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Valer Gotea · SciRah

Researcher profile · Semantic Scholar

Valer Gotea

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Valer Gotea — researcher profile on SciRah

h-index: 17
Works: 32
Citations: 1,255

Most-cited papers

Homotypic clusters of transcription factor binding sites are a key component of human promoters and enhancers.
Valer Gotea, A. Visel, John M Westlund, Marcelo Araujo da Nóbrega +2 more
2010Genome Research249 citations Open access
Semantic Scholar
Whole-genome sequencing identifies a recurrent functional synonymous mutation in melanoma
Jared J. Gartner, S. Parker, Todd D. Prickett, K. Dutton-Regester +59 more
2013Proceedings of the National Academy of Sciences of the United States of America165 citations Open access
Semantic Scholar
Transposable elements as a significant source of transcription regulating signals.
Bartley G Thornburg, Valer Gotea, W. Makałowski
2006Gene151 citations
Semantic Scholar
Do transposable elements really contribute to proteomes?
Valer Gotea, W. Makałowski
2006Trends in Genetics97 citations
Semantic Scholar
Transposable Elements: Classification, Identification, and Their Use As a Tool For Comparative Genomics.
W. Makałowski, Valer Gotea, A. Pande, I. Makałowska
2019Methods in molecular biology86 citations Open access
Semantic Scholar
Recurrent patterns of DNA methylation in the ZNF154, CASP8, and VHL promoters across a wide spectrum of human solid epithelial tumors and cancer cell lines
Francisco Sánchez-Vega, Valer Gotea, H. Petrykowska, G. Margolin +4 more
2013Epigenetics56 citations Open access
Semantic Scholar
The functional relevance of somatic synonymous mutations in melanoma and other cancers
Valer Gotea, Jared J. Gartner, N. Qutob, L. Elnitski +1 more
2015Pigment Cell & Melanoma Research50 citations Open access
Semantic Scholar
Pan-cancer stratification of solid human epithelial tumors and cancer cell lines reveals commonalities and tissue-specific features of the CpG island methylator phenotype
Francisco Sánchez-Vega, Valer Gotea, G. Margolin, L. Elnitski
2015Epigenetics & Chromatin49 citations Open access
Semantic Scholar
Significant associations between driver gene mutations and DNA methylation alterations across many cancer types
Yun-Ching Chen, Valer Gotea, G. Margolin, L. Elnitski
2017bioRxiv47 citations Open access
Semantic Scholar
Spliceosomal small nuclear RNA genes in 11 insect genomes.
Stephen M. Mount, Valer Gotea, Chiao-Feng Lin, Kristina Hernandez +1 more
2006RNA: A publication of the RNA Society44 citations Open access
Semantic Scholar
Tissue-Specific and Ubiquitous Expression Patterns from Alternative Promoters of Human Genes
E. Jacox, Valer Gotea, I. Ovcharenko, L. Elnitski
2010PLoS ONE37 citations Open access
Semantic Scholar
Transposable elements and their identification.
W. Makałowski, A. Pande, Valer Gotea, I. Makałowska
2012Methods in molecular biology34 citations
Semantic Scholar
Mastering seeds for genomic size nucleotide BLAST searches.
Valer Gotea, V. Veeramachaneni, W. Makałowski
2003Nucleic Acids Research32 citations Open access
Semantic Scholar
Bidirectional Promoters as Important Drivers for the Emergence of Species-Specific Transcripts
Valer Gotea, H. Petrykowska, L. Elnitski
2013PLoS ONE29 citations Open access
Semantic Scholar
Genome-wide detection of a TFIID localization element from an initial human disease mutation
Mary Yang, K. Laflamme, Valer Gotea, C. Joiner +9 more
2010Nucleic Acids Research25 citations Open access
Semantic Scholar
Assessing predictions of the impact of variants on splicing in CAGI5
Stephen M. Mount, Žiga Avsec, L. Carmel, R. Casadio +18 more
2019Human Mutation18 citations Open access
Semantic Scholar
Functional analysis of synonymous substitutions predicted to affect splicing of the CFTR gene
A. Scott, H. Petrykowska, T. Hefferon, Valer Gotea +1 more
2012Journal of Cystic Fibrosis18 citations Open access
Semantic Scholar
CpG island methylator phenotype in adenocarcinomas from the digestive tract: Methods, conclusions, and controversies
Francisco Sánchez-Vega, Valer Gotea, Yun-Ching Chen, L. Elnitski
2017World Journal of Gastrointestinal Oncology15 citations Open access
Semantic Scholar
A Case of IL-7R Deficiency Caused by a Novel Synonymous Mutation and Implications for Mutation Screening in SCID Diagnosis
Fernando Gallego-Bustos, Valer Gotea, J. Ramos-Amador, R. Rodríguez‐Pena +7 more
2016Frontiers in Immunology14 citations Open access
Semantic Scholar
Differential gene expression identifies a transcriptional regulatory network involving ER-alpha and PITX1 in invasive epithelial ovarian cancer
Yichao Li, S. Jaiswal, Rupleen Kaur, D. Alsaadi +8 more
2021BMC Cancer12 citations Open access
Semantic Scholar
Characterization and clustering of kinase isoform expression in metastatic melanoma
David O. Holland, Valer Gotea, Kevin Fedkenheuer, S. Jaiswal +4 more
2021bioRxiv8 citations Open access
Semantic Scholar
A novel role for nucleolin in splice site selection
K. Shefer, Ayub Boulos, Valer Gotea, Maram Arafat +7 more
2020bioRxiv8 citations Open access
Semantic Scholar
The Megacomplex protects ER-alpha from degradation by Fulvestrant in epithelial ovarian cancer
S. Jaiswal, Kevin Fedkenheuer, Ronak Khamar, Hua Tan +8 more
2024Cancer Letters5 citations Open access
Semantic Scholar
Ascertaining regions affected by GC-biased gene conversion through weak-to-strong mutational hotspots
Valer Gotea, L. Elnitski
2014Genomics4 citations Open access
Semantic Scholar
Human Mutation
Valer Gotea, G. Margolin, L. Elnitski
20193 citations
Semantic Scholar
SoMAS: Finding somatic mutations associated with alternative splicing in human cancers
Hua-Yan Tan, Valer Gotea, N. E. Seidel, David O. Holland +4 more
2023bioRxiv1 citations Open access
Semantic Scholar
Haplotype‐Based Analysis of OCA2 Variants in Oculocutaneous Albinism
Meredith F. Gillis, Madeleine R. Ames, L. Lundh, Valer Gotea +10 more
2026Pigment Cell & Melanoma Research0 citations Open access
Semantic Scholar
iSoMAs: Finding isoform expression and somatic mutation associations in human cancers
Hua Tan, Valer Gotea, S. Jaiswal, N. E. Seidel +5 more
2025PLoS Comput. Biol.0 citations Open access
Semantic Scholar
Identification of RNA binding proteins that mediate a quality control mechanism of splicing
Maram Arafat, Valer Gotea, M. I. Umar, Aya Muharram +6 more
2025bioRxiv0 citations Open access
Semantic Scholar
Abstract 2003: Chromatin based targeting of a master regulatory complex in estrogen receptor epithelial ovarian cancer
S. Jaiswal, Kevin Fedkenheuer, Ronak Khamar, Hua Tan +4 more
2024Cancer Research0 citations
Semantic Scholar
Abstract 2137: Differential gene expression identifies a transcriptional regulatory network involving ESR1and PITX1 in invasive epithelial ovarian cancer
Yichao Li, S. Jaiswal, Rupleen Kaur, D. Alsaadi +8 more
2021Molecular and Cellular Biology/Genetics0 citations
Semantic Scholar
CONTRIBUTION OF TRANSPOSABLE ELEMENTS TO GENOMIC NOVELTY: A COMPUTATIONAL APPROACH
Valer Gotea
20070 citations
Semantic Scholar

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