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Yao-Cheng Lin · SciRah

Researcher profile · Semantic Scholar

Yao-Cheng Lin

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Yao-Cheng Lin — researcher profile on SciRah

h-index: 27
Works: 64
Citations: 7,459

Most-cited papers

The Norway spruce genome sequence and conifer genome evolution
B. Nystedt, N. Street, A. Wetterbom, A. Zuccolo +52 more
2013Nature1,440 citations Open access
Semantic Scholar
Obligate biotrophy features unraveled by the genomic analysis of rust fungi
S. Duplessis, C. Cuomo, Yao-Cheng Lin, A. Aerts +46 more
2011Proceedings of the National Academy of Sciences of the United States of America629 citations Open access
Semantic Scholar
Genome dynamics of the human embryonic kidney 293 lineage in response to cell biology manipulations
Yao-Cheng Lin, M. Boone, L. Meuris, I. Lemmens +12 more
2014Nature Communications547 citations Open access
Semantic Scholar
Genome sequence of the recombinant protein production host Pichia pastoris
Kristof De Schutter, Yao-Cheng Lin, P. Tiels, A. Van Hecke +5 more
2009Nature Biotechnology521 citations Open access
Semantic Scholar
Pan genome of the phytoplankton Emiliania underpins its global distribution
B. Read, Jessica U Kegel, Mary J. Klute, A. Kuo +33 more
2013Nature494 citations Open access
Semantic Scholar
The genome of the seagrass Zostera marina reveals angiosperm adaptation to the sea
J. Olsen, P. Rouzé, B. Verhelst, Yao-Cheng Lin +31 more
2016Nature491 citations Open access
Semantic Scholar
Obligate Biotrophy Features Unraveled by the Genomic Analysis of the Rust Fungi, Melampsora larici-populina and Puccinia graminis f. sp. tritici
S. Duplessis, C. Cuomo, Yao-Cheng Lin, A. Aerts +46 more
2011379 citations Open access
Semantic Scholar
The Rice Annotation Project Database (RAP-DB): 2008 update
Tsuyoshi Tanaka, B. Antonio, S. Kikuchi, T. Matsumoto +87 more
2007Nucleic Acids Res.342 citations Open access
Semantic Scholar
The Apostasia genome and the evolution of orchids
Guo-Qiang Zhang, Ke-Wei Liu, Zhen Li, R. Lohaus +31 more
2017Nature330 citations Open access
Semantic Scholar
The Plant Genome Integrative Explorer Resource: PlantGenIE.org.
David Sundell, Chanaka Mannapperuma, Sergiu Netotea, N. Delhomme +6 more
2015New Phytologist260 citations Open access
Semantic Scholar
Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen.
Å. Olson, A. Aerts, F. Asiegbu, L. Belbahri +49 more
2012New Phytologist257 citations Open access
Semantic Scholar
Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.
T. Itoh, Tsuyoshi Tanaka, R. Barrero, Chisato Yamasaki +91 more
2007Genome Research246 citations Open access
Semantic Scholar
GOLVEN secretory peptides regulate auxin carrier turnover during plant gravitropic responses.
Ryan Whitford, A. Fernandez, R. Tejos, A. C. Pérez +18 more
2012Developmental Cell225 citations Open access
Semantic Scholar
A rice gene activation/knockout mutant resource for high throughput functional genomics
Y. Hsing, C. Chern, Ming-Jen Fan, Po-chang Lu +26 more
2007Plant Molecular Biology214 citations
Semantic Scholar
A comprehensive analysis of genes encoding small secreted proteins identifies candidate effectors in Melampsora larici-populina (poplar leaf rust).
S. Hacquard, D. Joly, Yao-Cheng Lin, É. Tisserant +12 more
2012Molecular Plant-Microbe Interactions140 citations Open access
Semantic Scholar
The biosynthetic gene cluster for sophorolipids: a biotechnological interesting biosurfactant produced by Starmerella bombicola
I. V. Van Bogaert, K. Holvoet, S. Roelants, Bing Li +3 more
2013Molecular Microbiology122 citations
Semantic Scholar
Functional and evolutionary genomic inferences in Populus through genome and population sequencing of American and European aspen
Yao-Cheng Lin, Jing Wang, N. Delhomme, Bastian Schiffthaler +23 more
2018Proceedings of the National Academy of Sciences of the United States of America91 citations Open access
Semantic Scholar
Oil Bodies and Oleosins in Physcomitrella Possess Characteristics Representative of Early Trends in Evolution1[W][OA]
Chien-Yu Huang, Chun-I Chung, Yao-Cheng Lin, Y. Hsing +1 more
2009Plant Physiology85 citations Open access
Semantic Scholar
Expanding the repertoire of secretory peptides controlling root development with comparative genome analysis and functional assays
Sarieh Ghorbani, Yao-Cheng Lin, B. Parizot, A. Fernandez +4 more
2015Journal of Experimental Botany84 citations Open access
Semantic Scholar
Genome-Wide Analysis Reveals Diverged Patterns of Codon Bias, Gene Expression, and Rates of Sequence Evolution in Picea Gene Families
A. De la Torre, Yao-Cheng Lin, Y. Van de Peer, P. Ingvarsson
2015Genome Biology and Evolution60 citations Open access
Semantic Scholar
Title Development and implementation of a highly-multiplexed SNP array for genetic mapping in maritime pine and comparative mapping with loblolly pine
É. Chancerel, C. Lepoittevin, G. Le-Provost, Yao-Cheng Lin +17 more
201160 citations
Semantic Scholar
A rice phenomics study—phenotype scoring and seed propagation of a T-DNA insertion-induced rice mutant population
C. Chern, Ming-Jen Fan, Su-May Yu, Ai-Ling Hour +19 more
2007Plant Molecular Biology56 citations Open access
Semantic Scholar
Systems genetics reveals a transcriptional network associated with susceptibility in the maize–grey leaf spot pathosystem
N. Christie, A. Myburg, F. Joubert, S. Murray +9 more
2017The Plant Journal43 citations Open access
Semantic Scholar
Candida bombicola as a platform organism for the production of tailor‐made biomolecules
S. Roelants, Karen M. J. Saerens, T. Derycke, Bing Li +5 more
2013Biotechnology and Bioengineering43 citations
Semantic Scholar
Serendipitous Meta-Transcriptomics: The Fungal Community of Norway Spruce (Picea abies)
N. Delhomme, G. Sundström, N. Zamani, H. Lantz +8 more
2015PLoS ONE32 citations Open access
Semantic Scholar
Draft genome of Cercospora zeina, Fusarium pininemorale, Hawksworthiomyces lignivorus, Huntiella decipiens and Ophiostoma ips
B. Wingfield, D. Berger, E. Steenkamp, Hye-Jin Lim +19 more
201730 citations Open access
Semantic Scholar
Open access to sequence: Browsing the Pichia pastoris genome
D. Mattanovich, N. Callewaert, P. Rouzé, Yao-Cheng Lin +5 more
2009Microbial Cell Factories29 citations Open access
Semantic Scholar
DNA-free CRISPR-Cas9 gene editing of wild tetraploid tomato Solanum peruvianum using protoplast regeneration
Choun-Sea Lin, Chen-Tran Hsu, Yu-Hsuan Yuan, Po-Xing Zheng +11 more
2022Plant Physiology26 citations Open access
Semantic Scholar
Small RNA profiling in Pinus pinaster reveals the transcriptome of developing seeds and highlights differences between zygotic and somatic embryos
Andreia S. Rodrigues, I. Chaves, B. Costa, Yao-Cheng Lin +4 more
2019Scientific Reports26 citations Open access
Semantic Scholar
Comparative in silico analysis of EST-SSRs in angiosperm and gymnosperm tree genera
S. Ranade, Yao-Cheng Lin, A. Zuccolo, Y. Van de Peer +1 more
2014BMC Plant Biology26 citations Open access
Semantic Scholar
IMA Genome-F 8
B. Wingfield, D. K. Berger, Emma T. Steenkamp, Hye-Jin Lim +19 more
2017IMA Fungus23 citations Open access
Semantic Scholar
Reference genome and comparative genome analysis for the WHO reference strain for Mycobacterium bovis BCG Danish, the present tuberculosis vaccine
K. Borgers, Jheng-Yang Ou, Po-Xing Zheng, P. Tiels +6 more
2019BMC Genomics20 citations Open access
Semantic Scholar
miRNA profiling in leaf and cork tissues of Quercus suber reveals novel miRNAs and tissue-specific expression patterns
I. Chaves, Yao-Cheng Lin, C. Pinto-Ricardo, Y. Van de Peer +1 more
2014Tree Genetics & Genomes16 citations
Semantic Scholar
Comparative Genomic Analysis Uncovered Evolution of Pathogenicity Factors, Horizontal Gene Transfer Events, and Heavy Metal Resistance Traits in Citrus Canker Bacterium Xanthomonas citri subsp. citri
Chien-Jui Huang, Ting-Li Wu, Po-Xing Zheng, Jheng-Yang Ou +2 more
2021Frontiers in Microbiology15 citations Open access
Semantic Scholar
Efficient and Economical Targeted Insertion in Plant Genomes via Protoplast Regeneration
Chen-Tran Hsu, Yu-Hsuan Yuan, Yao-Cheng Lin, Steven Lin +5 more
2021bioRxiv14 citations Open access
Semantic Scholar
Draft Genome Assembly of the False Spider Mite Brevipalpus yothersi
D. Navia, V. Novelli, S. Rombauts, J. Freitas-Astúa +11 more
2019Microbiology Resource Announcements14 citations Open access
Semantic Scholar
A Repetitive Sequence Specific to Oryza Species with BB Genome and Abundant in Oryza punctata Kotschy ex Steud
Yueh-Yun Cheng, Shao-Bin Fang, Yao-Cheng Lin, M. Chung
20077 citations
Semantic Scholar
Fast and Accurate cDNA Mapping and Splice Site Identification
Michaël Vyverman, Dieter De Smedt, Yao-Cheng Lin, L. Sterck +3 more
2014Bioinformatics5 citations Open access
Semantic Scholar
O19-3Genome dynamics of the human embryonic kidney 293 (HEK293) lineage in response to cell biology manipulations
M. Boone, Yao-Cheng Lin, L. Meuris, I. Lemmens +12 more
20145 citations
Semantic Scholar
Detection of SNPs between Tainung 67 and Nipponbare rice cultivars
Ai-Ling Hour, Yao-Cheng Lin, Peining Li, T. Chow +3 more
20075 citations
Semantic Scholar
Comparative in silico analysis of SSRs in coding regions of high confidence predicted genes in Norway spruce (Picea abies) and Loblolly pine (Pinus taeda)
S. Ranade, Yao-Cheng Lin, Y. Van de Peer, M. R. García-Gil
2015BMC Genetics4 citations Open access
Semantic Scholar
DNA-free CRISPR-Cas9 gene editing of tetraploid tomatoes using protoplast regeneration
Chen-Tran Hsu, Yu-Hsuan Yuan, Po-Xing Zheng, Fu-Hui Wu +10 more
2021bioRxiv3 citations Open access
Semantic Scholar
Complete Genome Sequence of Bacillus cereus C1L, a Plant Growth-Promoting Rhizobacterium from the Rhizosphere of Formosa Lily in Taiwan
Chien-Jui Huang, Po-Xing Zheng, Jheng-Yang Ou, Yao-Cheng Lin +1 more
2017Genome Announcements3 citations Open access
Semantic Scholar
Targeted Gene Editing in Plants using CRISPR-Cas9, Single-Stranded DNA Oligonucleotides, and Protoplast Regeneration
Chen-Tran Hsu, Yu-Hsuan Yuan, Yao-Cheng Lin, Steven Lin +6 more
20212 citations
Semantic Scholar
Automatic Leaf Counting Using Improved YOLOv3
Yi-Lin Tu, Wei-Yang Lin, Yao-Cheng Lin
2020International Symposium on Computer, Consumer and Control2 citations
Semantic Scholar
genome annotation of Oryza sativa ssp . japonica and comparative genome analysis with Arabidopsis thaliana The Rice Annotation Project
Naoyuki Yamamoto, Yeisoo Yu, Hao Zhang, Qiang Zhao +87 more
20072 citations
Semantic Scholar
Author Correction: The Apostasia genome and the evolution of orchids
Guo-Qiang Zhang, Ke-Wei Liu, Zhen Li, R. Lohaus +31 more
2020Nature1 citations Open access
Semantic Scholar
Reference genome for the WHO reference strain for Mycobacterium bovis BCG Danish, the present tuberculosis vaccine
K. Borgers, Jheng-Yang Ou, Po-Xing Zheng, P. Tiels +6 more
2019bioRxiv1 citations Open access
Semantic Scholar
Erratum for Navia et al., “Draft Genome Assembly of the False Spider Mite Brevipalpus yothersi”
D. Navia, V. Novelli, S. Rombauts, J. Freitas-Astúa +11 more
2019Microbiology Resource Announcements1 citations Open access
Semantic Scholar
Genome annotation of the flat mite Brevipalpus yothersi Baker (Tenuipalpidae).
V. Novelli, M. A. Nunes, R. D. de Mendonça, J. F. Astúa +5 more
20161 citations
Semantic Scholar

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