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D. Bodine · SciRah

Researcher profile · Semantic Scholar

D. Bodine

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D. Bodine — researcher profile on SciRah

h-index: 59
Works: 298
Citations: 20K

Most-cited papers

Lineage and species-specific long noncoding RNAs during erythro-megakaryocytic development.
V. Paralkar, Tejaswini Mishra, Jing Luan, Yu Yao +13 more
2014Blood168 citations Open access
Semantic Scholar
Single-Cell Analyses Reveal Megakaryocyte-Biased Hematopoiesis in Myelofibrosis and Identify Mutant Clone-Specific Targets
B. Psaila, Guan-Lin Wang, A. Rodriguez-Meira, Rong Li +17 more
2020Molecules and Cells157 citations Open access
Semantic Scholar
Single-cell profiling of human megakaryocyte-erythroid progenitors identifies distinct megakaryocyte and erythroid differentiation pathways
B. Psaila, Nikolaos Barkas, Deena Iskander, A. Roy +9 more
2016Genome Biology146 citations Open access
Semantic Scholar
Ribosomal protein gene deletions in Diamond-Blackfan anemia.
J. Farrar, A. Vlachos, E. Atsidaftos, Hannah Carlson-Donohoe +5 more
2011Blood138 citations Open access
Semantic Scholar
Genome-wide ChIP-Seq reveals a dramatic shift in the binding of the transcription factor erythroid Kruppel-like factor during erythrocyte differentiation.
A. M. Pilon, S. Ajay, S. Kumar, Laurie A. Steiner +8 more
2011Blood112 citations Open access
Semantic Scholar
Genome-wide DNA methylation profiles in hematopoietic stem and progenitor cells reveal overrepresentation of ETS transcription factor binding sites
Amber Hogart, J. Lichtenberg, S. Ajay, S. Anderson +2 more
2012Genome Research107 citations Open access
Semantic Scholar
Reversible binding of hemoglobin to band 3 constitutes the molecular switch that mediates O2 regulation of erythrocyte properties.
Hai-Yan Chu, M. Mckenna, Nathan A. Krump, Suilan Zheng +5 more
2016Blood85 citations Open access
Semantic Scholar
Transitions in lineage specification and gene regulatory networks in hematopoietic stem/progenitor cells over human development
A. Roy, Guan-Lin Wang, Deena Iskander, S. O'Byrne +13 more
2021Cell Reports65 citations Open access
Semantic Scholar
Exploiting Pre-rRNA Processing in Diamond Blackfan Anemia Gene Discovery and Diagnosis
Jason E. Farrar, P. Quarello, R. Fisher, Kelly A. O'Brien +15 more
2014American journal of hematology/oncology65 citations Open access
Semantic Scholar
“Stripe” transcription factors provide accessibility to co-binding partners in mammalian genomes
Yongbing Zhao, Supriya V. Vartak, A. Conte, Xiang Wang +21 more
2022Molecules and Cells60 citations Open access
Semantic Scholar
Single-cell profiling of human bone marrow progenitors reveals mechanisms of failing erythropoiesis in Diamond-Blackfan anemia
Deena Iskander, Guan-Lin Wang, Elisabeth F. Heuston, C. Christodoulidou +25 more
2021Science Translational Medicine52 citations
Semantic Scholar
Functional Niche Competition Between Normal Hematopoietic Stem and Progenitor Cells and Myeloid Leukemia Cells
C. Glait-Santar, R. Desmond, Xing-Min Feng, T. Bat +7 more
2015Stem Cells49 citations Open access
Semantic Scholar
An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis
Guanjue Xiang, Cheryl A. Keller, Elisabeth F. Heuston, B. Giardine +20 more
2019bioRxiv48 citations Open access
Semantic Scholar
Oxygen tension–mediated erythrocyte membrane interactions regulate cerebral capillary hyperemia
Sitong Zhou, Michael J. Giannetto, James DeCourcey, Hongyi Kang +10 more
2019Science Advances41 citations Open access
Semantic Scholar
The COP9 signalosome is vital for timely repair of DNA double-strand breaks
M. Meir, Y. Galanty, Lior Kashani, M. Blank +13 more
2015Nucleic Acids Research41 citations Open access
Semantic Scholar
Hemozoin produced by mammals confers heme tolerance
Rini H Pek, Xiaojing Yuan, N. Rietzschel, Jianbing Zhang +13 more
2019bioRxiv40 citations Open access
Semantic Scholar
Establishment of regulatory elements during erythro-megakaryopoiesis identifies hematopoietic lineage-commitment points
Elisabeth F. Heuston, Cheryl A. Keller, J. Lichtenberg, B. Giardine +3 more
2018Epigenetics & Chromatin40 citations Open access
Semantic Scholar
Molecular convergence in ex vivo models of Diamond-Blackfan anemia.
Kelly A. O'Brien, J. Farrar, A. Vlachos, S. Anderson +9 more
2017Blood35 citations Open access
Semantic Scholar
The Increased Prevalence of Congenital Heart Disease (CHD) in Children with Diamond Blackfan Anemia (DBA) Suggests Unrecognized DBA as a Cause of CHD in the General Population: A Report of the Diamond Blackfan Anemia Registry
A. Vlachos, D. Osorio, E. Atsidaftos, Jessica Kang +12 more
2018Circulation Genomic and Precision Medicine34 citations Open access
Semantic Scholar
Defective erythropoiesis caused by mutations of the thyroid hormone receptor α gene
Sunmi Park, Cho R. Han, J. Park, Li Zhao +4 more
2017PLoS Genetics33 citations Open access
Semantic Scholar
This information is current as Development Domain 1 Is Essential for Lymphocyte Transcription Factor Zinc Finger and BTB
D. Punwani, Karen L. Simon, Youngnim Choi, A. Dutra +7 more
201229 citations
Semantic Scholar
Sensitive Quantification of Mosaicism Using High Density SNP Arrays and the Cumulative Distribution Function
T. Markello, Hannah Carlson-Donohoe, Murat Sincan, D. Adams +9 more
2011Molecular Genetics and Metabolism23 citations Open access
Semantic Scholar
MRP5 and MRP9 play a concerted role in male reproduction and mitochondrial function
I. Chambers, Praveen Kumar, J. Lichtenberg, Pengcheng Wang +5 more
2021Proceedings of the National Academy of Sciences of the United States of America21 citations Open access
Semantic Scholar
Regulation of erythrocyte Na+/K+/2Cl− cotransport by an oxygen-switched kinase cascade
Suilan Zheng, Nathan A. Krump, M. Mckenna, Yen-Hsing Li +5 more
2018Journal of Biological Chemistry19 citations Open access
Semantic Scholar
Diminutive somatic deletions in the 5q region lead to a phenotype atypical of classical 5q- syndrome.
A. Vlachos, J. Farrar, E. Atsidaftos, Ellen V. Muir +12 more
2013Blood19 citations Open access
Semantic Scholar
Necdin is a breast cancer metastasis suppressor that regulates the transcription of c-Myc
Minnkyong Lee, Sarah M. Beggs, Derek M. Gildea, Sujata Bupp +5 more
2015OncoTarget17 citations Open access
Semantic Scholar
Metastasis-associated Protein Ribosomal RNA Processing 1 Homolog B (RRP1B) Modulates Metastasis Through Regulation of Histone Methylation
Minnkyong Lee, Amy M. Dworkin, J. Lichtenberg, Shashank J. Patel +4 more
2014Molecular Cancer Research17 citations Open access
Semantic Scholar
Normal Iron Homeostasis Requires the Transporter SLC48A1 for Efficient Heme-Iron Recycling in Mammals
William R. Simmons, Lily C. Wain, Joseph S Toker, J. Jagadeesh +4 more
2020Frontiers in Genome Editing15 citations Open access
Semantic Scholar
A tissue-specific chromatin loop activates the erythroid ankyrin-1 promoter.
Ashley O Yocum, Laurie A. Steiner, N. E. Seidel, A. P. Cline +6 more
2012Blood13 citations Open access
Semantic Scholar
Effects of sheared chromatin length on ChIP-seq quality and sensitivity
Cheryl A. Keller, A. Wixom, Elisabeth F. Heuston, B. Giardine +8 more
2020bioRxiv12 citations Open access
Semantic Scholar
Systematic integration of GATA transcription factors and epigenomes via IDEAS paints the regulatory landscape of hematopoietic cells
R. Hardison, Yu Zhang, Cheryl A. Keller, Guanjue Xiang +14 more
2019IUBMB Life - A Journal of the International Union of Biochemistry and Molecular Biology9 citations Open access
Semantic Scholar
Introduction to the review series on transcription factors in hematopoiesis and hematologic disease.
D. Bodine
2017Blood9 citations Open access
Semantic Scholar
An international effort to cure a global health problem: A report on the 19th Hemoglobin Switching Conference
G. Blobel, D. Bodine, M. Brand, J. Crispino +9 more
2015Experimental Hematology8 citations Open access
Semantic Scholar
Interspecies regulatory landscapes and elements revealed by novel joint systematic integration of human and mouse blood cell epigenomes
Guanjue Xiang, Xi He, B. Giardine, Kathryn J. Isaac +30 more
2024Genome Research6 citations
Semantic Scholar
Single-cell analyses reveal aberrant pathways for megakaryocyte-biased hematopoiesis in myelofibrosis and identify mutant clone-specific targets
B. Psaila, Guan-Lin Wang, A. Meira, Elisabeth F. Heuston +14 more
2019bioRxiv6 citations Open access
Semantic Scholar
All hands on DEK.
D. Bodine
2019Journal of Clinical Investigation5 citations Open access
Semantic Scholar
Oligodendrocyte Slc48a1 (Hrg1) encodes a functional heme transporter required for myelin integrity
J. Stockley, Adrien M. Vaquié, Zhao-Yang Xu, Theresa Bartels +16 more
2024Glia4 citations Open access
Semantic Scholar
Cross-species regulatory landscapes and elements revealed by novel joint systematic integration of human and mouse blood cell epigenomes
Guanjue Xiang, Xi He, B. Giardine, Kathryn J. Weaver +36 more
20234 citations
Semantic Scholar
A Single-Cell Approach to Unraveling Abnormal Megakaryocyte Differentiation and Function in Myelofibrosis
B. Psaila, Elisabeth F. Heuston, D. Milojkovic, J. Lichtenberg +7 more
20174 citations
Semantic Scholar
SigSeeker: a peak‐calling ensemble approach for constructing epigenetic signatures
J. Lichtenberg, L. Elnitski, D. Bodine
2017Bioinform.4 citations Open access
Semantic Scholar
Snapshot: a package for clustering and visualizing epigenetic history during cell differentiation
Guanjue Xiang, B. Giardine, Lin An, Chen Sun +7 more
2023BMC Bioinformatics3 citations Open access
Semantic Scholar
AG-946 Normalizes Glycolysis and Improves Red Cell Indices in a Humanized Sickle Cell Mouse Model
R. Jamwal, Lily C. Wain, Christopher Copeland, P. Kosinski +6 more
2022Blood3 citations Open access
Semantic Scholar
Introduction to the review series on "bone marrow failure".
D. Bodine, N. Berliner
2014Blood3 citations
Semantic Scholar
Autosomal Recessive Diamond-Blackfan Anemia: Identification Of Mutations In MCM2 and Flnb
N. E. Seidel, J. Farrar, A. Vlachos, N. Program +8 more
20133 citations
Semantic Scholar
Anemia of inflammation is all the RAGE.
D. Bodine
2022Blood2 citations
Semantic Scholar
SBR-Blood: systems biology repository for hematopoietic cells
J. Lichtenberg, Elisabeth F. Heuston, Tejaswini Mishra, Cheryl A. Keller +2 more
2015Nucleic Acids Res.2 citations Open access
Semantic Scholar
Species-Specific Functions For Long Noncoding RNAs During Erythropoeisis
V. Paralkar, Tejaswini Mishra, Jing Luan, Yu Yao +7 more
20132 citations
Semantic Scholar
A cell-nonautonomous heme acquisition pathway enables erythroid hemoglobinization under stress
A. Belot, Andrew Rock, Sohini Dutt, Gia Haemmerle +5 more
2026bioRxiv1 citations Open access
Semantic Scholar
Transcriptome and chromatin accessibility divergence during differentiation of a bipotential progenitor cell population to erythroblasts and megakaryocytes
Tejaswini Mishra, B. Giardine, Christapher S. Morrissey, Cheryl A. Keller +7 more
2025Journal of Biological Chemistry1 citations
Semantic Scholar
Interspecies regulatory landscapes and elements revealed by novel joint systematic integration of human and mouse blood cell epigenomes
Guanjue Xiang, Xi He, B. Giardine, Kathryn J. Isaac +30 more
2023bioRxiv1 citations Open access
Semantic Scholar

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Elisabeth F. Heuston×17
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Elisabeth F. Heuston — researcher profile on SciRah
J. Lichtenberg×13
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J. Lichtenberg — researcher profile on SciRah
S. Anderson×12
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R. Hardison×10
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R. Hardison — researcher profile on SciRah

Cheryl A. Keller

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Cheryl A. Keller — researcher profile on SciRah

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B. Giardine — researcher profile on SciRah

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A. Vlachos — researcher profile on SciRah

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J. Lipton — researcher profile on SciRah

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B. Psaila — researcher profile on SciRah

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A. Mead — researcher profile on SciRah

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J. Farrar — researcher profile on SciRah

E. Atsidaftos×6

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E. Atsidaftos — researcher profile on SciRah