. Cooper +3 more
2016PLoS ONE19 citations Open access
Semantic Scholar
genozip: a fast and efficient compression tool for VCF files
D. Lan, R. Tobler, Yassine Souilmi, Bastien Llamas
2020Bioinform.18 citations Open access
Semantic Scholar
Ancient genomes reveal over two thousand years of dingo population structure
Yassine Souilmi, Sally Wasef, Matthew P Williams, G. Conroy +17 more
2024Proceedings of the National Academy of Sciences of the United States of America16 citations Open access
Semantic Scholar
Millennial processes of population decline, range contraction and near extinction of the European bison
J. A. Pilowsky, Stuart C. Brown, Bastien Llamas, Ayla L. van Loenen +7 more
2023Proceedings of the Royal Society B16 citations Open access
Semantic Scholar
Equity, diversity, and inclusion at the Global Alliance for Genomics and Health
Neerjah Skantharajah, S. Baichoo, Tiffany F. Boughtwood, Esmeralda Casas-Silva +21 more
2023Cell Genomics16 citations Open access
Semantic Scholar
Runes from Lány (Czech Republic) - The oldest inscription among Slavs. A new standard for multidisciplinary analysis of runic bones
J. Macháček, Robert Nedoma, P. Dresler, Ilektra Schulz +7 more
202116 citations Open access
Semantic Scholar
A strategy for building and using a human reference pangenome
Bastien Llamas, Giuseppe Narzisi, Valerie A. Schneider, P. Audano +36 more
2019F1000Research16 citations Open access
Semantic Scholar
The immunogenetic impact of European colonization in the Americas
Evelyn Collen, A. Johar, J. C. Teixeira, Bastien Llamas
2022Frontiers in Genetics15 citations Open access
Semantic Scholar
Low-cost cross-taxon enrichment of mitochondrial DNA using in-house synthesised RNA probes
Stephen M. Richards, Nelli Hovhannisyan, M. Gilliham, Joshua D. Ingram +8 more
2019PLoS ONE15 citations Open access
Semantic Scholar
Population size history from short genomic scaffolds: how short is too short?
Graham Gower, J. Tuke, AB Rohrlach, Julien Soubrier +3 more
2018bioRxiv15 citations Open access
Semantic Scholar
Cases of trisomy 21 and trisomy 18 among historic and prehistoric individuals discovered from ancient DNA
A. Rohrlach, Maïté Rivollat, Patxuka de-Miguel-Ibáñez, U. Nordfors +22 more
2024Nature Communications14 citations Open access
Semantic Scholar
More arrows in the ancient DNA quiver: use of paleoepigenomes and paleomicrobiomes to investigate animal adaptation to environment.
Yichen Liu, L. Weyrich, Bastien Llamas
2019Molecular biology and evolution14 citations
Semantic Scholar
Ancient DNA Studies in Pre-Columbian Mesoamerica
Xavier Roca-Rada, Yassine Souilmi, J. C. Teixeira, Bastien Llamas
2020Genes13 citations Open access
Semantic Scholar
Molecular resolution to a morphological controversy: The case of North American fossil muskoxen Bootherium and Symbos.
P. Bover, Bastien Llamas, Vicki A. Thomson, J. Pons +2 more
2018Molecular Phylogenetics and Evolution13 citations
Semantic Scholar
The genetic history of Portugal over the past 5,000 years
Xavier Roca-Rada, Roberta Davidson, Matthew P. Williams, Vanessa Villalba-Mouco +22 more
2024bioRxiv12 citations Open access
Semantic Scholar
Exploring the Potential of Genome-Wide Hybridization Capture Enrichment for Forensic DNA Profiling of Degraded Bones
C. Haarkötter, Xavier Roca-Rada, M. Saiz, Diana C. Vinueza-Espinosa +7 more
2024Genes11 citations Open access
Semantic Scholar

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