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C. Ciofi · SciRah

Researcher profile · Semantic Scholar

C. Ciofi

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C. Ciofi — researcher profile on SciRah

h-index: 36
Works: 129
Citations: 4,027

Most-cited papers

How genomics can help biodiversity conservation.
Kathrin Theissinger, Carlos Fernandes, G. Formenti, I. Bista +27 more
2023Trends in Genetics334 citations Open access
Semantic Scholar
The era of reference genomes in conservation genomics.
G. Formenti, Kathrin Theissinger, Carlos Fernandes, I. Bista +21 more
2022Trends in Ecology & Evolution269 citations Open access
Semantic Scholar
Transcriptome sequencing and microarray development for the Manila clam, Ruditapes philippinarum: genomic tools for environmental monitoring
M. Milan, Alessandro Coppe, R. Reinhardt, L. Cancela +7 more
2011BMC Genomics140 citations Open access
Semantic Scholar
Giant tortoise genomes provide insights into longevity and age-related disease
V. Quesada, Sandra Freitas-Rodríguez, J. Miller, J. Pérez-Silva +31 more
2018Nature Ecology & Evolution108 citations Open access
Semantic Scholar
Genome of the Komodo dragon reveals adaptations in the cardiovascular and chemosensory systems of monitor lizards
Abigail L. Lind, Yvonne Y Y Lai, Y. Mostovoy, Alisha K. Holloway +26 more
2019Nature Ecology & Evolution82 citations Open access
Semantic Scholar
Biodiversity: an atlas of European reference genomes
C. Mazzoni, C. Ciofi, R. Waterhouse
2023Nature75 citations
Semantic Scholar
The European Reference Genome Atlas: piloting a decentralised approach to equitable biodiversity genomics
Ann M. Mc Cartney, G. Formenti, Alice Mouton, D. D. De Panis +199 more
2024bioRxiv68 citations Open access
Semantic Scholar
Lineage fusion in Galápagos giant tortoises
R. Garrick, E. Benavides, M. Russello, Chaz Hyseni +5 more
2014Molecular Ecology68 citations
Semantic Scholar
Demographic status of Komodo dragons populations in Komodo National Park
D. Purwandana, Achmad Ariefiandy, M. Imansyah, Heru Rudiharto +4 more
201460 citations Open access
Semantic Scholar
Can Camera Traps Monitor Komodo Dragons a Large Ectothermic Predator?
Achmad Ariefiandy, D. Purwandana, Aganto Seno, C. Ciofi +1 more
2013PLoS ONE56 citations Open access
Semantic Scholar
When the Rule Becomes the Exception. No Evidence of Gene Flow between Two Zerynthia Cryptic Butterflies Suggests the Emergence of a New Model Group
F. Zinetti, L. Dapporto, A. Vovlas, G. Chelazzi +3 more
2013PLoS ONE53 citations Open access
Semantic Scholar
Genetic rediscovery of an 'extinct' Galápagos giant tortoise species.
R. Garrick, E. Benavides, M. Russello, J. Gibbs +9 more
2012Current Biology53 citations Open access
Semantic Scholar
Life-History and Spatial Determinants of Somatic Growth Dynamics in Komodo Dragon Populations
R. Laver, D. Purwandana, Achmad Ariefiandy, Jeri Imansyah +3 more
2012PLoS ONE51 citations Open access
Semantic Scholar
Stable isotope analysis of trophic niche in two co-occurring native and invasive terrapins, Emys orbicularis and Trachemys scripta elegans
P. Balzani, S. Vizzini, G. Santini, A. Masoni +3 more
2016Biological Invasions50 citations
Semantic Scholar
Conserved sex chromosomes and karyotype evolution in monitor lizards (Varanidae)
A. Iannucci, Marie Altmanová, C. Ciofi, M. Ferguson-Smith +10 more
2019Heredity48 citations Open access
Semantic Scholar
Ecological allometries and niche use dynamics across Komodo dragon ontogeny
D. Purwandana, Achmad Ariefiandy, M. Imansyah, Aganto Seno +3 more
2016SCIENCE NATURE46 citations Open access
Semantic Scholar
Population genetic structure of common bottlenose dolphins (Tursiops truncatus) in the Adriatic Sea and contiguous regions : implications for international conservation
Stefania Gaspari, Draško Holcer, P. Mackelworth, C. Fortuna +8 more
201545 citations
Semantic Scholar
The Rules of Aggression: How Genetic, Chemical and Spatial Factors Affect Intercolony Fights in a Dominant Species, the Mediterranean Acrobat Ant Crematogaster scutellaris
F. Frizzi, C. Ciofi, L. Dapporto, C. Natali +3 more
2015PLoS ONE42 citations Open access
Semantic Scholar
Numerical dispersal simulations and genetics help explain the origin of hawksbill sea turtles in Ascension Island
N. Putman, F. Abreu-Grobois, A. Broderick, C. Ciofi +6 more
201438 citations
Semantic Scholar
Theory, practice, and conservation in the age of genomics: The Galápagos giant tortoise as a case study
Stephen J. Gaughran, M. Quinzin, J. Miller, R. Garrick +6 more
2017bioRxiv36 citations Open access
Semantic Scholar
Exploring the effects of seasonality and chemical pollution on the hepatopancreas transcriptome of the Manila clam
M. Milan, S. Ferraresso, C. Ciofi, G. Chelazzi +5 more
2013Molecular Ecology36 citations
Semantic Scholar
Host‐microbiota interactions shed light on mortality events in the striped venus clam Chamelea gallina
M. Milan, M. Smits, Giulia Dalla Rovere, S. Iori +15 more
2019Molecular Ecology35 citations
Semantic Scholar
Identification of Genetically Important Individuals of the Rediscovered Floreana Galápagos Giant Tortoise (Chelonoidis elephantopus) Provides Founders for Species Restoration Program
J. Miller, M. Quinzin, N. Poulakakis, J. Gibbs +11 more
2017Scientific Reports33 citations Open access
Semantic Scholar
Population structure, genomic diversity and demographic history of Komodo dragons inferred from whole‐genome sequencing
A. Iannucci, A. Benazzo, C. Natali, E. Arida +4 more
2021Molecular Ecology29 citations Open access
Semantic Scholar
A first estimate of sea turtle bycatch in the industrial trawling fishery of Gabon
P. Casale, G. Abitsi, Marie Pierre Aboro, Pierre Didier Agamboue +31 more
2017Biodiversity and Conservation29 citations
Semantic Scholar
Evaluation of three field monitoring-density estimation protocols and their relevance to Komodo dragon conservation
Achmad Ariefiandy, D. Purwandana, Aganto Seno, Marliana Chrismiawati +2 more
2014Biodiversity and Conservation29 citations Open access
Semantic Scholar
Characterization of 13 polymorphic microsatellite loci in the European pine marten Martes martes
C. Natali, Elisa Banchi, C. Ciofi, E. Manzo +2 more
2010Conservation Genetics Resources28 citations
Semantic Scholar
Effects of human activities on Komodo dragons in Komodo National Park
Ardiantiono, T. Jessop, D. Purwandana, C. Ciofi +3 more
2018Biodiversity and Conservation27 citations
Semantic Scholar
A chromosome-level reference genome and pangenome for barn swallow population genomics
Simona Secomandi, G. Gallo, Marcella Sozzoni, A. Iannucci +35 more
2023Cell Reports26 citations Open access
Semantic Scholar
Conservation of Komodo dragons Varanus komodoensis in the Wae Wuul nature reserve, Flores, Indonesia: a multidisciplinary approach
Achmad Ariefiandy, D. Purwandana, C. Natali, M. Imansyah +3 more
201526 citations
Semantic Scholar
Human activities associated with reduced Komodo dragon habitat use and range loss on Flores
Achmad Ariefiandy, D. Purwandana, M. Azmi, S. A. Nasu +3 more
202124 citations
Semantic Scholar
Dispersal of green turtles from Africa's largest rookery assessed through genetic markers
A. R. Patrício, A. Formia, C. Barbosa, A. Broderick +6 more
201724 citations Open access
Semantic Scholar
Exploring mechanisms and origins of reduced dispersal in island Komodo dragons
T. Jessop, Achmad Ariefiandy, D. Purwandana, C. Ciofi +6 more
2018Proceedings of the Royal Society B23 citations Open access
Semantic Scholar
A comprehensive mitochondrial DNA mixed-stock analysis clarifies the composition of loggerhead turtle aggregates in the Adriatic Sea
L. Tolve, P. Casale, A. Formia, L. Garofalo +14 more
201822 citations
Semantic Scholar
Evaluating environmental, demographic and genetic effects on population‐level survival in an island endemic
D. Purwandana, Achmad Ariefiandy, M. Imansyah, C. Ciofi +7 more
201522 citations Open access
Semantic Scholar
Application of molecular genetics and geometric morphometrics to taxonomy and conservation of cave beetles in central Italy
F. Zinetti, L. Dapporto, S. Vanni, P. Magrini +3 more
2013Journal of Insect Conservation21 citations
Semantic Scholar
Identifying island safe havens to prevent the extinction of the World’s largest lizard from global warming
A. Jones, T. Jessop, Achmad Ariefiandy, B. Brook +7 more
2020Ecology and Evolution20 citations Open access
Semantic Scholar
Temporal and spatial dynamics of insular Rusa deer and wild pig populations in Komodo National Park
Achmad Ariefiandy, D. Forsyth, D. Purwandana, Jeri Imansyah +4 more
2016Journal of Mammalogy20 citations Open access
Semantic Scholar
G lobal phylogeography of ridley sea turtles (Lepidochelys spp.): evolution, demography, connectivity, and conservation
S. Vilaça, A. Hahn, E. Naro-Maciel, F. Abreu-Grobois +12 more
2022Conservation Genetics19 citations Open access
Semantic Scholar
Bridging the Gap between Vertebrate Cytogenetics and Genomics with Single-Chromosome Sequencing (ChromSeq)
A. Iannucci, A. Makunin, A. Lisachov, C. Ciofi +3 more
2021Genes19 citations Open access
Semantic Scholar
Detection of an East European wolf haplotype puzzles mitochondrial DNA monomorphism of the Italian wolf population
F. Boggiano, C. Ciofi, L. Boitani, A. Formia +3 more
201317 citations
Semantic Scholar
Development of a multiplex PCR assay for fine‐scale population genetic analysis of the Komodo monitor Varanus komodoensis based on 18 polymorphic microsatellite loci
C. Ciofi, Athanasia C. Tzika, C. Natali, P. C. Watts +3 more
2011Molecular Ecology Resources16 citations Open access
Semantic Scholar
Characterization of microsatellite loci in the European pond turtle Emys orbicularis
C. Ciofi, Athanasia C. Tzika, C. Natali, Guido Chelazzi +2 more
2009Molecular Ecology Resources15 citations
Semantic Scholar
Early detection of rare and elusive endangered species using environmental DNA: a case study for the Eurasian otter and the white-clawed crayfish in northwestern Italy
Lorenzo Ballini, D. Ottonello, Valentina Repetto, C. Natali +5 more
2024Conservation Genetics14 citations Open access
Semantic Scholar
Population genetic structure of Aldabra giant tortoises.
O. Balmer, C. Ciofi, D. Galbraith, I. Swingland +2 more
2011Journal of Heredity14 citations Open access
Semantic Scholar
Isolating Chromosomes of the Komodo Dragon: New Tools for Comparative Mapping and Sequence Assembly
A. Iannucci, Marie Altmanová, C. Ciofi, M. Ferguson-Smith +7 more
2019Cytogenetic and Genome Research13 citations Open access
Semantic Scholar
Serpentine soils affect heavy metal tolerance but not genetic diversity in a common Mediterranean ant.
F. Frizzi, A. Masoni, Mine Çelikkol, E. Palchetti +3 more
2017Chemosphere13 citations
Semantic Scholar
Genetic relatedness affects socio-spatial organization in a solitary carnivore, the European pine marten
P. Bartolommei, S. Gasperini, E. Manzo, C. Natali +2 more
201613 citations
Semantic Scholar
A high-quality reference genome for the critically endangered Aeolian wall lizard, Podarcis raffonei.
Maëva Gabrielli, A. Benazzo, Roberto Biello, L. Ancona +15 more
2023Journal of Heredity12 citations Open access
Semantic Scholar
Long‐lasting effects of chronic exposure to chemical pollution on the hologenome of the Manila clam
M. Iannello, M. Mezzelani, Giulia Dalla Rovere, M. Smits +20 more
2021Evolutionary Applications12 citations Open access
Semantic Scholar

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