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Tin Wee Tan · SciRah

Researcher profile · OpenAlex

Tin Wee Tan

National University of Singapore
Department of Biochemistry, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore
SG
National Supercomputing Centre Singapore
Department of Biochemistry, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore
SG

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Tin Wee Tan — researcher profile on SciRah

ORCID iD 0009-0008-7829-3647

Citations: 2,949
h-index: 33
i10-index: 63
Works: 132

From OpenAlex.

Genomics and Phylogenetic StudiesGenetics, Bioinformatics, and Biomedical ResearchScientific Computing and Data Management

Most-cited papers

Evolutionarily Conserved Protein Sequences of Influenza A Viruses, Avian and Human, as Vaccine Targets
A. T. Heiny, Olivo Miotto, Srinivasan N. Kellathur, Asif M. Khan +4 more
2007PLoS ONE196 citations Open access
OpenAlex
Identification of human-to-human transmissibility factors in PB2 proteins of influenza A by large-scale mutual information analysis
Olivo Miotto, A. T. Heiny, Tin Wee Tan, Joseph Thomas August +1 more
2008BMC Bioinformatics118 citations Open access
OpenAlex
Methods and protocols for prediction of immunogenic epitopes
J. Tong, Tin Wee Tan, Shoba Ranganathan
2006Briefings in Bioinformatics109 citations
OpenAlex
Conservation and Variability of Dengue Virus Proteins: Implications for Vaccine Design
Asif M. Khan, Olivo Miotto, Eduardo J. M. Nascimento, K.N. Srinivasan +7 more
2008PLoS neglected tropical diseases107 citations Open access
OpenAlex
Towards BioDBcore: a community-defined information specification for biological databases
Pascale Gaudet, Amos Bairoch, Dawn Field, Susanna‐Assunta Sansone +35 more
2011Database95 citations Open access
OpenAlex
SPdb – a signal peptide database
Khar Heng Choo, Tin Wee Tan, Shoba Ranganathan
2005BMC Bioinformatics95 citations Open access
OpenAlex
The Singapore National Precision Medicine Strategy
Eleanor Wong, Nicolas Bertin, Maxime Hebrard, Roberto Tirado-Magallanes +86 more
2023Nature Genetics94 citations
OpenAlex
Complete-Proteome Mapping of Human Influenza A Adaptive Mutations: Implications for Human Transmissibility of Zoonotic Strains
Olivo Miotto, A. T. Heiny, Randy A. Albrecht, Adolfo García‐Sastre +3 more
2010PLoS ONE93 citations Open access
OpenAlex
A systematic bioinformatics approach for selection of epitope-based vaccine targets
Asif M. Khan, Olivo Miotto, A. T. Heiny, Jérôme Salmon +6 more
2006Cellular Immunology90 citations Open access
OpenAlex
Modeling the structure of bound peptide ligands to major histocompatibility complex
Joo Chuan Tong, Tin Wee Tan, Shoba Ranganathan
2004Protein Science82 citations Open access
OpenAlex
Predicting host tropism of influenza A virus proteins using random forest
Christine L. P. Eng, Joo Chuan Tong, Tin Wee Tan
2014BMC Medical Genomics77 citations Open access
OpenAlex
CASVM: web server for SVM-based prediction of caspase substrates cleavage sites
Lawrence JK Wee, Tin Wee Tan, Shoba Ranganathan
2007Bioinformatics73 citations
OpenAlex
A comprehensive assessment of N-terminal signal peptides prediction methods
Khar Heng Choo, Tin Wee Tan, Shoba Ranganathan
2009BMC Bioinformatics72 citations Open access
OpenAlex
SVM-based prediction of caspase substrate cleavage sites
Lawrence JK Wee, Tin Wee Tan, Shoba Ranganathan
2006BMC Bioinformatics67 citations Open access
OpenAlex
In silicogrouping of peptide/HLA class I complexes using structural interaction characteristics
Joo Chuan Tong, Tin Wee Tan, Shoba Ranganathan
2006Bioinformatics62 citations Open access
OpenAlex
Classification of Dengue Fever Patients Based on Gene Expression Data Using Support Vector Machines
Ana Lisa do Vale Gomes, Lawrence JK Wee, Asif M. Khan, Laura H. V. G. Gil +3 more
2010PLoS ONE58 citations Open access
OpenAlex
Large-scale analysis of antigenic diversity of T-cell epitopes in dengue virus
Asif M. Khan, A. T. Heiny, Kenneth X. Lee, K.N. Srinivasan +3 more
2006BMC Bioinformatics57 citations Open access
OpenAlex
A functional significance for codon third bases
Richard J. Epstein, Kui Lin, Tin Wee Tan
2000Gene57 citations
OpenAlex
Towards precision medicine: interrogating the human genome to identify drug pathways associated with potentially functional, population-differentiated polymorphisms
Maulana Bachtiar, Brandon Nick Sern Ooi, Jingbo Wang, Yu Jin +3 more
2019The Pharmacogenomics Journal56 citations Open access
OpenAlex
Development of a clinical decision support system for diabetes care: A pilot study
Livvi Li Wei Sim, Kenneth Hon-Kim Ban, Tin Wee Tan, Sunil Kumar Sethi +1 more
2017PLoS ONE56 citations Open access
OpenAlex
Elevated acetyl‐CoA by amino acid recycling fuels microalgal neutral lipid accumulation in exponential growth phase for biofuel production
Lina Yao, Hui Shen, Nan Wang, Jaspaul Tatlay +3 more
2016Plant Biotechnology Journal52 citations Open access
OpenAlex
A proposed minimum skill set for university graduates to meet the informatics needs and challenges of the "-omics" era
Tin Wee Tan, Shen Jean Lim, Asif M. Khan, Shoba Ranganathan
2009BMC Genomics51 citations Open access
OpenAlex
T3SEdb: data warehousing of virulence effectors secreted by the bacterial Type III Secretion System
Daniel Ming Ming Tay, Kunde Ramamoorthy Govindarajan, Asif M. Khan, Terenze Yao Rui Ong +5 more
2010BMC Bioinformatics49 citations Open access
OpenAlex
Advancing standards for bioinformatics activities: persistence, reproducibility, disambiguation and Minimum Information About a Bioinformatics investigation (MIABi)
Tin Wee Tan, Joo Chuan Tong, Asif M. Khan, Mark de Silva +2 more
2010BMC Genomics48 citations Open access
OpenAlex
Prediction of HLA-DQ3.2β Ligands: evidence of multiple registers in class II binding peptides
Joo Chuan Tong, Guanglan Zhang, Tin Wee Tan, Joseph Thomas August +2 more
2006Bioinformatics45 citations Open access
OpenAlex
Towards BioDBcore: a community-defined information specification for biological databases
Pascale Gaudet, Amos Bairoch, Dawn Field, Susanna‐Assunta Sansone +34 more
2010Nucleic Acids Research40 citations Open access
OpenAlex
Grand challenges in bioinformatics education and training
Esra Büşra Işık, Michelle D. Brazas, Russell S. Schwartz, Bruno A. Gaëta +17 more
2023Nature Biotechnology38 citations
OpenAlex
MPID: MHC-Peptide Interaction Database for sequence-structure-function information on peptides binding to MHC molecules
Kunde Ramamoorthy Govindarajan, Pandjassarame Kangueane, Tin Wee Tan, Shoba Ranganathan
2003Bioinformatics38 citations Open access
OpenAlex
Predicting Zoonotic Risk of Influenza A Viruses from Host Tropism Protein Signature Using Random Forest
Christine L. P. Eng, Joo Chuan Tong, Tin Wee Tan
2017International Journal of Molecular Sciences37 citations Open access
OpenAlex
Computational Epigenetics: the new scientific paradigm
Shen Jean Lim, Tin Wee Tan, Joo Chuan Tong
2010Bioinformation37 citations Open access
OpenAlex
DEDB: a database of Drosophila melanogaster exons in splicing graph form
Bernett T. K. Lee, Tin Wee Tan, Shoba Ranganathan
2004BMC Bioinformatics34 citations Open access
OpenAlex
Coverage analysis in a targeted amplicon-based next-generation sequencing panel for myeloid neoplasms
Benedict Yan, Yongli Hu, Christopher Ng, Christopher Ng +10 more
2016Journal of Clinical Pathology33 citations
OpenAlex
Conservation and Variability of West Nile Virus Proteins
Qi Ying Koo, Asif M. Khan, Keun‐Ok Jung, Shweta Ramdas +5 more
2009PLoS ONE33 citations Open access
OpenAlex
Heat shock protein 27 overexpression in CHO cells modulates apoptosis pathways and delays activation of caspases to improve recombinant monoclonal antibody titre in fed‐batch bioreactors
Janice Gek Ling Tan, Yih Yean Lee, Tianhua Wang, Miranda G.S. Yap +2 more
2015Biotechnology Journal31 citations
OpenAlex
Rule-based knowledge aggregation for large-scale protein sequence analysis of influenza A viruses
Olivo Miotto, Tin Wee Tan, Vladimir Brusić
2008BMC Bioinformatics30 citations Open access
OpenAlex
Prediction of desmoglein-3 peptides reveals multiple shared T-cell epitopes in HLA DR4- and DR6- associated Pemphigus vulgaris
Joo Chuan Tong, Tin Wee Tan, Animesh A. Sinha, Shoba Ranganathan
2006BMC Bioinformatics29 citations Open access
OpenAlex
Supporting the curation of biological databases with reusable text mining.
Olivo Miotto, Tin Wee Tan, Vladimir Brusić
2005PubMed25 citations
OpenAlex
Towards big data science in the decade ahead from ten years of InCoB and the 1st ISCB-Asia Joint Conference
Shoba Ranganathan, Christian Schönbach, Janet F. Kelso, Burkhard Rost +2 more
2011BMC Bioinformatics24 citations Open access
OpenAlex
MPID-T
Joo Chuan Tong, Lesheng Kong, Tin Wee Tan, Shoba Ranganathan
2006Applied Bioinformatics24 citations
OpenAlex
Distinct Host Tropism Protein Signatures to Identify Possible Zoonotic Influenza A Viruses
Christine L. P. Eng, Joo Chuan Tong, Tin Wee Tan
2016PLoS ONE23 citations Open access
OpenAlex
RNA-Seq transcriptomic analysis with Bag2D software identifies key pathways enhancing lipid yield in a high lipid-producing mutant of the non-model green alga Dunaliella tertiolecta
Lina Yao, Tin Wee Tan, Yi-Kai Ng, Kenneth Hon-Kim Ban +3 more
2015Biotechnology for Biofuels22 citations Open access
OpenAlex
The S‐star trial bioinformatics course: An on‐line learning success*
Yun Ping Lim, Jan‐Olov Höög, Phyllis I. Gardner, Shoba Ranganathan +5 more
2003Biochemistry and Molecular Biology Education21 citations Open access
OpenAlex
The implementation of e-learning tools to enhance undergraduate bioinformatics teaching and learning: a case study in the National University of Singapore
Shen Jean Lim, Asif M. Khan, Mark de Silva, Kuan Siong Lim +3 more
2009BMC Bioinformatics20 citations Open access
OpenAlex
Analysis of viral diversity for vaccine target discovery
Asif M. Khan, Yongli Hu, Olivo Miotto, Natascha May Thevasagayam +5 more
2017BMC Medical Genomics19 citations Open access
OpenAlex
Dissecting the Dynamics of HIV-1 Protein Sequence Diversity
Yongli Hu, Paul Tan, Tin Wee Tan, Joseph Thomas August +1 more
2013PLoS ONE19 citations Open access
OpenAlex
West Nile Virus T-Cell Ligand Sequences Shared with Other Flaviviruses: a Multitude of Variant Sequences as Potential Altered Peptide Ligands
Keun‐Ok Jung, Asif M. Khan, Benjamin Yong Liang Tan, Yongli Hu +10 more
2012Journal of Virology18 citations Open access
OpenAlex
SYNAPSE: An international roadmap to large brain imaging
Anton P. J. Stampfl, Zhongdong Liu, Jun Hu, Kei Braz Sawada +37 more
2022Physics Reports17 citations Open access
OpenAlex
Simple re-instantiation of small databases using cloud computing
Tin Wee Tan, Chao Xie, Mark de Silva, Kuan Siong Lim +7 more
2013BMC Genomics17 citations Open access
OpenAlex
Challenges of the next decade for the Asia Pacific region: 2010 International Conference in Bioinformatics (InCoB 2010)
Shoba Ranganathan, Christian Schönbach, Kenta Nakai, Tin Wee Tan
2010BMC Genomics17 citations Open access
OpenAlex
SDPMOD: an automated comparative modeling server for small disulfide-bonded proteins
Lesheng Kong, B. T. K. Lee, J. Tong, Tin Wee Tan +1 more
2004Nucleic Acids Research17 citations Open access
OpenAlex

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20122026

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Shoba Ranganathan×21
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Shoba Ranganathan — researcher profile on SciRah
Asif M. KhanNational University of Singapore×15
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Asif M. Khan — researcher profile on SciRah
Vladimir BrusićDana-Farber Cancer Institute×12
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Vladimir Brusić — researcher profile on SciRah
Joseph Thomas AugustJohns Hopkins University

×11

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Joseph Thomas August — researcher profile on SciRah

Joo Chuan TongNational University of Singapore×11

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Joo Chuan Tong — researcher profile on SciRah

Olivo MiottoNational University of Singapore×10

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Olivo Miotto — researcher profile on SciRah

A. T. HeinyNational University of Singapore×6

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A. T. Heiny — researcher profile on SciRah

Kenneth Hon-Kim BanNational University of Singapore×5

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Kenneth Hon-Kim Ban — researcher profile on SciRah

Ernesto T. A. MarquesJohns Hopkins University×4

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Ernesto T. A. Marques — researcher profile on SciRah

Jérôme SalmonJohns Hopkins University×4

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Jérôme Salmon — researcher profile on SciRah

Shen Jean LimNational University of Singapore×4

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Shen Jean Lim — researcher profile on SciRah

Eduardo J. M. NascimentoJohns Hopkins University×3

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Eduardo J. M. Nascimento — researcher profile on SciRah

Affiliation history

Agency for Science, Technology and Research2012–2017
Prince of Songkla University2007
National University of Singapore1993–2025
Diamond Light Source2026
University of Oxford2026
National University Health System2016
Korea Bioinformation Center2007
National Supercomputing Centre Singapore2016–2023
National Center for Genetic Engineering and Biotechnology2007
Macquarie University2005–2007