H. Hoogeboom

Most-cited papers

Tetris is hard, even to approximate
Ron Breukelaar, E. Demaine, Susan Hohenberger, H. Hoogeboom +2 more
2002International journal of computational geometry and applications217 citations Open access
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Spiking Neural P Systems with Weights
Jun Wang, H. Hoogeboom, L. Pan, G. Paun +1 more
2010Neural Computation144 citations Open access
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Spiking Neural P Systems with Astrocytes
L. Pan, Jun Wang, H. Hoogeboom
2012Neural Computation131 citations
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MSO de nable string transductions and two-way nite state transducers
J. Engelfriet, H. Hoogeboom
201565 citations
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Simulating Counter Automata by P Systems with Symport/Antiport
P. Frisco, H. Hoogeboom
2002WMC-CdeA58 citations
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Interlace polynomials for multimatroids and delta-matroids
R. Brijder, H. Hoogeboom
2010European journal of combinatorics (Print)45 citations Open access
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The group structure of pivot and loop complementation on graphs and set systems
R. Brijder, H. Hoogeboom
2009European journal of combinatorics (Print)45 citations Open access
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DNA Computing, 12th International Meeting on DNA Computing, DNA 2006, Seoul, South Korea, June 5-9, 2006, Revised Selected Papers
H. Hoogeboom, G. Rozenberg
2006DNA35 citations
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XML transformation by tree-walking transducers with invisible pebbles
J. Engelfriet, H. Hoogeboom, Bart Samwel
2007ACM SIGACT-SIGMOD-SIGART Symposium on Principles of Database Systems33 citations
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P systems with symport/antiport simulating counter automata
P. Frisco, H. Hoogeboom
2004Acta Informatica28 citations
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Nullity and Loop Complementation for Delta-Matroids
R. Brijder, H. Hoogeboom
2010SIAM Journal on Discrete Mathematics25 citations Open access
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Automata with Nested Pebbles Capture First-Order Logic with Transitive Closure
J. Engelfriet, H. Hoogeboom
2007Log. Methods Comput. Sci.25 citations Open access
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Spiking Neural P Systems with Neuron Division
Jun Wang, H. Hoogeboom, L. Pan
2010Int. Conf. on Membrane Computing24 citations
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Reducibility of gene patterns in ciliates using the breakpoint graph
R. Brijder, H. Hoogeboom, G. Rozenberg
2006Theoretical Computer Science20 citations Open access
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A Graph Isomorphism Condition and Equivalence of Reaction Systems
Daniela Genova, H. Hoogeboom, Nataša Jonoska
2017Theoretical Computer Science18 citations Open access
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Nested Pebbles and Transitive Closure
J. Engelfriet, H. Hoogeboom
2006Symposium on Theoretical Aspects of Computer Science16 citations
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XML Navigation and Transformation by Tree-Walking Automata and Transducers with Visible and Invisible Pebbles
J. Engelfriet, H. Hoogeboom, Bart Samwel
2018Theoretical Computer Science15 citations Open access
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Nullity Invariance for Pivot and the Interlace Polynomial
R. Brijder, H. Hoogeboom
2009arXiv.org14 citations Open access
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Spiking Neural P Systems with Weights and Thresholds
Jun Wang, H. Hoogeboom, L. Pan, G. Paun
200914 citations
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Computing by Only Observing
M. Cavaliere, P. Frisco, H. Hoogeboom
2006International Conference on Developments in Language Theory13 citations Open access
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Tetris and decidability
H. Hoogeboom, W. Kosters
2004Information Processing Letters13 citations
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Asynchronous Extended Spiking Neural P Systems with Astrocytes
L. Pan, Jun Wang, H. Hoogeboom
2011Int. Conf. on Membrane Computing11 citations
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Context-Free Valence Grammars - Revisited
H. Hoogeboom
2001International Conference on Developments in Language Theory11 citations
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Quaternary Bicycle Matroids and the Penrose Polynomial for Delta-Matroids
R. Brijder, H. Hoogeboom
201210 citations
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The Adjacency Matroid of a Graph
L. Traldi, R. Brijder, H. Hoogeboom
2011Electronic Journal of Combinatorics10 citations Open access
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Limited Asynchronous Spiking Neural P Systems
L. Pan, Jun Wang, H. Hoogeboom
2011Fundamenta Informaticae10 citations
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Maximal pivots on graphs with an application to gene assembly
R. Brijder, H. Hoogeboom
2009Discrete Applied Mathematics10 citations Open access
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Strategies of loop recombination in ciliates
R. Brijder, H. Hoogeboom, M. Muskulus
2006Discrete Applied Mathematics10 citations Open access
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How to Construct Tetris Configurations
H. Hoogeboom, W. Kosters
2004Int. J. Intell. Games Simul.10 citations
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Carriers and Counters: P Systems with Carriers vs. (Blind) Counter Automata
H. Hoogeboom
2002International Conference on Developments in Language Theory10 citations
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Fair sticker languages
H. Hoogeboom, Nikè van Vugt
2000Acta Informatica10 citations
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Pivots, determinants, and perfect matchings of graphs
R. Brijder, T. Harju, H. Hoogeboom
2008Theoretical Computer Science9 citations Open access
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The Breakpoint Graph in Ciliates
R. Brijder, H. Hoogeboom, G. Rozenberg
2005International Symposium on Computational Life Sciences9 citations
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Sequences of languages in forbidding–enforcing families
A. Ehrenfeucht, H. Hoogeboom, G. Rozenberg, Nikè van Vugt
2001Soft Computing - A Fusion of Foundations, Methodologies and Applications9 citations
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Acyclic Constraint Logic and Games
H. Hoogeboom, W. Kosters, J. V. van Rijn, J. Vis
2014ICGA Journal8 citations Open access
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Finitary Compositions of Two-way Finite-State Transductions
J. Engelfriet, H. Hoogeboom
2007Fundamenta Informaticae8 citations
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Extracting reaction systems from function behavior
Daniela Genova, H. Hoogeboom, Z. Prodanoff
2020Journal of Membrane Computing7 citations Open access
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On aggregation in multiset-based self-assembly of graphs
F. Bernardini, R. Brijder, M. Cavaliere, G. Franco +2 more
2011Natural Computing7 citations Open access
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Perfectly quilted rectangular snake tilings
R. Brijder, H. Hoogeboom
2009Theoretical Computer Science7 citations Open access
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Combinatorial Aspects of Minimal DNA Expressions
R. van Vliet, H. Hoogeboom, G. Rozenberg
2004DNA7 citations
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The Algebra of Gene Assembly in Ciliates
R. Brijder, H. Hoogeboom
2014Discrete and Topological Models in Molecular Biology6 citations Open access
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Interlace Polynomials for Delta-Matroids
R. Brijder, H. Hoogeboom
20106 citations
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The fibers and range of reduction graphs in ciliates
R. Brijder, H. Hoogeboom
2007Acta Informatica6 citations Open access
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A Direct Construction of a Universal P System
P. Frisco, H. Hoogeboom, P. Sant
2002Fundamenta Informaticae6 citations
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Undecidable Problems for Context-free Grammars
H. Hoogeboom
20165 citations
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Combining overlap and containment for gene assembly in ciliates
R. Brijder, H. Hoogeboom
2010Theoretical Computer Science5 citations Open access
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Applicability of Loop Recombination in Ciliates Using the Breakpoint Graph
R. Brijder, H. Hoogeboom, Michael Muskulus
2006International Symposium on Computational Life Sciences5 citations
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Comparing reactions in reaction systems
Daniela Genova, H. Hoogeboom, J. Kleijn
2020Theoretical Computer Science4 citations Open access
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From Micro to Macro: How the Overlap Graph Determines the Reduction Graph in Ciliates
R. Brijder, H. Hoogeboom, G. Rozenberg
2007International Symposium on Fundamentals of Computation Theory4 citations
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The Construction of Minimal DNA Expressions
R. van Vliet, H. Hoogeboom, G. Rozenberg
2006Natural Computing4 citations
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