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A. Eng · SciRah

Researcher profile · Semantic Scholar

A. Eng

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A. Eng — researcher profile on SciRah

h-index: 15
Works: 23
Citations: 1,292

Most-cited papers

The ketogenic diet influences taxonomic and functional composition of the gut microbiota in children with severe epilepsy
M. Lindefeldt, A. Eng, H. Darban, A. Bjerkner +6 more
2019npj Biofilms and Microbiomes279 citations Open access
Semantic Scholar
Metabolic Model-Based Integration of Microbiome Taxonomic and Metabolomic Profiles Elucidates Mechanistic Links between Ecological and Metabolic Variation
Cecilia Noecker, A. Eng, S. Srinivasan, C. Theriot +4 more
2016mSystems179 citations Open access
Semantic Scholar
Human and Extracellular DNA Depletion for Metagenomic Analysis of Complex Clinical Infection Samples Yields Optimized Viable Microbiome Profiles
M. Nelson, C. Pope, R. Marsh, D. Wolter +10 more
2019Cell Reports153 citations Open access
Semantic Scholar
Fecal dysbiosis in infants with cystic fibrosis is associated with early linear growth failure
H. Hayden, A. Eng, C. Pope, M. Brittnacher +9 more
2020Nature Medicine95 citations Open access
Semantic Scholar
Microbial Community Design:Methods, Applications, and Opportunities
A. Eng, Elhanan Borenstein
2019Current Opinion in Biotechnology84 citations Open access
Semantic Scholar
Taxa-function robustness in microbial communities
A. Eng, Elhanan Borenstein
2018Microbiome74 citations Open access
Semantic Scholar
High-Resolution Characterization of the Human Microbiome
Cecilia Noecker, Colin P. McNally, A. Eng, Elhanan Borenstein
2016Translational Research: The Journal of Laboratory and Clinical Medicine70 citations Open access
Semantic Scholar
BURRITO: An Interactive Multi-Omic Tool for Visualizing Taxa–Function Relationships in Microbiome Data
Colin P. McNally, A. Eng, Cecilia Noecker, William C. Gagne-Maynard +1 more
2017bioRxiv67 citations Open access
Semantic Scholar
Microbiome sharing between children, livestock and household surfaces in western Kenya
E. Mosites, M. Sammons, E. Otiang, A. Eng +16 more
2017PLoS ONE62 citations Open access
Semantic Scholar
An algorithm for designing minimal microbial communities with desired metabolic capacities
A. Eng, Elhanan Borenstein
2016Bioinform.50 citations Open access
Semantic Scholar
The Skin Microbiome of the Neotropical Frog Craugastor fitzingeri: Inferring Potential Bacterial-Host-Pathogen Interactions From Metagenomic Data
E. Rebollar, Ana Gutiérrez-Preciado, Cecilia Noecker, A. Eng +7 more
2018Frontiers in Microbiology46 citations Open access
Semantic Scholar
Maintenance tobramycin primarily affects untargeted bacteria in the CF sputum microbiome
M. Nelson, D. Wolter, A. Eng, Eli J. Weiss +15 more
2020Thorax45 citations Open access
Semantic Scholar
MIMOSA2: A metabolic network-based tool for inferring mechanism-supported relationships in microbiome-metabolome data
Cecilia Noecker, A. Eng, Elhanan Borenstein
2021bioRxiv26 citations Open access
Semantic Scholar
MetaLAFFA: a flexible, end-to-end, distributed computing-compatible metagenomic functional annotation pipeline
A. Eng, A. Verster, Elhanan Borenstein
2020BMC Bioinformatics20 citations Open access
Semantic Scholar
Infants with cystic fibrosis have altered fecal functional capacities with potential clinical and metabolic consequences
A. Eng, H. Hayden, C. Pope, M. Brittnacher +9 more
2021BMC Microbiology17 citations Open access
Semantic Scholar
Gastrointestinal factors associated with hospitalization in infants with cystic fibrosis: Results from the BONUS Study
M. Sathe, Rong Huang, S. Heltshe, A. Eng +8 more
2021Journal of Pediatric Gastroenterology and Nutrition - JPGN14 citations Open access
Semantic Scholar
xenoGI: reconstructing the history of genomic island insertions in clades of closely related bacteria
E. Bush, A. E. Clark, Carissa A. DeRanek, A. Eng +7 more
2017BMC Bioinformatics9 citations Open access
Semantic Scholar
P314 Fecal dysbiosis is associated with growth failure in infants with cystic fibrosis: a multicentre study
H. Hayden, A. Eng, C. Pope, M. Brittnacher +9 more
2019Journal of Cystic Fibrosis2 citations Open access
Semantic Scholar
Characterising the taxonomic composition of children and livestock gut microbiomes and of environmental samples and the potential role for household-level microbiome sharing in western Kenya
E. Mosites, T. Mwangi, E. Otiang, Gemina Garland-Lewis +16 more
20162 citations Open access
Semantic Scholar
Effects of Therapeutic Antibiotic Exposure on the Oropharyngeal and Fecal Microbiota in Infants With Cystic Fibrosis
H. Hayden, M. Nelson, Sydney E. Ross, A. Verster +10 more
2025Pediatric Pulmonology1 citations Open access
Semantic Scholar
The Synthetic Epitope Atlas: High-Throughput Design and Validation of De Novo Antibody-Antigen Complexes
Nicholas A. Altieri, Joseph L. Harman, David Noble, N. Murakowska +20 more
2026bioRxiv0 citations Open access
Semantic Scholar
MIMOSA2: a metabolic network-based tool for inferring mechanism-supported relationships in microbiome-metabolome data
Cecilia Noecker, A. Eng, Efrat Muller, Elhanan Borenstein
2022Bioinform.0 citations Open access
Semantic Scholar
Northeastern Section of the AUA 72nd Annual Meeting Abstracts
L. Donnelly, Jiaqi Tang, F. Lian, Paul J. Higgins +471 more
20200 citations
Semantic Scholar

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