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Sacha Baginsky · SciRah

Researcher profile · Semantic Scholar

Sacha Baginsky

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Sacha Baginsky — researcher profile on SciRah

h-index: 43
Works: 106
Citations: 6,021

Most-cited papers

Genome-Scale Proteomics Reveals Arabidopsis thaliana Gene Models and Proteome Dynamics
K. Baerenfaller, Jonas Grossmann, Monica A. Grobei, R. Hull +6 more
2008Science528 citations Open access
Semantic Scholar
Large-Scale Arabidopsis Phosphoproteome Profiling Reveals Novel Chloroplast Kinase Substrates and Phosphorylation Networks1[W]
Sonja Reiland, G. Messerli, K. Baerenfaller, B. Gerrits +4 more
2009Plant Physiology485 citations Open access
Semantic Scholar
Identification of a Vacuolar Sucrose Transporter in Barley and Arabidopsis Mesophyll Cells by a Tonoplast Proteomic Approach1
Anne Endler, Stefan Meyer, S. Schelbert, T. Schneider +6 more
2006Plant Physiology326 citations Open access
Semantic Scholar
Tocopherol Cyclase (VTE1) Localization and Vitamin E Accumulation in Chloroplast Plastoglobule Lipoprotein Particles*
Pierre-Alexandre Vidi, M. Kanwischer, Sacha Baginsky, Jotham Austin +4 more
2006Journal of Biological Chemistry317 citations Open access
Semantic Scholar
Identification of cellular interaction partners of the influenza virus ribonucleoprotein complex and polymerase complex using proteomic-based approaches.
Daniel C. Mayer, Kaaweh Molawi, L. Martínez-Sobrido, A. Ghanem +5 more
2007Journal of Proteome Research233 citations Open access
Semantic Scholar
Dynamic Spectrum Quality Assessment and Iterative Computational Analysis of Shotgun Proteomic Data
A. Nesvizhskii, Franz F. Roos, Jonas Grossmann, M. Vogelzang +4 more
2006Molecular & Cellular Proteomics194 citations Open access
Semantic Scholar
Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF)
Sonja Reiland, G. Finazzi, Anne Endler, A. Willig +7 more
2011Proceedings of the National Academy of Sciences of the United States of America161 citations Open access
Semantic Scholar
A Hidden Markov Model for de Novo Peptide Sequencing
Bernd Fischer, Volker Roth, Jonas Grossmann, Sacha Baginsky +4 more
2004Neural Information Processing Systems155 citations
Semantic Scholar
Proteome Dynamics during Plastid Differentiation in Rice1[W]
T. Kleffmann, A. von Zychlinski, Doris Russenberger, Matthias Hirsch-Hoffmann +3 more
2006Plant Physiology136 citations Open access
Semantic Scholar
Proteome Analysis of the Rice Etioplast
A. von Zychlinski, T. Kleffmann, Nandini Krishnamurthy, K. Sjölander +2 more
2005Molecular & Cellular Proteomics112 citations Open access
Semantic Scholar
plprot: a comprehensive proteome database for different plastid types.
T. Kleffmann, Matthias Hirsch-Hoffmann, W. Gruissem, Sacha Baginsky
2006Plant and Cell Physiology110 citations Open access
Semantic Scholar
Plastid Proteomics in Higher Plants: Current State and Future Goals1
K. V. van Wijk, Sacha Baginsky
2011Plant Physiology103 citations Open access
Semantic Scholar
Plastid Proteome Assembly without Toc159: Photosynthetic Protein Import and Accumulation of N-Acetylated Plastid Precursor Proteins[C][W]
S. Bischof, K. Baerenfaller, Thomas Wildhaber, Raphael Troesch +7 more
2011The Plant Cell97 citations Open access
Semantic Scholar
Proteome analysis of bell pepper (Capsicum annuum L.) chromoplasts.
M. A. Siddique, Jonas Grossmann, W. Gruissem, Sacha Baginsky
2006Plant and Cell Physiology91 citations Open access
Semantic Scholar
MASCP Gator: An Aggregation Portal for the Visualization of Arabidopsis Proteomics Data1[C][OA]
H. Joshi, Matthias Hirsch-Hoffmann, K. Baerenfaller, W. Gruissem +18 more
2010Plant Physiology90 citations Open access
Semantic Scholar
Plant proteomics: concepts, applications, and novel strategies for data interpretation.
Sacha Baginsky
2009Mass spectrometry reviews (Print)90 citations
Semantic Scholar
Chloroplast proteomics: potentials and challenges.
Sacha Baginsky, W. Gruissem
2004Journal of Experimental Botany87 citations Open access
Semantic Scholar
Novel Tonoplast Transporters Identified Using a Proteomic Approach with Vacuoles Isolated from Cauliflower Buds1[W][OA]
Ulrike G. Schmidt, Anne Endler, S. Schelbert, A. Brunner +6 more
2007Plant Physiology86 citations Open access
Semantic Scholar
Chloroplast PNPase exists as a homo-multimer enzyme complex that is distinct from the Escherichia coli degradosome.
Sacha Baginsky, A. Shteiman-Kotler, V. Liveanu, Shlomit Yehudai-Resheff +6 more
2001RNA: A publication of the RNA Society85 citations
Semantic Scholar
Jasmonate Controls Polypeptide Patterning in Undamaged Tissue in Wounded Arabidopsis Leaves1[W][OA]
A. Gfeller, K. Baerenfaller, J. Loscos, Aurore Chételat +2 more
2011Plant Physiology82 citations Open access
Semantic Scholar
Arabidopsis thaliana as a model organism for plant proteome research.
S. Wienkoop, Sacha Baginsky, W. Weckwerth
2010Journal of Proteomics79 citations
Semantic Scholar
AUDENS: a tool for automated peptide de novo sequencing.
Jonas Grossmann, Franz F. Roos, Mark Cieliebak, Z. Lipták +4 more
2005Journal of Proteome Research79 citations Open access
Semantic Scholar
Gene Expression Analysis, Proteomics, and Network Discovery1
Sacha Baginsky, L. Hennig, Philip Zimmermann, W. Gruissem
2009Plant Physiology78 citations Open access
Semantic Scholar
Semi-supervised LC/MS alignment for differential proteomics
Bernd Fischer, Jonas Grossmann, Volker Roth, W. Gruissem +2 more
2006Intelligent Systems in Molecular Biology76 citations Open access
Semantic Scholar
Proteome analysis of tobacco bright yellow-2 (BY-2) cell culture plastids as a model for undifferentiated heterotrophic plastids.
Sacha Baginsky, Asima Siddique, W. Gruissem
2004Journal of Proteome Research76 citations
Semantic Scholar
pep2pro: a new tool for comprehensive proteome data analysis to reveal information about organ-specific proteomes in Arabidopsis thaliana.
K. Baerenfaller, Matthias Hirsch-Hoffmann, Julia Svozil, R. Hull +5 more
2011Integrative Biology75 citations
Semantic Scholar
Chloroplast transcription at different light intensities. Glutathione-mediated phosphorylation of the major RNA polymerase involved in redox-regulated organellar gene expression.
Elena Baena-González, Sacha Baginsky, P. Mulo, Holger Summer +2 more
2001Plant Physiology74 citations Open access
Semantic Scholar
The chloroplast kinase network: new insights from large-scale phosphoproteome profiling.
Sacha Baginsky, W. Gruissem
2009Molecular Plant67 citations Open access
Semantic Scholar
Arabidopsis thaliana proteomics: from proteome to genome.
Sacha Baginsky, W. Gruissem
2006Journal of Experimental Botany57 citations Open access
Semantic Scholar
In vivo phosphorylation sites of barley tonoplast proteins identified by a phosphoproteomic approach
Anne Endler, Sonja Reiland, B. Gerrits, Ulrike G. Schmidt +2 more
2009Proteomics56 citations Open access
Semantic Scholar
The Acidic A-Domain of Arabidopsis Toc159 Occurs as a Hyperphosphorylated Protein1[W][OA]
B. Agne, C. Andrés, Cyrille Montandon, B. Christ +6 more
2010Plant Physiology55 citations Open access
Semantic Scholar
Chloroplast-localized BICAT proteins shape stromal calcium signals and are required for efficient photosynthesis.
Julia Frank, Ricardo Happeck, Bastian Meier, Minh Thi Thanh Hoang +6 more
2018New Phytologist54 citations
Semantic Scholar
Protein identification and quantification by data-independent acquisition and multi-parallel collision-induced dissociation mass spectrometry (MS(E)) in the chloroplast stroma proteome.
Stefan Helm, D. Dobritzsch, Anja Rödiger, B. Agne +1 more
2014Journal of Proteomics51 citations
Semantic Scholar
Identification of STN7/STN8 kinase targets reveals connections between electron transport, metabolism and gene expression
Anna Schönberg, Anja Rödiger, Wiebke Mehwald, Johann Galonska +6 more
2017The Plant Journal50 citations Open access
Semantic Scholar
Characterization of Chloroplast Protein Import without Tic56, a Component of the 1-Megadalton Translocon at the Inner Envelope Membrane of Chloroplasts1
Daniela Köhler, Cyrille Montandon, G. Hause, Petra Majovsky +3 more
2015Plant Physiology49 citations Open access
Semantic Scholar
A workflow to increase the detection rate of proteins from unsequenced organisms in high‐throughput proteomics experiments
Jonas Grossmann, Bernd Fischer, K. Baerenfaller, J. Owiti +3 more
2007Proteomics49 citations
Semantic Scholar
NovoHMM: a hidden Markov model for de novo peptide sequencing.
Bernd Fischer, Volker Roth, Franz F. Roos, J. Grossmann +4 more
2005Analytical Chemistry48 citations Open access
Semantic Scholar
High Light-Dependent Phosphorylation of Photosystem II Inner Antenna CP29 in Monocots Is STN7 Independent and Enhances Nonphotochemical Quenching1
Nico Betterle, M. Ballottari, Sacha Baginsky, R. Bassi
2014Plant Physiology45 citations Open access
Semantic Scholar
Analysis of shotgun proteomics and RNA profiling data from Arabidopsis thaliana chloroplasts.
Sacha Baginsky, T. Kleffmann, A. von Zychlinski, W. Gruissem
2005Journal of Proteome Research45 citations
Semantic Scholar
The chloroplast import receptor Toc90 partially restores the accumulation of Toc159 client proteins in the Arabidopsis thaliana ppi2 mutant.
Sibylle Infanger, S. Bischof, A. Hiltbrunner, B. Agne +2 more
2011Molecular Plant42 citations Open access
Semantic Scholar
Synergistic Toxicity of Copper and Gold Compounds in Cupriavidus metallidurans
N. Wiesemann, Lucy Bütof, M. Herzberg, G. Hause +8 more
2017Applied and Environmental Microbiology41 citations Open access
Semantic Scholar
MAPKs Influence Pollen Tube Growth by Controlling the Formation of Phosphatidylinositol 4,5-Bisphosphate in an Apical Plasma Membrane Domain
F. Hempel, I. Stenzel, M. Heilmann, P. Krishnamoorthy +8 more
2017The Plant Cell38 citations Open access
Semantic Scholar
Signal integration by chloroplast phosphorylation networks: an update
Anna Schönberg, Sacha Baginsky
2012Frontiers in Plant Science36 citations Open access
Semantic Scholar
PepSplice: cache-efficient search algorithms for comprehensive identification of tandem mass spectra
Franz F. Roos, Riko Jacob, Jonas Grossmann, Bernd Fischer +4 more
2007Bioinform.35 citations Open access
Semantic Scholar
Importance of Translocon Subunit Tic56 for rRNA Processing and Chloroplast Ribosome Assembly1
Daniela Köhler, Stefan Helm, B. Agne, Sacha Baginsky
2016Plant Physiology31 citations Open access
Semantic Scholar
Endonucleolytic activation directs dark-induced chloroplast mRNA degradation.
Sacha Baginsky, W. Gruissem
2002Nucleic Acids Research31 citations Open access
Semantic Scholar
Chromoplast differentiation in bell pepper (Capsicum annuum) fruits
Anja Rödiger, B. Agne, D. Dobritzsch, Stefan Helm +3 more
2020bioRxiv30 citations Open access
Semantic Scholar
The multinational Arabidopsis steering subcommittee for proteomics assembles the largest proteome database resource for plant systems biology.
W. Weckwerth, Sacha Baginsky, K. V. van Wijk, J. Heazlewood +1 more
2008Journal of Proteome Research30 citations Open access
Semantic Scholar
Protein phosphorylation in chloroplasts - a survey of phosphorylation targets.
Sacha Baginsky
2016Journal of Experimental Botany29 citations Open access
Semantic Scholar
Common and Specific Protein Accumulation Patterns in Different Albino/Pale-Green Mutants Reveals Regulon Organization at the Proteome Level1[W]
R. Motohashi, Anja Rödiger, B. Agne, K. Baerenfaller +1 more
2012Plant Physiology29 citations Open access
Semantic Scholar

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