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A. Enright · SciRah

Researcher profile · Semantic Scholar

A. Enright

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A. Enright — researcher profile on SciRah

h-index: 68
Works: 152
Citations: 45K

Most-cited papers

The zebrafish reference genome sequence and its relationship to the human genome
K. Howe, Matthew D. Clark, C. Torroja, J. Torrance +173 more
2013Nature4,867 citations Open access
Semantic Scholar
RNA modifications detection by comparative Nanopore direct RNA sequencing
Adrien Léger, Paulo P. Amaral, L. Pandolfini, Charlotte Capitanchik +15 more
2019Nature Communications417 citations Open access
Semantic Scholar
Kraken: A set of tools for quality control and analysis of high-throughput sequence data
Matthew P. Davis, S. van Dongen, Cei Abreu-Goodger, N. Bartonicek +1 more
2013Methods412 citations Open access
Semantic Scholar
The RNA m6A Reader YTHDF2 Is Essential for the Post-transcriptional Regulation of the Maternal Transcriptome and Oocyte Competence
I. Ivanova, Christian Much, M. Di Giacomo, Chiara Azzi +6 more
2017Molecules and Cells359 citations Open access
Semantic Scholar
The endonuclease activity of Mili fuels piRNA amplification that silences LINE1 elements
S. De Fazio, N. Bartonicek, M. Di Giacomo, Cei Abreu-Goodger +6 more
2011Nature349 citations
Semantic Scholar
A high-resolution mRNA expression time course of embryonic development in zebrafish
Richard J. White, J. Collins, I. Sealy, Neha Wali +10 more
2017bioRxiv334 citations Open access
Semantic Scholar
Extracellular Vesicles from Neural Stem Cells Transfer IFN-γ via Ifngr1 to Activate Stat1 Signaling in Target Cells
C. Cossetti, N. Iraci, T. Mercer, T. Leonardi +16 more
2014Molecules and Cells302 citations Open access
Semantic Scholar
MicroRNA-9 Inhibition of Cell Proliferation and Identification of Novel miR-9 Targets by Transcriptome Profiling in Breast Cancer Cells*
S. Selcuklu, M. Donoghue, K. Rehmet, Matheus de Souza Gomes +6 more
2012Journal of Biological Chemistry192 citations Open access
Semantic Scholar
Multiple epigenetic mechanisms and the piRNA pathway enforce LINE1 silencing during adult spermatogenesis.
M. Di Giacomo, S. Comazzetto, H. Saini, S. De Fazio +6 more
2013Molecules and Cells191 citations Open access
Semantic Scholar
Targeted Deletion of MicroRNA-22 Promotes Stress-Induced Cardiac Dilation and Contractile Dysfunction
Priyatansh Gurha, Cei Abreu-Goodger, Tian-Nan Wang, Maricela O. Ramirez +13 more
2012Circulation180 citations Open access
Semantic Scholar
mRNA 3′ uridylation and poly(A) tail length sculpt the mammalian maternal transcriptome
Marcos Morgan, Christian Much, M. DiGiacomo, Chiara Azzi +8 more
2017Nature169 citations Open access
Semantic Scholar
MicroRNA degradation by a conserved target RNA regulates animal behavior
A. Bitetti, A. Mallory, Elisabetta Golini, C. Carrieri +9 more
2018Nature Structural & Molecular Biology168 citations Open access
Semantic Scholar
Integrated analysis of microRNA and mRNA expression and association with HIF binding reveals the complexity of microRNA expression regulation under hypoxia
C. Camps, H. Saini, D. Mole, Hani Choudhry +8 more
2014Molecular Cancer163 citations Open access
Semantic Scholar
Quantitative gene profiling of long noncoding RNAs with targeted RNA sequencing
M. Clark, T. Mercer, G. Bussotti, T. Leonardi +11 more
2015Nature Methods161 citations
Semantic Scholar
spongeScan: A web for detecting microRNA binding elements in lncRNA sequences
Pedro Furió-Tarí, Sonia Tarazona, T. Gabaldón, A. Enright +1 more
2016Nucleic Acids Res.124 citations Open access
Semantic Scholar
Metric distances derived from cosine similarity and Pearson and Spearman correlations
S. van Dongen, A. Enright
2012arXiv.org122 citations
Semantic Scholar
Extracellular vesicles are independent metabolic units with asparaginase activity
N. Iraci, E. Gaude, T. Leonardi, Ana S. H. Costa +12 more
2017Nature Chemical Biology120 citations Open access
Semantic Scholar
An Interferon Regulated MicroRNA Provides Broad Cell-Intrinsic Antiviral Immunity through Multihit Host-Directed Targeting of the Sterol Pathway
Kevin A. Robertson, Wei Y. Hsieh, T. Forster, M. Blanc +18 more
2016PLoS Biology109 citations Open access
Semantic Scholar
Visualizing genome and systems biology: technologies, tools, implementation techniques and trends, past, present and future
G. Pavlopoulos, Dimitris Malliarakis, Nikolas Papanikolaou, Theodosis Theodosiou +2 more
2015GigaScience104 citations Open access
Semantic Scholar
Terminal uridylyltransferases target RNA viruses as part of the innate immune system
J. Le Pen, Hongbing Jiang, T. Di Domenico, E. Kneuss +9 more
2018Nature Structural & Molecular Biology103 citations Open access
Semantic Scholar
Chimira: analysis of small RNA sequencing data and microRNA modifications
Dimitrios M. Vitsios, A. Enright
2015Bioinform.102 citations Open access
Semantic Scholar
MiR-221 Influences Effector Functions and Actin Cytoskeleton in Mast Cells
R. J. Mayoral, L. Deho', Nicole Rusca, N. Bartonicek +3 more
2011PLoS ONE101 citations Open access
Semantic Scholar
Schwann cell reprogramming into repair cells increases miRNA-21 expression in exosomes promoting axonal growth
Rodrigo López-Leal, F. Díaz-Viraqué, Romina J. Catalán, Cristian Saquel +3 more
2020Journal of Cell Science97 citations Open access
Semantic Scholar
The midbody interactome reveals unexpected roles for PP1 phosphatases in cytokinesis
Luisa Capalbo, Zuni I. Bassi, Marco Geymonat, Sofia Todesca +11 more
2019Nature Communications94 citations Open access
Semantic Scholar
Genomic positional conservation identifies topological anchor point (tap)RNAs linked to developmental loci
Paulo P. Amaral, T. Leonardi, N. Han, Emmanuelle Viré +11 more
2016bioRxiv85 citations Open access
Semantic Scholar
RNAcentral: A vision for an international database of RNA sequences.
A. Bateman, Shipra Agrawal, E. Birney, E. Bruford +26 more
2011RNA: A publication of the RNA Society76 citations Open access
Semantic Scholar
LIN28 expression in malignant germ cell tumors down-regulates let-7 and increases oncogene levels
M. Murray, H. Saini, Charlotte A. Siegler, Jennifer E. Hanning +11 more
2013Cancer Research72 citations Open access
Semantic Scholar
MiR-25 Regulates Wwp2 and Fbxw7 and Promotes Reprogramming of Mouse Fibroblast Cells to iPSCs
D. Lu, Matthew P. Davis, Cei Abreu-Goodger, Wei Wang +7 more
2012PLoS ONE72 citations Open access
Semantic Scholar
Solid tumors of childhood display specific serum microRNA profiles
M. Murray, K. Raby, H. Saini, S. Bailey +5 more
2014Cancer Epidemiology, Biomarkers and Prevention71 citations Open access
Semantic Scholar
MapMi: automated mapping of microRNA loci
J. Guerra-Assunção, A. Enright
2010BMC Bioinformatics68 citations Open access
Semantic Scholar
Large-scale analysis of microRNA evolution
J. Guerra-Assunção, A. Enright
2012BMC Genomics65 citations Open access
Semantic Scholar
Mirnovo: genome-free prediction of microRNAs from small RNA sequencing data and single-cells using decision forests
Dimitrios M. Vitsios, Elissavet Kentepozidou, L. Quintais, Èlia Benito-Gutiérrez +3 more
2017Nucleic Acids Research62 citations Open access
Semantic Scholar
A programmed wave of uridylation-primed mRNA degradation is essential for meiotic progression and mammalian spermatogenesis
Marcos Morgan, Y. Kabayama, Christian Much, I. Ivanova +11 more
2019Cell Research61 citations Open access
Semantic Scholar
Non-coding RNA Expression, Function, and Variation during Drosophila Embryogenesis
I. Schor, G. Bussotti, M. Maleš, Mattia Forneris +3 more
2018Current Biology56 citations Open access
Semantic Scholar
Serum levels of mature microRNAs in DICER1-mutated pleuropulmonary blastoma
M. Murray, S. Bailey, K. Raby, H. Saini +6 more
2014Oncogenesis56 citations Open access
Semantic Scholar
Extent, Causes, and Consequences of Small RNA Expression Variation in Human Adipose Tissue
L. Parts, Å. Hedman, S. Keildson, A. Knights +21 more
2012PLoS Genetics52 citations Open access
Semantic Scholar
3′ Uridylation controls mature microRNA turnover during CD4 T-cell activation
Cristina Gutiérrez-Vázquez, A. Enright, Ana Rodríguez-Galán, Arantxa Pérez-García +7 more
2017RNA: A publication of the RNA Society51 citations Open access
Semantic Scholar
miR-221 affects multiple cancer pathways by modulating the level of hundreds messenger RNAs
L. Lupini, Cristian Bassi, M. Ferracin, N. Bartonicek +10 more
2013Frontiers in Genetics51 citations Open access
Semantic Scholar
Transposon‐driven transcription is a conserved feature of vertebrate spermatogenesis and transcript evolution
Matthew P. Davis, C. Carrieri, H. Saini, S. van Dongen +10 more
2017EMBO Reports46 citations Open access
Semantic Scholar
Large-scale analysis of microRNA expression, epi-transcriptomic features and biogenesis
Dimitrios M. Vitsios, Matthew P. Davis, S. van Dongen, A. Enright
2016Nucleic Acids Research46 citations Open access
Semantic Scholar
High-density P300 enhancers control cell state transitions
Steven J. Witte, A. Bradley, A. Enright, S. Muljo
2015BMC Genomics46 citations Open access
Semantic Scholar
Enhanced Susceptibility to Citrobacter rodentium Infection in MicroRNA-155-Deficient Mice
S. Clare, V. John, A. Walker, J. Hill +9 more
2012Infection and Immunity42 citations Open access
Semantic Scholar
Corrigendum: The zebrafish reference genome sequence and its relationship to the human genome
K. Howe, Matthew D. Clark, C. Torroja, J. Torrance +172 more
2013Nature40 citations Open access
Semantic Scholar
University of Dundee The RNA m 6 A Reader YTHDF 2 Is Essential for the Post-transcriptional Regulation of the Maternal Transcriptome and Oocyte Competence
I. Ivanova, Christian Much, M. Di Giacomo, Chiara Azzi +6 more
201739 citations
Semantic Scholar
Genomic positional conservation identifies topological anchor point RNAs linked to developmental loci
Paulo P. Amaral, T. Leonardi, N. Han, Emmanuelle Viré +12 more
2018Genome Biology37 citations Open access
Semantic Scholar
Depletion of HPV16 early genes induces autophagy and senescence in a cervical carcinogenesis model, regardless of viral physical state
Jennifer E. Hanning, H. Saini, M. Murray, M. Caffarel +9 more
2013Journal of Pathology37 citations Open access
Semantic Scholar
Defective germline reprogramming rewires the spermatogonial transcriptome
L. Vasiliauskaitė, Rebecca V Berrens, I. Ivanova, C. Carrieri +3 more
2018Nature Structural & Molecular Biology35 citations Open access
Semantic Scholar
MiR-277/4989 regulate transcriptional landscape during juvenile to adult transition in the parasitic helminth Schistosoma mansoni
A. Protasio, S. van Dongen, Julie N. R. Collins, L. Quintais +7 more
2017PLoS Neglected Tropical Diseases32 citations Open access
Semantic Scholar
Improved definition of the mouse transcriptome via targeted RNA sequencing
G. Bussotti, T. Leonardi, M. Clark, T. Mercer +6 more
2016Genome Research32 citations Open access
Semantic Scholar
Short- and long-range cis interactions between integrated HPV genomes and cellular chromatin dysregulate host gene expression in early cervical carcinogenesis
Ian J. Groves, E. Drane, Marco Michalski, J. Monahan +8 more
2021PLoS Pathogens27 citations Open access
Semantic Scholar

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Matthew P. Davis

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Christian Much — researcher profile on SciRah