Researcher profile · Semantic Scholar

J. Atwood

h-index: 15
Works: 32
Citations: 2,082

Most-cited papers

The Trypanosoma cruzi Proteome
J. Atwood, D. B. Weatherly, T. Minning, Becky M. Bundy +4 more
2005Science390 citations
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Galacturonosyltransferase (GAUT)1 and GAUT7 are the core of a plant cell wall pectin biosynthetic homogalacturonan:galacturonosyltransferase complex
Melani A. Atmodjo, Y. Sakuragi, Xiang Zhu, Amy Burrell +5 more
2011Proceedings of the National Academy of Sciences of the United States of America243 citations Open access
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A Heuristic Method for Assigning a False-discovery Rate for Protein Identifications from Mascot Database Search Results *
D. B. Weatherly, J. Atwood, T. Minning, C. Cavola +2 more
2005Molecular & Cellular Proteomics207 citations Open access
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Tools for glycoproteomic analysis: size exclusion chromatography facilitates identification of tryptic glycopeptides with N-linked glycosylation sites.
G. Álvarez-Manilla, J. Atwood, Yan Guo, N. Warren +2 more
2006Journal of Proteome Research185 citations
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Tools for glycomics: relative quantitation of glycans by isotopic permethylation using 13CH3I.
G. Álvarez-Manilla, N. Warren, T. Abney, J. Atwood +4 more
2007Glycobiology154 citations Open access
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Quantitation by isobaric labeling: applications to glycomics.
J. Atwood, Lei Cheng, G. Álvarez-Manilla, N. Warren +2 more
2008Journal of Proteome Research140 citations
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The steady-state transcriptome of the four major life-cycle stages of Trypanosoma cruzi
T. Minning, D. B. Weatherly, J. Atwood, R. Orlando +1 more
2009BMC Genomics138 citations Open access
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Comparative proteomic analysis of Botrytis cinerea secretome.
Punit Shah, J. Atwood, R. Orlando, Hind El Mubarek +2 more
2009Journal of Proteome Research115 citations
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IDAWG: Metabolic incorporation of stable isotope labels for quantitative glycomics of cultured cells
R. Orlando, Jae-Min Lim, J. Atwood, P. Angel +9 more
2009Journal of Proteome Research115 citations Open access
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Identification of Contractile Vacuole Proteins in Trypanosoma cruzi
P. Ulrich, V. Jimenez, Miyoung Park, V. P. Martins +8 more
2011PLoS ONE87 citations Open access
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Glycoproteomics of Trypanosoma cruzi trypomastigotes using subcellular fractionation, lectin affinity, and stable isotope labeling.
J. Atwood, T. Minning, Fernanda Ludolf, Arthur Nuccio +4 more
2006Journal of Proteome Research72 citations
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Up-regulation of NG2 proteoglycan and interferon-induced transmembrane proteins 1 and 3 in mouse astrocytoma: a membrane proteomics approach.
N. Seyfried, L. Huysentruyt, J. Atwood, Qiang-Wei Xia +2 more
2008Cancer Letters67 citations Open access
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Glycoproteomic analysis of embryonic stem cells: identification of potential glycobiomarkers using lectin affinity chromatography of glycopeptides
G. Álvarez-Manilla, N. Warren, J. Atwood, R. Orlando +2 more
2010Journal of Proteome Research58 citations Open access
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Quantification by isobaric labeling (QUIBL) for the comparative glycomic study of O-linked glycans
J. C. Botelho, J. Atwood, Lei Cheng, G. Álvarez-Manilla +2 more
200834 citations
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Segmentation of precursor mass range using ‘tiling’ approach increases peptide identifications for MS1-based label-free quantification
Catherine E. Vincent, Gregory K. Potts, Arne Ulbrich, Michael S. Westphall +3 more
2013Analytical Chemistry15 citations Open access
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Simple modification of a protein database for mass spectral identification of N-linked glycopeptides.
J. Atwood, S. Sahoo, G. Álvarez-Manilla, D. B. Weatherly +3 more
2005Rapid Communications in Mass Spectrometry15 citations
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Fourier transform mass spectrometry to monitor hyaluronan-protein interactions: use of hydrogen/deuterium amide exchange.
N. Seyfried, J. Atwood, Austin B. Yongye, Andrew Almond +3 more
2007Rapid Communications in Mass Spectrometry14 citations Open access
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Identification of in vivo released products of Onchocerca with diagnostic potential, and characterization of a dominant member, the OV1CF intermediate filament.
F. Cho-Ngwa, Xiang Zhu, Jonathan A. Metuge, A. Daggfeldt +4 more
2011Infection, Genetics and Evolution8 citations
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Identification of Antigenic Brugia Adult Worm Proteins by Peptide Mass Fingerprinting
Tiffany Weinkopff, J. Atwood, G. Punkosdy, D. Moss +3 more
2009Journal of Parasitology6 citations
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Systems for Mechanical Sample Lysis and Homogenization for Molecular Biology Applications
J. Atwood
20164 citations
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Post-translational modifications of recombinant B. cinerea EPG 6.
M. Xie, G. H. Krooshof, J. Benen, J. Atwood +3 more
2005Rapid Communications in Mass Spectrometry4 citations Open access
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A proposed method of sample preparation and homogenization of hemp for the molecular analysis of cannabinoids
Zachary P. Morehouse, Gabriella L. Ryan, Caleb M. Proctor, Akelachi Okparanta +10 more
2020SN Applied Sciences3 citations Open access
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Evaluating the effect of formalin fixation on mass spectrometry‐based proteomic profiling (984.1)
J. Atwood, Drexel A. Neumann, E. Dammer, D. Duong +2 more
20143 citations
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Synthesis of the plant cell wallˈs most complex glycan: pectin ‐ surprises in glycosyltransferase processing and anchoring in the Golgi
D. Mohnen, Melani A. Atmodjo, L. Tan, Rob Amos +6 more
20123 citations
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Are Enzymes Required for the Extraction and Isolation of DNA in Conjunction with Mechanical Homogenization?
Brandon A. Easparro, Shari Garrett, J. Atwood
2016The FASEB Journal1 citations Open access
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Evaluation of Sample Disruption Techniques for High Throughput Extraction of Subcellular Organelles
Shari Garrett, J. Atwood
20150 citations
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Evaluation of mRNA extraction methods from murine skin (776.4)
Drexel A. Neumann, J. Atwood, T. Nasti, Y. Tsuruta +2 more
20140 citations
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Evaluating Protein Degradation Products as Serum Biomarkers to Determine the Invasiveness of Breast Carcinoma.
J. Atwood, C. Shriver, B. Seth, D. Kirchner +3 more
20100 citations
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The Effects of Mass Accuracy on the Validation of MS/MS Data.
R. Orlando, Jae-Min Lim, G. Zohrabyan, J. Atwood +2 more
20100 citations
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Proteomic comparisons of differentiating embryonic stem cells, an in vitro model of embryogenesis
R. Orlando, P. Angel, D. B. Weatherly, J. Atwood
20090 citations
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P40-S Isobaric Labeling for Comparative Glycomics
R. Orlando, J. Atwood, Lei Cheng, W. York
20070 citations
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Functional proteomics and bioinformatics to monitor gene expression, identify vaccine targets, and discover novel biochemical pathways in Trypanosoma cruzi
J. Atwood
20050 citations
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T. Minning

×4

R. Tarleton×4

N. Warren×4

M. Pierce×4

Lei Cheng×3

C. Cavola×2

Melani A. Atmodjo×2

Y. Sakuragi×2