David Tse

Most-cited papers

Longitudinal multi-omics of host–microbe dynamics in prediabetes
Wenyu Zhou, M. R. Sailani, K. Contrepois, Yan-Jiao Zhou +45 more
2019Nature501 citations Open access
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Prism: Deconstructing the Blockchain to Approach Physical Limits
V. Bagaria, Sreeram Kannan, David Tse, G. Fanti +1 more
2019Conference on Computer and Communications Security266 citations Open access
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Generalizable Adversarial Training via Spectral Normalization
F. Farnia, Jesse M. Zhang, David Tse
2018International Conference on Learning Representations159 citations
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Everything is a Race and Nakamoto Always Wins
A. Dembo, Sreeram Kannan, Ertem Nusret Tas, David Tse +3 more
2020IACR Cryptology ePrint Archive132 citations Open access
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Fundamental limits of DNA storage systems
Reinhard Heckel, I. Shomorony, K. Ramchandran, David Tse
2017International Symposium on Information Theory131 citations
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Large dataset enables prediction of repair after CRISPR-Cas9 editing in primary T cells.
Ryan T. Leenay, Amirali Aghazadeh, J. Hiatt, David Tse +12 more
2019Nature Biotechnology124 citations Open access
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A Minimax Approach to Supervised Learning
F. Farnia, David Tse
2016Neural Information Processing Systems123 citations
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Feasibility of Interference Alignment for the MIMO Interference Channel
Guy Bresler, Dustin A. Cartwright, David Tse
2013IEEE Transactions on Information Theory122 citations Open access
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FinisherSC : A repeat-aware tool for upgrading de-novo assembly using long reads
Ka-Kit Lam, K. Labutti, A. Khalak, David Tse
2014bioRxiv121 citations Open access
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Fast and accurate single-cell RNA-seq analysis by clustering of transcript-compatibility counts
V. Ntranos, G. Kamath, Jesse M. Zhang, L. Pachter +1 more
2016Genome Biology114 citations Open access
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Determining sequencing depth in a single-cell RNA-seq experiment
Martin Jinye Zhang, V. Ntranos, David Tse
2020Nature Communications112 citations Open access
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Ebb-and-Flow Protocols: A Resolution of the Availability-Finality Dilemma
Joachim Neu, Ertem Nusret Tas, David Tse
2020IEEE Symposium on Security and Privacy111 citations Open access
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HINGE: long-read assembly achieves optimal repeat resolution
G. Kamath, I. Shomorony, F. Xia, T. Courtade +1 more
2016bioRxiv103 citations Open access
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Three Attacks on Proof-of-Stake Ethereum
Caspar Schwarz-Schilling, Joachim Neu, B. Monnot, Aditya Asgaonkar +2 more
2021IACR Cryptology ePrint Archive101 citations
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A RM-Polar Codes
Bin Li, Hui Shen, David Tse
2014arXiv.org99 citations
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Spatial Degrees of Freedom of Large Distributed MIMO Systems and Wireless Ad Hoc Networks
Ayfer Özgür, O. Lévêque, David Tse
2013IEEE Journal on Selected Areas in Communications84 citations Open access
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Valid post-clustering differential analysis for single-cell RNA-Seq
Jesse M. Zhang, G. Kamath, David Tse
2019Cell Systems76 citations Open access
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Capacity-achieving rateless polar codes
Bin Li, David Tse, Kai Chen, Hui Shen
2015International Symposium on Information Theory66 citations Open access
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A Convex Duality Framework for GANs
F. Farnia, David Tse
2018Neural Information Processing Systems65 citations
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Understanding GANs: the LQG Setting
S. Feizi, Changho Suh, F. Xia, David Tse
2017arXiv.org65 citations
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Information Dispersal with Provable Retrievability for Rollups
Kamilla Nazirkhanova, Joachim Neu, David Tse
2021IACR Cryptology ePrint Archive55 citations Open access
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Deconstructing Generative Adversarial Networks
Bang-Hua Zhu, Jian-Tao Jiao, David Tse
2019IEEE Transactions on Information Theory55 citations Open access
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An interpretable framework for clustering single-cell RNA-Seq datasets
Jesse M. Zhang, Jue Fan, H. C. Fan, David Rosenfeld +1 more
2017BMC Bioinformatics53 citations Open access
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Deconstructing the Blockchain to Approach Physical Limits
V. Bagaria, Sreeram Kannan, David Tse, G. Fanti +1 more
2018IACR Cryptology ePrint Archive48 citations
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Shannon: An Information-Optimal de Novo RNA-Seq Assembler
Sreeram Kannan, Joseph Hui, Kayvon Mazooji, L. Pachter +1 more
2016bioRxiv44 citations Open access
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Near-optimal assembly for shotgun sequencing with noisy reads
Ka-Kit Lam, A. Khalak, David Tse
2014BMC Bioinformatics41 citations Open access
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Porcupine Neural Networks: (Almost) All Local Optima are Global
S. Feizi, Hamid Javadi, Jesse M. Zhang, David Tse
2017arXiv.org39 citations
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Medoids in almost linear time via multi-armed bandits
V. Bagaria, G. Kamath, V. Ntranos, Martin Jinye Zhang +1 more
2017International Conference on Artificial Intelligence and Statistics38 citations
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Information-optimal genome assembly via sparse read-overlap graphs
I. Shomorony, Samuel H. Kim, T. Courtade, David Tse
2016Bioinform.38 citations Open access
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Proof-of-Stake Longest Chain Protocols: Security vs Predictability
V. Bagaria, A. Dembo, Sreeram Kannan, Sewoong Oh +4 more
2019ConsensusDay@CCS36 citations
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Reduce the Complexity of List Decoding of Polar Codes by Tree-Pruning
Kai Chen, Bin Li, Hui Shen, Jie Jin +1 more
2015IEEE Communications Letters36 citations Open access
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Low-latency polar codes via hybrid decoding
Bin Li, Hui Shen, David Tse, W. Tong
2014International Symposium on Turbo Codes and Iterative Information Processing34 citations
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Community Recovery in Graphs with Locality
Yuxin Chen, G. Kamath, Changho Suh, David Tse
2016International Conference on Machine Learning33 citations
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Boomerang: Redundancy Improves Latency and Throughput in Payment-Channel Networks
V. Bagaria, Joachim Neu, David Tse
2019Financial Cryptography32 citations Open access
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Optimal DNA shotgun sequencing: Noisy reads are as good as noiseless reads
A. Motahari, K. Ramchandran, David Tse, Nan Ma
20132013 IEEE International Symposium on Information Theory32 citations Open access
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Understanding GANs in the LQG Setting: Formulation, Generalization and Stability
S. Feizi, F. Farnia, Tony Ginart, David Tse
2020IEEE Journal on Selected Areas in Information Theory31 citations Open access
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Spectral Jaccard Similarity: A New Approach to Estimating Pairwise Sequence Alignments
Tavor Z. Baharav, G. Kamath, David Tse, I. Shomorony
2019bioRxiv30 citations Open access
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PoSAT: Proof-of-Work Availability andUnpredictability, without the Work
Soubhik Deb, Sreeram Kannan, David Tse
2020Financial Cryptography29 citations Open access
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Parallel Decoders of Polar Codes
Bin Li, Hui Shen, David Tse
2013arXiv.org29 citations
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Hidden Hamiltonian Cycle Recovery via Linear Programming
V. Bagaria, Jian Ding, David Tse, Yi-Hong Wu +1 more
2018Operational Research26 citations Open access
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Do Read Errors Matter for Genome Assembly?
I. Shomorony, T. Courtade, David Tse
2015bioRxiv26 citations Open access
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Ultra Fast Medoid Identification via Correlated Sequential Halving
Tavor Z. Baharav, David Tse
2019Neural Information Processing Systems25 citations
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NeuralFDR: Learning Discovery Thresholds from Hypothesis Features
Fei Xia, Martin Jinye Zhang, James Y. Zou, David Tse
2017Neural Information Processing Systems24 citations
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An Approximation Approach to Network Information Theory
A. Avestimehr, S. Diggavi, C. Tian, David Tse
2015Foundations and Trends in Communications and Information Theory24 citations
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Two-unicast is hard
Sudeep Kamath, David Tse, Chih-Chun Wang
20142014 IEEE International Symposium on Information Theory23 citations
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Prism Removes Consensus Bottleneck for Smart Contracts
Gerui Wang, Shuo Wang, V. Bagaria, David Tse +1 more
2020Crypto Valley Conference on Blockchain Technology20 citations Open access
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One read per cell per gene is optimal for single-cell RNA-Seq
Martin Jinye Zhang, V. Ntranos, David Tse
2018bioRxiv19 citations Open access
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Partial DNA assembly: A rate-distortion perspective
I. Shomorony, G. Kamath, Fei Xia, T. Courtade +1 more
2016International Symposium on Information Theory19 citations Open access
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Boomerang: Redundancy Improves Latency and Throughput in Payment Networks
V. Bagaria, Joachim Neu, David Tse
2019arXiv.org17 citations
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RefShannon: A genome-guided transcriptome assembler using sparse flow decomposition
Shunfu Mao, L. Pachter, David Tse, Sreeram Kannan
2020PLoS ONE16 citations Open access
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