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Thomas G. Fai · SciRah

Researcher profile · Semantic Scholar

Thomas G. Fai

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Thomas G. Fai — researcher profile on SciRah

h-index: 13
Works: 65
Citations: 695

Most-cited papers

Staggered Schemes for Fluctuating Hydrodynamics
F. B. Usabiaga, J. Bell, R. Delgado-Buscalioni, A. Donev +3 more
2011Multiscale Modeling & simulation130 citations Open access
Semantic Scholar
A reversible mesoscopic model of diffusion in liquids: from giant fluctuations to Fick’s law
A. Donev, Thomas G. Fai, E. Vanden-Eijnden
201388 citations Open access
Semantic Scholar
Control of nuclear size by osmotic forces in Schizosaccharomyces pombe
Joël Lemière, Paula Real-Calderón, L. Holt, Thomas G. Fai +1 more
2021bioRxiv79 citations Open access
Semantic Scholar
Low Mach Number Fluctuating Hydrodynamics of Diffusively Mixing Fluids
A. Donev, A. Nonaka, Yifei Sun, Thomas G. Fai +2 more
201265 citations Open access
Semantic Scholar
Immersed Boundary Method for Variable Viscosity and Variable Density Problems Using Fast Constant-Coefficient Linear Solvers I: Numerical Method and Results
Thomas G. Fai, Boyce E. Griffith, Yoichiro Mori, C. Peskin
2013SIAM Journal on Scientific Computing62 citations Open access
Semantic Scholar
Simulation of Osmotic Swelling by the Stochastic Immersed Boundary Method
Chen-Hung Wu, Thomas G. Fai, P. Atzberger, C. Peskin
2015SIAM Journal on Scientific Computing30 citations Open access
Semantic Scholar
Length regulation of multiple flagella that self-assemble from a shared pool of components
Thomas G. Fai, Lishibanya Mohapatra, Prathitha Kar, J. Kondev +1 more
2018bioRxiv29 citations Open access
Semantic Scholar
Dynamics of Growth and Form in Prebiotic Vesicles.
Teresa Ruiz-Herrero, Thomas G. Fai, L. Mahadevan
2019Physical Review Letters24 citations Open access
Semantic Scholar
An autoinhibitory clamp of actin assembly constrains and directs synaptic endocytosis
Steven J. Del Signore, Charlotte F. Kelley, Emily M. Messelaar, Tania Lemos +6 more
2021eLife21 citations Open access
Semantic Scholar
Lubricated immersed boundary method in two dimensions
Thomas G. Fai, C. Rycroft
2017Journal of Computational Physics19 citations Open access
Semantic Scholar
Image-based model of the spectrin cytoskeleton for red blood cell simulation
Thomas G. Fai, Alejandra Leo-Macias, D. Stokes, C. Peskin
2017PLoS Comput. Biol.18 citations Open access
Semantic Scholar
Active elastohydrodynamics of vesicles in narrow, blind constrictions
Thomas G. Fai, R. Kusters, J. Harting, C. Rycroft +1 more
201715 citations Open access
Semantic Scholar
Immersed Boundary Method for Variable Viscosity and Variable Density Problems Using Fast Constant-Coefficient Linear Solvers II: Theory
Thomas G. Fai, Boyce E. Griffith, Yoichiro Mori, C. Peskin
2014SIAM Journal on Scientific Computing14 citations Open access
Semantic Scholar
Staggered schemes for incompressible fluctuating hydrodynamics
F. B. Usabiaga, J. Bell, R. Delgado-Buscalioni, A. Donev +3 more
201210 citations
Semantic Scholar
Passive endocytosis in model protocells
Stephanie J. Zhang, L. Lowe, Palapuravan Anees, Y. Krishnan +3 more
2023bioRxiv9 citations Open access
Semantic Scholar
Influence of the vessel wall geometry on the wall-induced migration of red blood cells
Ying Zhang, Thomas G. Fai
2022PLoS Comput. Biol.8 citations Open access
Semantic Scholar
An approach for quantitative mapping of synaptic periactive zone architecture and organization
Steven J. Del Signore, Margalit Mitzner, A. M. Silveira, Thomas G. Fai +1 more
2022Molecular Biology of the Cell8 citations Open access
Semantic Scholar
Combinatorics and complexity of guarding polygons with edge and point 2-transmitters
Sarah Cannon, Thomas G. Fai, J. Iwerks, Undine Leopold +1 more
2015Computational geometry6 citations Open access
Semantic Scholar
Quantitative biology: where modern biology meets physical sciences
S. Shekhar, Liang Zhu, L. Mazutis, A. Sgro +2 more
2014Molecular Biology of the Cell6 citations Open access
Semantic Scholar
Dynamics of Vesicles Driven Into Closed Constrictions by Molecular Motors
Youngmin Park, Thomas G. Fai
2020Bulletin of Mathematical Biology5 citations Open access
Semantic Scholar
Reversible Diffusion by Thermal Fluctuations
A. Donev, Thomas G. Fai, E. Vanden-Eijnden
20135 citations Open access
Semantic Scholar
Coarse-grained Stochastic Model of Myosin-Driven Vesicles into Dendritic Spines
Youngmin Park, Prashant Singh, Thomas G. Fai
2021SIAM Journal on Applied Mathematics4 citations Open access
Semantic Scholar
Erratum: Immersed Boundary Method for Variable Viscosity and Variable Density Problems Using Fast Constant-Coefficient Linear Solvers I: Numerical Method and Results
Thomas G. Fai, Boyce E. Griffith, Yoichiro Mori, C. Peskin
2014SIAM Journal on Scientific Computing4 citations
Semantic Scholar
Reversible Diffusive Mixing by Thermal Velocity Fluctuations
A. Donev, Thomas G. Fai, Vanden-Eijnden
20134 citations
Semantic Scholar
Comparison of Extended Lubrication Theories for Stokes Flow
Sarah Dennis, Thomas G. Fai
2025Proceedings of the Royal Society A Mathematical Physical and Engineering Science3 citations Open access
Semantic Scholar
Comparison of Lubrication Theory and Stokes Flow in Corner Geometries with Flow Separation
Sarah Dennis, Thomas G. Fai
20253 citations
Semantic Scholar
Modeling the Transition between Localized and Extended Deposition in Flow Networks through Packings of Glass Beads.
Gess Kelly, N. Bizmark, B. Chakraborty, S. Datta +1 more
2022Physical Review Letters3 citations Open access
Semantic Scholar
Leaky cell model of hard spheres.
Thomas G. Fai, Jamie M. Taylor, E. Virga, Xiao-Yu Zheng +1 more
2020Journal of Chemical Physics3 citations Open access
Semantic Scholar
The importance of hydrodynamic fluctuations for diffusion in liquids
A. Donev, Thomas G. Fai, E. Vanden-Eijnden
20133 citations
Semantic Scholar
Fast Solver for the Reynolds Equation on Piecewise Linear Geometries
Sarah Dennis, Thomas G. Fai
20262 citations
Semantic Scholar
Analyses of bent spindles reveal the mechanics of anaphase B in fission yeast
Paula Real-Calderón, Thomas G. Fai, R. Daga, Joël Lemière +1 more
2025bioRxiv2 citations Open access
Semantic Scholar
Stochastic Gene Expression Model of Nuclear-to-Cell Ratio Homeostasis
Xuesong Bai, Thomas G. Fai
2024SIAM Journal on Applied Mathematics2 citations Open access
Semantic Scholar
Cavity Volume and Free Energy in Many-Body Systems
Jamie M. Taylor, Thomas G. Fai, E. Virga, Xiao-Yu Zheng +1 more
2021Journal of nonlinear science2 citations Open access
Semantic Scholar
Multi-scale model of clogging in microfluidic devices with grid-like geometries
Gess Kelly, Thomas G. Fai
2021Proceedings of the Royal Society A2 citations Open access
Semantic Scholar
Autoregulation clamps the synaptic membrane-remodeling machinery and promotes productive actin-dependent endocytosis
Steven J. Del Signore, Charlotte F. Kelley, Emily M. Messelaar, Tania Lemos +6 more
2020bioRxiv2 citations Open access
Semantic Scholar
Mathematical model of Nucleocytoplasmic Transport and Nuclear-to-Cell Ratio in a growing cell.
Xuesong Bai, Thomas G. Fai
2025Journal of Theoretical Biology1 citations Open access
Semantic Scholar
CURVATURE-BASED MACHINE LEARNING METHOD FOR AUTOMATED SEGMENTATION OF DENDRITIC SPINES
A. Geraldo, Michael A. Chirillo, Kristen M. Harris, Thomas G. Fai
2025bioRxiv1 citations
Semantic Scholar
Emergence of Anti-chemotactic Flocking in Active Biomimetic Colloids
J. D. Lopes, Benjamin Winterstrain, Fernando Caballero, Amélie Chardac +10 more
20251 citations
Semantic Scholar
Passive endocytosis in model protocells
Stephanie J. Zhang, L. Lowe, Palapuravan Anees, Yamuna Krishnan +3 more
2023Proceedings of the National Academy of Sciences of the United States of America1 citations Open access
Semantic Scholar
FAST SOLVER FOR DIFFUSIVE TRANSPORT TIMES ON DYNAMIC INTRACELLULAR NETWORKS
Lachlan Elam, Mónica C. Quiñones-Frías, Ying Zhang, A. Rodal +1 more
2022SIAM Journal on Applied Mathematics1 citations Open access
Semantic Scholar
Fluid Mechanics of the Red Blood Cell and its Cytoskeleton by an Immersed Boundary Method with Nonuniform Viscosity and Density
Thomas G. Fai, C. Peskin
20141 citations
Semantic Scholar
Glucose Regulation in Diabetes
Samantha Lozada Advised, C. Peskin, Thomas G. Fai
20111 citations
Semantic Scholar
Analyses of bent spindles reveal the mechanics of anaphase B in fission yeast
Paula Real-Calderón, Thomas G. Fai, R. Daga, Joël Lemière +1 more
2026Molecular Biology of the Cell0 citations Open access
Semantic Scholar
CURVATURE-BASED MACHINE LEARNING METHOD FOR AUTOMATED SEGMENTATION OF DENDRITIC SPINES
A. Geraldo, Michael A. Chirillo, K. Harris, Thomas G. Fai
2026Biophysical Journal0 citations Open access
Semantic Scholar
Dynamics and stochastic resonance in a mathematical model of bistable phosphorylation and nuclear size control
Xuesong Bai, Jonathan Touboul, Thomas G. Fai
20260 citations
Semantic Scholar
Fast Solvers for the Reynolds Equation on Piecewise Linear Geometries
Sarah Dennis, Thomas G. Fai
2026arXiv.org0 citations
Semantic Scholar
Squirming motion near corrugated surfaces
S. Garai, Thomas G. Fai, Christina Kurzthaler
20260 citations
Semantic Scholar
Vesicle Translocation into Closed Constrictions as a Function of Molecular Motor Parameters
Youngmin Park, Thomas G. Fai
20250 citations
Semantic Scholar
Comparison of lubrication theory and Stokes flow models in step bearings with flow separation
Sarah Dennis, Thomas G. Fai
2025arXiv.org0 citations
Semantic Scholar
A confined rod: mean field theory for hard rod-like particles
Jamie M. Taylor, Thomas G. Fai, E. Virga, Xiao-Yu Zheng +1 more
2023Liquid crystals (Print)0 citations Open access
Semantic Scholar

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C. Peskin×9
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C. Peskin — researcher profile on SciRah
A. Donev×7
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A. Donev — researcher profile on SciRah
Boyce E. Griffith×5
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Sarah Dennis×5
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A. Rodal — researcher profile on SciRah

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Paula Real-Calderón×3

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Yoichiro Mori×3

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Steven J. Del Signore×3

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Gess Kelly — researcher profile on SciRah