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Benjamin M. Good · SciRah

Researcher profile · Semantic Scholar

Benjamin M. Good

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Benjamin M. Good — researcher profile on SciRah

h-index: 24
Works: 78
Citations: 5,773

Most-cited papers

The Gene Ontology resource: enriching a GOld mine
S. Carbon, Eric Douglass, Benjamin M. Good, D. Unni +176 more
2020Nucleic Acids Res.3,172 citations Open access
Semantic Scholar
CIViC is a community knowledgebase for expert crowdsourcing the clinical interpretation of variants in cancer
M. Griffith, N. Spies, K. Krysiak, Joshua F. McMichael +41 more
2017Nature Genetics604 citations Open access
Semantic Scholar
Tag clouds for summarizing web search results
B. Kuo, T. Hentrich, Benjamin M. Good, M. Wilkinson
2007The Web Conference226 citations
Semantic Scholar
Crowdsourcing for bioinformatics
Benjamin M. Good, Andrew I. Su
2013Bioinform.150 citations Open access
Semantic Scholar
Wikidata as a knowledge graph for the life sciences
A. Waagmeester, Gregory S. Stupp, Sebastian Burgstaller-Muehlbacher, Benjamin M. Good +26 more
2020eLife132 citations Open access
Semantic Scholar
Gene Ontology Causal Activity Modeling (GO-CAM) moves beyond GO annotations to structured descriptions of biological functions and systems
P. Thomas, D. Hill, H. Mi, David Osumi-Sutherland +8 more
2019Nature Genetics130 citations Open access
Semantic Scholar
Interoperability with Moby 1.0--it's better than sharing your toothbrush!
M. Wilkinson, Martin Senger, Edward A. Kawas, R. Bruskiewich +55 more
2008Briefings in Bioinformatics118 citations Open access
Semantic Scholar
Crowdsourcing in biomedicine: challenges and opportunities
Ritu Khare, Benjamin M. Good, Robert Leaman, Andrew I. Su +1 more
2016Briefings Bioinform.109 citations Open access
Semantic Scholar
The Life Sciences Semantic Web is Full of Creeps!
Benjamin M. Good, M. Wilkinson
2006Briefings Bioinform.95 citations Open access
Semantic Scholar
Games with a scientific purpose
Benjamin M. Good, Andrew I. Su
2011Genome Biology94 citations Open access
Semantic Scholar
Organizing knowledge to enable personalization of medicine in cancer
Benjamin M. Good, Benjamin J. Ainscough, Joshua F. McMichael, Andrew I. Su +1 more
2014Genome Biology90 citations Open access
Semantic Scholar
Wikidata as a semantic framework for the Gene Wiki initiative
Sebastian Burgstaller-Muehlbacher, A. Waagmeester, Elvira Mitraka, J. Turner +7 more
2015bioRxiv80 citations Open access
Semantic Scholar
The Gene Wiki in 2011: community intelligence applied to human gene annotation
Benjamin M. Good, Erik L. Clarke, L. de Alfaro, Andrew I. Su
2011Nucleic Acids Res.52 citations Open access
Semantic Scholar
MICROTASK CROWDSOURCING FOR DISEASE MENTION ANNOTATION IN PUBMED ABSTRACTS
Benjamin M. Good, Max Nanis, Chun-Lei Wu, Andrew I. Su
2014Pacific Symposium on Biocomputing51 citations Open access
Semantic Scholar
WikiGenomes: an open web application for community consumption and curation of gene annotation data in Wikidata
Timothy Putman, S. Lelong, Sebastian Burgstaller-Muehlbacher, A. Waagmeester +7 more
2017bioRxiv50 citations Open access
Semantic Scholar
Fast, Cheap and Out of Control: A Zero Curation Model for Ontology Development
Benjamin M. Good, Erin M. Tranfield, Poh C. Tan, M. Shehata +4 more
2005Pacific Symposium on Biocomputing43 citations
Semantic Scholar
A task-based approach for Gene Ontology evaluation
Erik L. Clarke, Salvatore Loguercio, Benjamin M. Good, Andrew I. Su
2013Journal of Biomedical Semantics37 citations Open access
Semantic Scholar
Wikidata: A platform for data integration and dissemination for the life sciences and beyond
Elvira Mitraka, A. Waagmeester, Sebastian Burgstaller-Muehlbacher, L. Schriml +2 more
2015bioRxiv36 citations Open access
Semantic Scholar
The Cure: Design and Evaluation of a Crowdsourcing Game for Gene Selection for Breast Cancer Survival Prediction
Benjamin M. Good, Salvatore Loguercio, O. Griffith, Max Nanis +2 more
2014JMIR Serious Games36 citations Open access
Semantic Scholar
Ten Simple Rules for Cultivating Open Science and Collaborative R&D
H. Masum, Aarthi Rao, Benjamin M. Good, M. Todd +6 more
2013PLoS Comput. Biol.35 citations Open access
Semantic Scholar
The Implicitome: A Resource for Rationalizing Gene-Disease Associations
K. Hettne, Mark Thompson, H. van Haagen, E. van der Horst +18 more
2016PLoS ONE31 citations Open access
Semantic Scholar
Social tagging in the life sciences: characterizing a new metadata resource for bioinformatics
Benjamin M. Good, Joseph T. Tennis, M. Wilkinson
2009BMC Bioinformatics30 citations Open access
Semantic Scholar
Citizen Science for Mining the Biomedical Literature
Ginger Tsueng, Steven M. Nanis, J. Fouquier, Benjamin M. Good +1 more
2016bioRxiv28 citations Open access
Semantic Scholar
Reactome and the Gene Ontology: digital convergence of data resources
Benjamin M. Good, K. V. Van Auken, D. Hill, H. Mi +7 more
2021Bioinform.24 citations Open access
Semantic Scholar
Dizeez: An Online Game for Human Gene-Disease Annotation
Salvatore Loguercio, Benjamin M. Good, Andrew I. Su
2013PLoS ONE21 citations Open access
Semantic Scholar
Bridging the gap between social tagging and semantic annotation: E.D. the Entity Describer
Benjamin M. Good, Edward A. Kawas, M. Wilkinson
200720 citations Open access
Semantic Scholar
Combining machine learning, crowdsourcing and expert knowledge to detect chemical-induced diseases in text
À. Bravo, Tong Li, Andrew I. Su, Benjamin M. Good +1 more
2016Database J. Biol. Databases Curation18 citations Open access
Semantic Scholar
iHOPerator: user-scripting a personalized bioinformatics Web, starting with the iHOP website
Benjamin M. Good, Edward A. Kawas, B. Kuo, M. Wilkinson
2006BMC Bioinformatics17 citations Open access
Semantic Scholar
A crowdsourcing workflow for extracting chemical-induced disease relations from free text
Tong Li, À. Bravo, L. Furlong, Benjamin M. Good +1 more
2016Database J. Biol. Databases Curation14 citations Open access
Semantic Scholar
Centralizing content and distributing labor: a community model for curating the very long tail of microbial genomes
Timothy Putman, Sebastian Burgstaller-Muehlbacher, A. Waagmeester, Chun-Lei Wu +2 more
2015bioRxiv14 citations Open access
Semantic Scholar
Gene Wiki Reviews: marrying crowdsourcing with traditional peer review.
Andrew I. Su, Benjamin M. Good, A. VanWijnen
2013Gene14 citations
Semantic Scholar
Building a biomedical semantic network in Wikipedia with Semantic Wiki Links
Benjamin M. Good, Erik L. Clarke, Salvatore Loguercio, Andrew I. Su
2012Database J. Biol. Databases Curation14 citations Open access
Semantic Scholar
Structured reviews for data and knowledge-driven research
N. Queralt-Rosinach, Gregory S. Stupp, Tong Li, Michael Mayers +4 more
2019bioRxiv13 citations Open access
Semantic Scholar
ChlamBase: a curated model organism database for the Chlamydia research community
Timothy Putman, K. Hybiske, Derek Jow, Cyrus Afrasiabi +7 more
2019Database J. Biol. Databases Curation13 citations Open access
Semantic Scholar
Linking genes to diseases with a SNPedia-Gene Wiki mashup
Benjamin M. Good, Erik L. Clarke, Salvatore Loguercio, Andrew I. Su
2012Journal of Biomedical Semantics13 citations Open access
Semantic Scholar
Mining the Gene Wiki for functional genomic knowledge
Benjamin M. Good, D. Howe, Simon M. Lin, W. Kibbe +1 more
2011BMC Genomics12 citations Open access
Semantic Scholar
KG-COVID-19: A Framework to Produce Customized Knowledge Graphs for COVID-19 Response
Justin T. Reese, D. Unni, T. Callahan, Luca Cappelletti +14 more
2020Patterns11 citations Open access
Semantic Scholar
CIViC: A knowledgebase for expert-crowdsourcing the clinical interpretation of variants in cancer
M. Griffith, N. Spies, K. Krysiak, Adam C. Coffman +36 more
2016bioRxiv11 citations Open access
Semantic Scholar
Bio2RDF : A Semantic Web Atlas of Post Genomic Knowledge about Human and Mouse
F. Belleau, N. Tourigny, Benjamin M. Good, J. Morissette
2008Data Integration in the Life Sciences11 citations
Semantic Scholar
DataBiNS: a BioMoby-based data-mining workflow for biological pathways and non-synonymous SNPs
Young-Chang Song, Edward A. Kawas, Benjamin M. Good, M. Wilkinson +1 more
2007Bioinform.11 citations Open access
Semantic Scholar
Term based comparison metrics for controlled and uncontrolled indexing languages
Benjamin M. Good, Joseph T. Tennis
2009Information Research9 citations
Semantic Scholar
Applying citizen science to gene, drug and disease relationship extraction from biomedical abstracts
Ginger Tsueng, Max Nanis, J. Fouquier, Michael Mayers +2 more
2019Bioinform.8 citations Open access
Semantic Scholar
Arachne: an OWL RL Reasoner Applied to Gene Ontology Causal Activity Models (and Beyond)
J. Balhoff, Benjamin M. Good, S. Carbon, C. Mungall
2018International Workshop on the Semantic Web8 citations Open access
Semantic Scholar
Gene Wiki Reviews – Raising the quality and accessibility of information about the human genome
Ginger Tsueng, Benjamin M. Good, P. Ping, E. Golemis +3 more
2016Gene8 citations Open access
Semantic Scholar
Opportunities and Challenges Presented by Wikidata in the Context of Biocuration
Benjamin M. Good, Sebastian Burgstaller-Muehlbacher, Elvira Mitraka, Timothy Putman +2 more
2016ICBO/BioCreative7 citations
Semantic Scholar
genegames.org: High-Throughput Access to Biological Knowledge and Reasoning through Online Games
Benjamin M. Good, Salvatore Loguercio, Max Nanis, Andrew I. Su
20122012 IEEE Second International Conference on Healthcare Informatics, Imaging and Systems Biology6 citations
Semantic Scholar
Knowledge.Bio: A Web Application for Exploring, Building and Sharing Webs of Biomedical Relationships Mined from PubMed
R. Bruskiewich, Kenneth C. Huellas-Bruskiewicz, Farzin Ahmed, Rajaram Kaliyaperumal +5 more
2016bioRxiv5 citations Open access
Semantic Scholar
ChlamBase: a curated model organism database for the Chlamydia research community
Timothy Putman, K. Hybiske, Derek Jow, Cyrus Afrasiabi +7 more
2019Database : the journal of biological databases and curation4 citations Open access
Semantic Scholar
Exposing ambiguities in a relation-extraction gold standard with crowdsourcing
Tong Li, Benjamin M. Good, Andrew I. Su
2015arXiv.org4 citations
Semantic Scholar
Strategies for amassing, characterizing, and applying third-party metadata in bioinformatics
Benjamin M. Good
20094 citations
Semantic Scholar

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