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Wen-Han Zhu · SciRah

Researcher profile · Semantic Scholar

Wen-Han Zhu

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Wen-Han Zhu — researcher profile on SciRah

h-index: 25
Works: 50
Citations: 4,687

Most-cited papers

Ab initio gene identification in metagenomic sequences
Wen-Han Zhu, A. Lomsadze, M. Borodovsky
2010Nucleic Acids Research1,663 citations Open access
Semantic Scholar
Precision editing of the gut microbiota ameliorates colitis
Wen-Han Zhu, Maria G. Winter, Mariana Byndloss, Luisella Spiga +16 more
2018Nature497 citations Open access
Semantic Scholar
Microbial respiration and formate oxidation as metabolic signatures of inflammation-associated dysbiosis
Elizabeth R. Hughes, Maria G. Winter, B. Duerkop, Luisella Spiga +10 more
2017Cell Host and Microbe322 citations Open access
Semantic Scholar
Comprehensive Identification of Protein Substrates of the Dot/Icm Type IV Transporter of Legionella pneumophila
Wen-Han Zhu, Simran Banga, Yun-Hao Tan, Cheng Zheng +3 more
2011PLoS ONE307 citations Open access
Semantic Scholar
Dysbiosis-associated change in host metabolism generates lactate to support Salmonella growth
Caroline C. Gillis, Elizabeth R. Hughes, Luisella Spiga, Maria G. Winter +7 more
2017Cell Host and Microbe228 citations Open access
Semantic Scholar
Type VI Secretion System Transports Zn2+ to Combat Multiple Stresses and Host Immunity
Tie-Tao Wang, Mei-Ru Si, Yun-Hong Song, Wen-Han Zhu +7 more
2015PLoS Pathogens196 citations Open access
Semantic Scholar
An oxidative central metabolism enables Salmonella to utilize microbiota-derived succinate
Luisella Spiga, Maria G. Winter, T. F. de Carvalho, Wen-Han Zhu +10 more
2017Cell Host and Microbe166 citations Open access
Semantic Scholar
Murine colitis reveals a disease-associated bacteriophage community
B. Duerkop, M. Kleiner, D. Páez-Espino, Wen-Han Zhu +5 more
2018Nature Microbiology150 citations Open access
Semantic Scholar
Structural basis for substrate recognition by a unique Legionella phosphoinositide phosphatase
F. Hsu, Wen-Han Zhu, L. Brennan, L. Tao +2 more
2012Proceedings of the National Academy of Sciences of the United States of America117 citations Open access
Semantic Scholar
Editing of the gut microbiota reduces carcinogenesis in mouse models of colitis-associated colorectal cancer
Wen-Han Zhu, N. Miyata, Maria G. Winter, A. Arenales +10 more
2019Journal of Experimental Medicine113 citations Open access
Semantic Scholar
Xenosiderophore utilization promotes Bacteroides thetaiotaomicron resilience during colitis
Wen-Han Zhu, Maria G. Winter, Luisella Spiga, Elizabeth R. Hughes +10 more
2020Cell Host and Microbe97 citations Open access
Semantic Scholar
Epithelial-derived reactive oxygen species enable AppBCX-mediated aerobic respiration of Escherichia coli during intestinal inflammation
Rachael B. Chanin, Maria G. Winter, Luisella Spiga, Elizabeth R. Hughes +9 more
2020Cell Host and Microbe81 citations Open access
Semantic Scholar
Formic acid induces Yca1p-independent apoptosis-like cell death in the yeast Saccharomyces cerevisiae.
Lin Du, Ying-Ying Su, Dong-Qing Sun, Wen-Han Zhu +4 more
2008FEMS Yeast Research63 citations Open access
Semantic Scholar
l-Arginine sensing regulates virulence gene expression and disease progression in enteric pathogens
Zélia Menezes-Garcia, A. Kumar, Wen-Han Zhu, Sebastian E. Winter +1 more
2020Proceedings of the National Academy of Sciences of the United States of America60 citations Open access
Semantic Scholar
Bacillus anthracis genome organization in light of whole transcriptome sequencing
Jeffrey A. Martin, Wen-Han Zhu, Karla D. Passalacqua, N. Bergman +1 more
2010BMC Bioinformatics59 citations Open access
Semantic Scholar
A Legionella Effector Disrupts Host Cytoskeletal Structure by Cleaving Actin
Yao Liu, Wen-Han Zhu, Yun-Hao Tan, E. Nakayasu +2 more
2017PLoS Pathogens57 citations Open access
Semantic Scholar
Endocannabinoids Inhibit the Induction of Virulence in Enteric Pathogens
Melissa Ellermann, A. Pacheco, A. G. Jimenez, Regan M. Russell +9 more
2020Cell54 citations Open access
Semantic Scholar
Induction of caspase 3 activation by multiple L. pneumophila Dot/Icm substrates
Wen-Han Zhu, Loubna A. Hammad, F. Hsu, Yu-Xin Mao +1 more
2013Cellular Microbiology54 citations Open access
Semantic Scholar
Gene discovery in EST sequences from the wheat leaf rust fungus Puccinia triticina sexual spores, asexual spores and haustoria, compared to other rust and corn smut fungi
Junhuan Xu, R. Linning, J. Fellers, M. Dickinson +16 more
2011BMC Genomics51 citations Open access
Semantic Scholar
Colonocyte-derived lactate promotes E. coli fitness in the context of inflammation-associated gut microbiota dysbiosis
Savannah J Taylor, Maria G. Winter, Caroline C. Gillis, L. D. da Silva +11 more
2022Microbiome50 citations Open access
Semantic Scholar
Dysbiosis-Associated Change in Host Metabolism Generates Lactate to Support Salmonella Growth
Caroline C. Gillis, Elizabeth R. Hughes, Luisella Spiga, Maria G. Winter +7 more
2018Cell Host and Microbe48 citations Open access
Semantic Scholar
STAT2 dependent Type I Interferon response promotes dysbiosis and luminal expansion of the enteric pathogen Salmonella Typhimurium
R. Wilson, Sarah A. Tursi, Glenn J. Rapsinski, Nicole J Medeiros +10 more
2019PLoS Pathogens34 citations Open access
Semantic Scholar
Host-Derived Metabolites Modulate Transcription of Salmonella Genes Involved in l-Lactate Utilization during Gut Colonization
Caroline C. Gillis, Maria G. Winter, Rachael B. Chanin, Wen-Han Zhu +2 more
2019Infection and Immunity32 citations Open access
Semantic Scholar
Rosmarinic acid exerts an antagonistic effect on nonalcoholic fatty liver disease by regulating the YAP1/TAZ‐PPARγ/PGC‐1α signaling pathway
Chunxu Luo, Hui-Jun Sun, Jin-Yong Peng, Cong Gao +5 more
2020Phytotherapy Research31 citations
Semantic Scholar
Sensing Cytosolic RpsL by Macrophages Induces Lysosomal Cell Death and Termination of Bacterial Infection
Wen-Han Zhu, L. Tao, M. Quick, J. Joyce +2 more
2015PLoS Pathogens25 citations Open access
Semantic Scholar
Reshaping of bacterial molecular hydrogen metabolism contributes to the outgrowth of commensal E. coli during gut inflammation
Elizabeth R. Hughes, Maria G. Winter, Laice Alves da Silva, Matthew K. Muramatsu +7 more
2021eLife17 citations Open access
Semantic Scholar
Microbial Sensing by Intestinal Myeloid Cells Controls Carcinogenesis and Epithelial Differentiation
N. Miyata, Lindsey L. Morris, Qing Chen, C. Thorne +15 more
2018Cell Reports17 citations Open access
Semantic Scholar
Iron acquisition by a commensal bacterium modifies host nutritional immunity during Salmonella infection
Luisella Spiga, Ryan T. Fansler, Y. R. Perera, Nicolas G. Shealy +13 more
2023bioRxiv15 citations Open access
Semantic Scholar
Systemic exposure to bacterial amyloid curli alters the gut mucosal immune response and the microbiome, exacerbating Salmonella-induced arthritis
Shingo Bessho, Kaitlyn Grando, K. Kyrylchuk, Amanda L. Miller +5 more
2023Gut microbes15 citations Open access
Semantic Scholar
Transition metals and host-microbe interactions in the inflamed intestine
Wen-Han Zhu, Luisella Spiga, Sebastian E. Winter
2019Biometals15 citations Open access
Semantic Scholar
Induction of Rapid Cell Death by an Environmental Isolate of Legionella pneumophila in Mouse Macrophages
L. Tao, Wen-Han Zhu, Bi-Jie Hu, J. Qu +1 more
2013Infection and Immunity13 citations Open access
Semantic Scholar
Assessing lake health in China: Challenges due to multiple coexisting standards
Yi-Fan Su, Zi-Wu Fan, Li Gan, Yunda Li +7 more
2023Journal of Hydrology: Regional Studies11 citations Open access
Semantic Scholar
A novel indicator for defining plain urban river network cyanobacterial blooms: resource use efficiency
Yi-Fan Su, Lin Gan, Yunda Li, Zi-Wu Fan +10 more
2022Heliyon7 citations Open access
Semantic Scholar
Aging-associated dysbiosis increases susceptibility to enteric viral infection in Drosophila
C. Sansone, Jonathan Cohen, Beth Gold, Wen-Han Zhu +4 more
2017bioRxiv5 citations Open access
Semantic Scholar
Improvement of ab initio methods of gene prediction in genomic and metagenomic sequences
Wen-Han Zhu
20105 citations
Semantic Scholar
Special Topic: Mechanism of Bacterial Pathogenesis Cell Biology and Immunology Lessons Taught by Legionella Pneumophila Legionella and the Dot/icm Type Iv Secretion System
Wen-Han Zhu, Zhao-Qing, Luo
5 citations
Semantic Scholar
Taxonomic and Metagenomic Analyses Define the Development of the Microbiota in the Chick
L. Bogomolnaya, Marissa Talamantes, J. Rocha, Aravindhan Nagarajan +7 more
2022bioRxiv4 citations Open access
Semantic Scholar
Methods for Determining Protein Translocation by the Legionella pneumophila Dot/Icm Type IV Secretion System
Wen-Han Zhu, Zhao-Qing Luo
2013Methods in molecular biology4 citations Open access
Semantic Scholar
Mind the Gap: Bridging the Divide from Sequencing Data to Empiric Phenotypes in the Human Gut Microbiota
Ryan T. Fansler, Wen-Han Zhu
2022mSystems2 citations Open access
Semantic Scholar
A new way to detect the danger: Lysosomal cell death induced by a bacterial ribosomal protein
Wen-Han Zhu, Zhao-Qing Luo
2015Journal of nature and science2 citations
Semantic Scholar
Assessment of Gene Annotation Accuracy by Inferring Transcripts from RNA-Seq
Jeffrey A. Martin, Wen-Han Zhu, N. Bergman, M. Borodovsky
2009IEEE International Conference on Bioinformatics and Biomedicine2 citations
Semantic Scholar
Respire or expire—precision killing of Helicobacter pylori by targeting complex I respiration
Ryan T. Fansler, Luisella Spiga, M. Langford, Wen-Han Zhu
2023Cell Chemical Biology0 citations Open access
Semantic Scholar
Structure and binding of an exogenous siderophore by a receptor protein in a gut commensal bacterium
Y. R. Perera, Brian Ferrer, Wen-Han Zhu, W. Chazin
2022Biophysical Journal0 citations Open access
Semantic Scholar
Cleavage by RavK inhibits actin polymerization.
Yao Liu, Wen-Han Zhu, Yun-Hao Tan, S. NakayasuErnesto +2 more
20170 citations Open access
Semantic Scholar
Identification of L. pneumophila Dot/Icm substrates capable of altering the architecture of the actin cytoskeleton of mammalian cells.
Yao Liu, Wen-Han Zhu, Yun-Hao Tan, S. NakayasuErnesto +2 more
20170 citations Open access
Semantic Scholar
The cleavage of actin by RavK.
Yao Liu, Wen-Han Zhu, Yun-Hao Tan, S. NakayasuErnesto +2 more
20170 citations Open access
Semantic Scholar
Legionella pneumophilaが教える細胞生物学および免疫学の教訓【Powered by NICT】
Wen-Han Zhu, Zhao-Qing Luo
20160 citations
Semantic Scholar
331 Intestinal Dysbiosis and Susceptibility to Colonic Neoplasia Are Controlled by Myeloid Cell Intrinsic Factors
N. Miyata, Wen-Han Zhu, Hai-Ying Li, Kayci Huff-Hardy +6 more
20160 citations
Semantic Scholar
Host cell death in Legionella pneumophila pathogenesis and immunity
Wen-Han Zhu
20140 citations
Semantic Scholar
Subversion of Host Defences by Microbes
M. Rhen, S. Normark, M. Hornef, Wen-Han Zhu +1 more
20090 citations
Semantic Scholar

Frequent co-authors

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Sebastian E. Winter×20
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Sebastian E. Winter — researcher profile on SciRah
Luisella Spiga×15
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Luisella Spiga — researcher profile on SciRah
Zhao-Qing Luo×14
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Zhao-Qing Luo — researcher profile on SciRah
Maria G. Winter×13
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Maria G. Winter — researcher profile on SciRah

Elizabeth R. Hughes×9

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Elizabeth R. Hughes — researcher profile on SciRah

Caroline C. Gillis×9

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Caroline C. Gillis — researcher profile on SciRah

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Rachael B. Chanin×7

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Rachael B. Chanin — researcher profile on SciRah

Cassie L. Behrendt×6

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L. Hooper — researcher profile on SciRah

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Yun-Hao Tan — researcher profile on SciRah

M. Borodovsky×4

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M. Borodovsky — researcher profile on SciRah